RNA–Protein interactions for RNA: ENST00000484087.5

BRCA1-216, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 1,495 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-216ENST00000484087 SLC25A37Q9NYZ2 338 aa6.53□□□□□ -1.36
BRCA1-216ENST00000484087 RAB26Q9ULW5 256 aa6.53□□□□□ -1.36
BRCA1-216ENST00000484087 SAMD4AQ9UPU9 718 aaKnown RBP6.53□□□□□ -1.36
BRCA1-216ENST00000484087 NUP210LQ5VU65 1888 aa6.53□□□□□ -1.36
BRCA1-216ENST00000484087 TENM4Q6N022 2769 aa6.53□□□□□ -1.36
BRCA1-216ENST00000484087 IGKV1-8A0A0C4DH67 115 aa6.53□□□□□ -1.36
BRCA1-216ENST00000484087 A0A0J9YVX5 310 aa6.53□□□□□ -1.36
BRCA1-216ENST00000484087 CDC14CA4D256 554 aa6.53□□□□□ -1.36
BRCA1-216ENST00000484087 MAGEA13PA6NCF6 341 aa6.53□□□□□ -1.36
BRCA1-216ENST00000484087 URADA6NGE7 173 aa6.53□□□□□ -1.36
BRCA1-216ENST00000484087 H0YJX3 145 aa6.53□□□□□ -1.36
BRCA1-216ENST00000484087 H3BMH7 237 aa6.53□□□□□ -1.36
BRCA1-216ENST00000484087 K7EM74 188 aa6.53□□□□□ -1.36
BRCA1-216ENST00000484087 PLPP1O14494 284 aa6.53□□□□□ -1.36
BRCA1-216ENST00000484087 ATXN7O15265 892 aaPredicted RBP6.53□□□□□ -1.36
BRCA1-216ENST00000484087 ZNF749O43361 778 aa6.53□□□□□ -1.36
BRCA1-216ENST00000484087 TPST1O60507 370 aa6.53□□□□□ -1.36
BRCA1-216ENST00000484087 CPNE3O75131 537 aaKnown RBP6.53□□□□□ -1.36
BRCA1-216ENST00000484087 CNOT3O75175 753 aaKnown RBP6.53□□□□□ -1.36
BRCA1-216ENST00000484087 ALOX12BO75342 701 aa6.53□□□□□ -1.36
BRCA1-216ENST00000484087 DEAF1O75398 565 aaPredicted RBP6.53□□□□□ -1.36
BRCA1-216ENST00000484087 TIPRLO75663 272 aa6.53□□□□□ -1.36
BRCA1-216ENST00000484087 FKBP9O95302 570 aa6.53□□□□□ -1.36
BRCA1-216ENST00000484087 KRT75O95678 551 aa6.53□□□□□ -1.36
BRCA1-216ENST00000484087 LDLRP01130 860 aa6.53□□□□□ -1.36
BRCA1-216ENST00000484087 GBAP04062 536 aa6.53□□□□□ -1.36
BRCA1-216ENST00000484087 IL3P08700 152 aa6.53□□□□□ -1.36
BRCA1-216ENST00000484087 PIM1P11309 404 aaPredicted RBP6.53□□□□□ -1.36
BRCA1-216ENST00000484087 BMP2P12643 396 aa6.53□□□□□ -1.36
BRCA1-216ENST00000484087 CDKN2CP42773 168 aa6.53□□□□□ -1.36
BRCA1-216ENST00000484087 SSR2P43308 183 aa6.53□□□□□ -1.36
BRCA1-216ENST00000484087 TSFMP43897 325 aaKnown RBP6.53□□□□□ -1.36
BRCA1-216ENST00000484087 AQP4P55087 323 aa6.53□□□□□ -1.36
BRCA1-216ENST00000484087 WNT3P56703 355 aa6.53□□□□□ -1.36
BRCA1-216ENST00000484087 STXBP1P61764 594 aaKnown RBP6.53□□□□□ -1.36
BRCA1-216ENST00000484087 RPS15AP62244 130 aaKnown RBP6.53□□□□□ -1.36
BRCA1-216ENST00000484087 MRPS35P82673 323 aaKnown RBP6.53□□□□□ -1.36
BRCA1-216ENST00000484087 RGS1Q08116 209 aa6.53□□□□□ -1.36
BRCA1-216ENST00000484087 DNASE1L3Q13609 305 aa6.53□□□□□ -1.36
BRCA1-216ENST00000484087 IL11RAQ14626 422 aa6.53□□□□□ -1.36
BRCA1-216ENST00000484087 DEFB109BQ30KR1 87 aa6.53□□□□□ -1.36
BRCA1-216ENST00000484087 GTDC1Q4AE62 458 aa6.53□□□□□ -1.36
BRCA1-216ENST00000484087 LARP7Q4G0J3 582 aaKnown RBP eCLIP6.53□□□□□ -1.36
BRCA1-216ENST00000484087 SFT2D3Q587I9 215 aa6.53□□□□□ -1.36
BRCA1-216ENST00000484087 TMTC4Q5T4D3 741 aa6.53□□□□□ -1.36
BRCA1-216ENST00000484087 FAM71E1Q6IPT2 247 aa6.53□□□□□ -1.36
BRCA1-216ENST00000484087 ANKRD26P1Q6NSI1 321 aa6.53□□□□□ -1.36
BRCA1-216ENST00000484087 TLDC1Q6P9B6 456 aa6.53□□□□□ -1.36
BRCA1-216ENST00000484087 TRIM40Q6P9F5 258 aa6.53□□□□□ -1.36
BRCA1-216ENST00000484087 FAM198BQ6UWH4 519 aa6.53□□□□□ -1.36
BRCA1-216ENST00000484087 ANGPTL8Q6UXH0 198 aa6.53□□□□□ -1.36
BRCA1-216ENST00000484087 ZBTB49Q6ZSB9 765 aa6.53□□□□□ -1.36
BRCA1-216ENST00000484087 SHISA6Q6ZSJ9 500 aa6.53□□□□□ -1.36
BRCA1-216ENST00000484087 VN1R5Q7Z5H4 357 aa6.53□□□□□ -1.36
BRCA1-216ENST00000484087 CALHM3Q86XJ0 350 aa6.53□□□□□ -1.36
BRCA1-216ENST00000484087 MSRB3Q8IXL7 192 aa6.53□□□□□ -1.36
BRCA1-216ENST00000484087 KBTBD2Q8IY47 623 aa6.53□□□□□ -1.36
BRCA1-216ENST00000484087 CLECL1Q8IZS7 167 aa6.53□□□□□ -1.36
BRCA1-216ENST00000484087 EID3Q8N140 333 aa6.53□□□□□ -1.36
BRCA1-216ENST00000484087 LILRA2Q8N149 483 aa6.53□□□□□ -1.36
BRCA1-216ENST00000484087 PACRGLQ8N7B6 248 aa6.53□□□□□ -1.36
BRCA1-216ENST00000484087 ANKFN1Q8N957 763 aa6.53□□□□□ -1.36
BRCA1-216ENST00000484087 TMEM102Q8N9M5 508 aaPredicted RBP6.53□□□□□ -1.36
BRCA1-216ENST00000484087 PAPD5Q8NDF8 572 aaKnown RBP6.53□□□□□ -1.36
BRCA1-216ENST00000484087 COL26A1Q96A83 441 aa6.53□□□□□ -1.36
BRCA1-216ENST00000484087 SLCO4A1Q96BD0 722 aa6.53□□□□□ -1.36
BRCA1-216ENST00000484087 MIEF2Q96C03 454 aa6.53□□□□□ -1.36
BRCA1-216ENST00000484087 F2RL3Q96RI0 385 aa6.53□□□□□ -1.36
BRCA1-216ENST00000484087 SEPHS2Q99611 448 aa6.53□□□□□ -1.36
BRCA1-216ENST00000484087 DPH7Q9BTV6 452 aa6.53□□□□□ -1.36
BRCA1-216ENST00000484087 SARGQ9BW04 601 aa6.53□□□□□ -1.36
BRCA1-216ENST00000484087 CHID1Q9BWS9 393 aa6.53□□□□□ -1.36
BRCA1-216ENST00000484087 TWSG1Q9GZX9 223 aa6.53□□□□□ -1.36
BRCA1-216ENST00000484087 SEMA6AQ9H2E6 1030 aa6.53□□□□□ -1.36
BRCA1-216ENST00000484087 RPF2Q9H7B2 306 aaKnown RBP6.53□□□□□ -1.36
BRCA1-216ENST00000484087 TPT1P8Q9HAU6 139 aa6.53□□□□□ -1.36
BRCA1-216ENST00000484087 ANKMY1Q9P2S6 941 aa6.53□□□□□ -1.36
BRCA1-216ENST00000484087 RPS6KA6Q9UK32 745 aa6.53□□□□□ -1.36
BRCA1-216ENST00000484087 AP1M2Q9Y6Q5 423 aa6.53□□□□□ -1.36
BRCA1-216ENST00000484087 SCN2AQ99250 2005 aa6.53□□□□□ -1.36
BRCA1-216ENST00000484087 SCN3AQ9NY46 2000 aa6.53□□□□□ -1.36
BRCA1-216ENST00000484087 ZNF462Q96JM2 2506 aa6.53□□□□□ -1.36
BRCA1-216ENST00000484087 TLN1Q9Y490 2541 aaKnown RBP6.52□□□□□ -1.37
BRCA1-216ENST00000484087 LOC105369274A0A096LPK9 316 aa6.52□□□□□ -1.37
BRCA1-216ENST00000484087 LOC102723532A0A0G2JNH3 316 aa6.52□□□□□ -1.37
BRCA1-216ENST00000484087 RNF103-CHMP3A0A140T963 221 aa6.52□□□□□ -1.37
BRCA1-216ENST00000484087 A0A1W2PRB8 838 aa6.52□□□□□ -1.37
BRCA1-216ENST00000484087 TCRBV5S2A0A599 114 aa6.52□□□□□ -1.37
BRCA1-216ENST00000484087 LRIT2A6NDA9 550 aa6.52□□□□□ -1.37
BRCA1-216ENST00000484087 ERVH48-1M5A8F1 160 aa6.52□□□□□ -1.37
BRCA1-216ENST00000484087 GNGT2O14610 69 aa6.52□□□□□ -1.37
BRCA1-216ENST00000484087 PRICKLE3O43900 615 aaPredicted RBP6.52□□□□□ -1.37
BRCA1-216ENST00000484087 TBX19O60806 448 aa6.52□□□□□ -1.37
BRCA1-216ENST00000484087 SCN2BO60939 215 aa6.52□□□□□ -1.37
BRCA1-216ENST00000484087 CREG1O75629 220 aa6.52□□□□□ -1.37
BRCA1-216ENST00000484087 OR2B3O76000 313 aa6.52□□□□□ -1.37
BRCA1-216ENST00000484087 EIF2S1P05198 315 aaKnown RBP6.52□□□□□ -1.37
BRCA1-216ENST00000484087 ABCB1P08183 1280 aaPredicted RBP6.52□□□□□ -1.37
BRCA1-216ENST00000484087 SLC35G6P0C7Q6 338 aa6.52□□□□□ -1.37
BRCA1-216ENST00000484087 DRD2P14416 443 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms