RNA–Protein interactions for RNA: ENST00000485479.5

APTX-227, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,986 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-227ENST00000485479 PAOXQ6QHF9 649 aa11.03□□□□□ -0.64
APTX-227ENST00000485479 ACAD11Q709F0 780 aa11.03□□□□□ -0.64
APTX-227ENST00000485479 KIRREL3Q8IZU9 778 aa11.03□□□□□ -0.64
APTX-227ENST00000485479 MORN4Q8NDC4 146 aa11.03□□□□□ -0.64
APTX-227ENST00000485479 FBXO30Q8TB52 745 aa11.03□□□□□ -0.64
APTX-227ENST00000485479 SLC39A7Q92504 469 aa11.03□□□□□ -0.64
APTX-227ENST00000485479 LMF1Q96S06 567 aa11.03□□□□□ -0.64
APTX-227ENST00000485479 SMAD5Q99717 465 aaKnown RBP11.03□□□□□ -0.64
APTX-227ENST00000485479 HES7Q9BYE0 225 aa11.03□□□□□ -0.64
APTX-227ENST00000485479 DPY30Q9C005 99 aa11.03□□□□□ -0.64
APTX-227ENST00000485479 SLC25A18Q9H1K4 315 aa11.03□□□□□ -0.64
APTX-227ENST00000485479 OR10A5Q9H207 317 aa11.03□□□□□ -0.64
APTX-227ENST00000485479 STMN3Q9NZ72 180 aa11.03□□□□□ -0.64
APTX-227ENST00000485479 GPR45Q9Y5Y3 372 aa11.03□□□□□ -0.64
APTX-227ENST00000485479 UBDO15205 165 aa11.02□□□□□ -0.65
APTX-227ENST00000485479 VPS4BO75351 444 aa11.02□□□□□ -0.65
APTX-227ENST00000485479 ITGA10O75578 1167 aa11.02□□□□□ -0.65
APTX-227ENST00000485479 C6orf47O95873 294 aa11.02□□□□□ -0.65
APTX-227ENST00000485479 C1QCP02747 245 aa11.02□□□□□ -0.65
APTX-227ENST00000485479 ALPPP05187 535 aa11.02□□□□□ -0.65
APTX-227ENST00000485479 SOX11P35716 441 aa11.02□□□□□ -0.65
APTX-227ENST00000485479 CLDN8P56748 225 aa11.02□□□□□ -0.65
APTX-227ENST00000485479 PHC1P78364 1004 aa11.02□□□□□ -0.65
APTX-227ENST00000485479 SPRED3Q2MJR0 410 aa11.02□□□□□ -0.65
APTX-227ENST00000485479 FAM174BQ3ZCQ3 159 aa11.02□□□□□ -0.65
APTX-227ENST00000485479 CPTPQ5TA50 214 aa11.02□□□□□ -0.65
APTX-227ENST00000485479 ABHD17BQ5VST6 288 aa11.02□□□□□ -0.65
APTX-227ENST00000485479 ISLR2Q6UXK2 745 aa11.02□□□□□ -0.65
APTX-227ENST00000485479 RNF111Q6ZNA4 994 aa11.02□□□□□ -0.65
APTX-227ENST00000485479 PRR22Q8IZ63 422 aa11.02□□□□□ -0.65
APTX-227ENST00000485479 OR5AK3PQ8NH89 298 aa11.02□□□□□ -0.65
APTX-227ENST00000485479 CEP70Q8NHQ1 597 aa11.02□□□□□ -0.65
APTX-227ENST00000485479 C16orf52Q8NHV5 167 aa11.02□□□□□ -0.65
APTX-227ENST00000485479 ACTRT2Q8TDY3 377 aa11.02□□□□□ -0.65
APTX-227ENST00000485479 RILPQ96NA2 401 aa11.02□□□□□ -0.65
APTX-227ENST00000485479 ZNF317Q96PQ6 595 aaPredicted RBP11.02□□□□□ -0.65
APTX-227ENST00000485479 UBL7Q96S82 380 aaPredicted RBP11.02□□□□□ -0.65
APTX-227ENST00000485479 TMEM120AQ9BXJ8 343 aa11.02□□□□□ -0.65
APTX-227ENST00000485479 EQTNQ9NQ60 294 aa11.02□□□□□ -0.65
APTX-227ENST00000485479 PPIEQ9UNP9 301 aaKnown RBP11.02□□□□□ -0.65
APTX-227ENST00000485479 ERVK-11Q9UQG0 969 aa11.02□□□□□ -0.65
APTX-227ENST00000485479 PCDHGA9Q9Y5G4 932 aaKnown RBP11.02□□□□□ -0.65
APTX-227ENST00000485479 ATXN7O15265 892 aaPredicted RBP11.01□□□□□ -0.65
APTX-227ENST00000485479 DYRK3O43781 588 aa11.01□□□□□ -0.65
APTX-227ENST00000485479 PRPS1L1P21108 318 aa11.01□□□□□ -0.65
APTX-227ENST00000485479 MPIP34949 423 aa11.01□□□□□ -0.65
APTX-227ENST00000485479 GPC1P35052 558 aa11.01□□□□□ -0.65
APTX-227ENST00000485479 GSTM5P46439 218 aa11.01□□□□□ -0.65
APTX-227ENST00000485479 PRKAG1P54619 331 aa11.01□□□□□ -0.65
APTX-227ENST00000485479 MANFP55145 182 aaKnown RBP11.01□□□□□ -0.65
APTX-227ENST00000485479 CASP9P55211 416 aa11.01□□□□□ -0.65
APTX-227ENST00000485479 SOX8P57073 446 aa11.01□□□□□ -0.65
APTX-227ENST00000485479 ARG2P78540 354 aa11.01□□□□□ -0.65
APTX-227ENST00000485479 FUT7Q11130 342 aa11.01□□□□□ -0.65
APTX-227ENST00000485479 EBPQ15125 230 aaKnown RBP11.01□□□□□ -0.65
APTX-227ENST00000485479 CEBPEQ15744 281 aa11.01□□□□□ -0.65
APTX-227ENST00000485479 SOWAHCQ53LP3 525 aaPredicted RBP11.01□□□□□ -0.65
APTX-227ENST00000485479 CRB2Q5IJ48 1285 aa11.01□□□□□ -0.65
APTX-227ENST00000485479 C6orf163Q5TEZ5 329 aa11.01□□□□□ -0.65
APTX-227ENST00000485479 DESI1Q6ICB0 168 aa11.01□□□□□ -0.65
APTX-227ENST00000485479 SPINK14Q6IE38 97 aa11.01□□□□□ -0.65
APTX-227ENST00000485479 RPS19BP1Q86WX3 136 aaKnown RBP11.01□□□□□ -0.65
APTX-227ENST00000485479 FAM9CQ8IZT9 166 aa11.01□□□□□ -0.65
APTX-227ENST00000485479 SLC5A8Q8N695 610 aa11.01□□□□□ -0.65
APTX-227ENST00000485479 RBMXL3Q8N7X1 1067 aaKnown RBP11.01□□□□□ -0.65
APTX-227ENST00000485479 ZNF615Q8N8J6 731 aa11.01□□□□□ -0.65
APTX-227ENST00000485479 OR5M3Q8NGP4 307 aa11.01□□□□□ -0.65
APTX-227ENST00000485479 CTHRC1Q96CG8 243 aa11.01□□□□□ -0.65
APTX-227ENST00000485479 SIGLEC12Q96PQ1 595 aa11.01□□□□□ -0.65
APTX-227ENST00000485479 ITPAQ9BY32 194 aa11.01□□□□□ -0.65
APTX-227ENST00000485479 ASIC5Q9NY37 505 aa11.01□□□□□ -0.65
APTX-227ENST00000485479 ATP6V1HQ9UI12 483 aa11.01□□□□□ -0.65
APTX-227ENST00000485479 SNX8Q9Y5X2 465 aa11.01□□□□□ -0.65
APTX-227ENST00000485479 FAM208BQ5VWN6 2430 aa11.01□□□□□ -0.65
APTX-227ENST00000485479 NCF2P19878 526 aaPredicted RBP11.01□□□□□ -0.65
APTX-227ENST00000485479 CORO7P57737 925 aa11.01□□□□□ -0.65
APTX-227ENST00000485479 GNGT1P63211 74 aa11.01□□□□□ -0.65
APTX-227ENST00000485479 OC90Q02509 493 aaPredicted RBP11.01□□□□□ -0.65
APTX-227ENST00000485479 RPS6KA2Q15349 733 aa11.01□□□□□ -0.65
APTX-227ENST00000485479 DNAJC14Q6Y2X3 702 aaPredicted RBP11.01□□□□□ -0.65
APTX-227ENST00000485479 PELOQ9BRX2 385 aaKnown RBP11.01□□□□□ -0.65
APTX-227ENST00000485479 DUSP26Q9BV47 211 aa11.01□□□□□ -0.65
APTX-227ENST00000485479 WWTR1Q9GZV5 400 aa11.01□□□□□ -0.65
APTX-227ENST00000485479 CCDC134Q9H6E4 229 aa11.01□□□□□ -0.65
APTX-227ENST00000485479 TAS2R7Q9NYW3 318 aa11.01□□□□□ -0.65
APTX-227ENST00000485479 MYOTQ9UBF9 498 aa11.01□□□□□ -0.65
APTX-227ENST00000485479 COPG1Q9Y678 874 aaKnown RBP11.01□□□□□ -0.65
APTX-227ENST00000485479 EML6Q6ZMW3 1958 aa11.01□□□□□ -0.65
APTX-227ENST00000485479 SPTA1P02549 2419 aa11□□□□□ -0.65
APTX-227ENST00000485479 COL6A6A6NMZ7 2263 aa11□□□□□ -0.65
APTX-227ENST00000485479 A0A1W2PRB8 838 aa11□□□□□ -0.65
APTX-227ENST00000485479 UPK1AO00322 258 aa11□□□□□ -0.65
APTX-227ENST00000485479 CFLARO15519 480 aa11□□□□□ -0.65
APTX-227ENST00000485479 C1QL1O75973 258 aa11□□□□□ -0.65
APTX-227ENST00000485479 ZFAND5O76080 213 aa11□□□□□ -0.65
APTX-227ENST00000485479 SOX3P41225 446 aa11□□□□□ -0.65
APTX-227ENST00000485479 NR0B1P51843 470 aaKnown RBP11□□□□□ -0.65
APTX-227ENST00000485479 WNT3P56703 355 aa11□□□□□ -0.65
APTX-227ENST00000485479 MLF1P58340 268 aa11□□□□□ -0.65
APTX-227ENST00000485479 HBA1P69905 142 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms