RNA–Protein interactions for RNA: ENST00000482590.1

CLK1-212, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 626 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-212ENST00000482590 SERPINA12Q8IW75 414 aa6.18□□□□□ -1.42
CLK1-212ENST00000482590 UMODL1-AS1Q8N2C9 162 aa6.18□□□□□ -1.42
CLK1-212ENST00000482590 PDPRQ8NCN5 879 aa6.18□□□□□ -1.42
CLK1-212ENST00000482590 CCNYQ8ND76 341 aa6.18□□□□□ -1.42
CLK1-212ENST00000482590 OR56A4Q8NGH8 313 aa6.18□□□□□ -1.42
CLK1-212ENST00000482590 HCAR2Q8TDS4 363 aa6.18□□□□□ -1.42
CLK1-212ENST00000482590 SCARB1Q8WTV0 552 aa6.18□□□□□ -1.42
CLK1-212ENST00000482590 EXT2Q93063 718 aa6.18□□□□□ -1.42
CLK1-212ENST00000482590 SNRNP40Q96DI7 357 aaKnown RBP6.18□□□□□ -1.42
CLK1-212ENST00000482590 C11orf24Q96F05 449 aaPredicted RBP6.18□□□□□ -1.42
CLK1-212ENST00000482590 HS6ST2Q96MM7 605 aa6.18□□□□□ -1.42
CLK1-212ENST00000482590 CDRT15Q96T59 188 aa6.18□□□□□ -1.42
CLK1-212ENST00000482590 MMP27Q9H306 513 aa6.18□□□□□ -1.42
CLK1-212ENST00000482590 LRRN3Q9H3W5 708 aa6.18□□□□□ -1.42
CLK1-212ENST00000482590 GSTO2Q9H4Y5 243 aa6.18□□□□□ -1.42
CLK1-212ENST00000482590 ATP13A3Q9H7F0 1226 aa6.18□□□□□ -1.42
CLK1-212ENST00000482590 CXorf36Q9H7Y0 433 aa6.18□□□□□ -1.42
CLK1-212ENST00000482590 KLC4Q9NSK0 619 aa6.18□□□□□ -1.42
CLK1-212ENST00000482590 CHMP5Q9NZZ3 219 aa6.18□□□□□ -1.42
CLK1-212ENST00000482590 KIAA1456Q9P272 454 aa6.18□□□□□ -1.42
CLK1-212ENST00000482590 HEY2Q9UBP5 337 aa6.18□□□□□ -1.42
CLK1-212ENST00000482590 LHX3Q9UBR4 397 aa6.18□□□□□ -1.42
CLK1-212ENST00000482590 CNOT8Q9UFF9 292 aaKnown RBP6.18□□□□□ -1.42
CLK1-212ENST00000482590 KCNN3Q9UGI6 736 aa6.18□□□□□ -1.42
CLK1-212ENST00000482590 BAIAP2L1Q9UHR4 511 aa6.18□□□□□ -1.42
CLK1-212ENST00000482590 KCNE5Q9UJ90 142 aa6.18□□□□□ -1.42
CLK1-212ENST00000482590 RIMKLBQ9ULI2 386 aa6.18□□□□□ -1.42
CLK1-212ENST00000482590 FZD10Q9ULW2 581 aa6.18□□□□□ -1.42
CLK1-212ENST00000482590 CLEC4AQ9UMR7 237 aa6.18□□□□□ -1.42
CLK1-212ENST00000482590 OR1A2Q9Y585 309 aa6.18□□□□□ -1.42
CLK1-212ENST00000482590 MAB21L2Q9Y586 359 aa6.18□□□□□ -1.42
CLK1-212ENST00000482590 HECTD1Q9ULT8 2610 aa6.18□□□□□ -1.42
CLK1-212ENST00000482590 BSNQ9UPA5 3926 aa6.18□□□□□ -1.42
CLK1-212ENST00000482590 DOPEY2Q9Y3R5 2298 aa6.17□□□□□ -1.42
CLK1-212ENST00000482590 A0A087WZY1 265 aa6.17□□□□□ -1.42
CLK1-212ENST00000482590 A0A0A6YYC8 382 aaPredicted RBP6.17□□□□□ -1.42
CLK1-212ENST00000482590 CGB1A6NKQ9 187 aa6.17□□□□□ -1.42
CLK1-212ENST00000482590 SIGLEC16A6NMB1 481 aa6.17□□□□□ -1.42
CLK1-212ENST00000482590 USP17L23D6RBM5 183 aa6.17□□□□□ -1.42
CLK1-212ENST00000482590 I3L1I5 382 aaPredicted RBP6.17□□□□□ -1.42
CLK1-212ENST00000482590 EPHB6O15197 1021 aa6.17□□□□□ -1.42
CLK1-212ENST00000482590 ZW10O43264 779 aa6.17□□□□□ -1.42
CLK1-212ENST00000482590 PRAMEF11O60813 436 aa6.17□□□□□ -1.42
CLK1-212ENST00000482590 GPANK1O95872 356 aa6.17□□□□□ -1.42
CLK1-212ENST00000482590 BCL10O95999 233 aa6.17□□□□□ -1.42
CLK1-212ENST00000482590 PRKCGP05129 697 aa6.17□□□□□ -1.42
CLK1-212ENST00000482590 SERPING1P05155 500 aa6.17□□□□□ -1.42
CLK1-212ENST00000482590 CCDC172P0C7W6 258 aa6.17□□□□□ -1.42
CLK1-212ENST00000482590 CHRNB2P17787 502 aa6.17□□□□□ -1.42
CLK1-212ENST00000482590 SLC6A2P23975 617 aa6.17□□□□□ -1.42
CLK1-212ENST00000482590 PSMA2P25787 234 aa6.17□□□□□ -1.42
CLK1-212ENST00000482590 PRKAR1BP31321 381 aa6.17□□□□□ -1.42
CLK1-212ENST00000482590 WNT5AP41221 380 aa6.17□□□□□ -1.42
CLK1-212ENST00000482590 ARHGAP25P42331 645 aa6.17□□□□□ -1.42
CLK1-212ENST00000482590 NDST2P52849 883 aa6.17□□□□□ -1.42
CLK1-212ENST00000482590 TAS2R50P59544 299 aa6.17□□□□□ -1.42
CLK1-212ENST00000482590 POLR2LP62875 67 aaKnown RBP6.17□□□□□ -1.42
CLK1-212ENST00000482590 CCL7P80098 99 aa6.17□□□□□ -1.42
CLK1-212ENST00000482590 TAP2Q03519 686 aa6.17□□□□□ -1.42
CLK1-212ENST00000482590 ACSM2AQ08AH3 577 aa6.17□□□□□ -1.42
CLK1-212ENST00000482590 ZNF235Q14590 738 aa6.17□□□□□ -1.42
CLK1-212ENST00000482590 C14orf28Q4W4Y0 310 aa6.17□□□□□ -1.42
CLK1-212ENST00000482590 MANEAQ5SRI9 462 aa6.17□□□□□ -1.42
CLK1-212ENST00000482590 CERCAMQ5T4B2 595 aa6.17□□□□□ -1.42
CLK1-212ENST00000482590 LCE1AQ5T7P2 110 aa6.17□□□□□ -1.42
CLK1-212ENST00000482590 ACSM2BQ68CK6 577 aa6.17□□□□□ -1.42
CLK1-212ENST00000482590 MON1BQ7L1V2 547 aa6.17□□□□□ -1.42
CLK1-212ENST00000482590 CAND1Q86VP6 1230 aaKnown RBP6.17□□□□□ -1.42
CLK1-212ENST00000482590 ZNF573Q86YE8 665 aa6.17□□□□□ -1.42
CLK1-212ENST00000482590 DENND6AQ8IWF6 608 aa6.17□□□□□ -1.42
CLK1-212ENST00000482590 Q8N9G6 341 aaPredicted RBP6.17□□□□□ -1.42
CLK1-212ENST00000482590 RNASE8Q8TDE3 154 aaKnown RBP6.17□□□□□ -1.42
CLK1-212ENST00000482590 ELP5Q8TE02 316 aa6.17□□□□□ -1.42
CLK1-212ENST00000482590 C17orf50Q8WW18 174 aa6.17□□□□□ -1.42
CLK1-212ENST00000482590 TMEM159Q96B96 161 aa6.17□□□□□ -1.42
CLK1-212ENST00000482590 NUS1Q96E22 293 aa6.17□□□□□ -1.42
CLK1-212ENST00000482590 C19orf60Q96EN9 201 aa6.17□□□□□ -1.42
CLK1-212ENST00000482590 PTCD3Q96EY7 689 aaKnown RBP6.17□□□□□ -1.42
CLK1-212ENST00000482590 TPD52L3Q96J77 140 aa6.17□□□□□ -1.42
CLK1-212ENST00000482590 CELF6Q96J87 481 aaKnown RBP6.17□□□□□ -1.42
CLK1-212ENST00000482590 ZNF641Q96N77 438 aaPredicted RBP6.17□□□□□ -1.42
CLK1-212ENST00000482590 PCDHB18PQ96TA0 734 aa6.17□□□□□ -1.42
CLK1-212ENST00000482590 CMKLR1Q99788 373 aa6.17□□□□□ -1.42
CLK1-212ENST00000482590 AGPAT1Q99943 283 aa6.17□□□□□ -1.42
CLK1-212ENST00000482590 CNPY3Q9BT09 278 aa6.17□□□□□ -1.42
CLK1-212ENST00000482590 H2AFJQ9BTM1 129 aa6.17□□□□□ -1.42
CLK1-212ENST00000482590 ABHD6Q9BV23 337 aa6.17□□□□□ -1.42
CLK1-212ENST00000482590 TRIM2Q9C040 744 aa6.17□□□□□ -1.42
CLK1-212ENST00000482590 RAB17Q9H0T7 212 aa6.17□□□□□ -1.42
CLK1-212ENST00000482590 DPEP2Q9H4A9 486 aa6.17□□□□□ -1.42
CLK1-212ENST00000482590 DHX35Q9H5Z1 703 aaKnown RBP6.17□□□□□ -1.42
CLK1-212ENST00000482590 CLMPQ9H6B4 373 aa6.17□□□□□ -1.42
CLK1-212ENST00000482590 NOL11Q9H8H0 719 aaKnown RBP6.17□□□□□ -1.42
CLK1-212ENST00000482590 PDFQ9HBH1 243 aa6.17□□□□□ -1.42
CLK1-212ENST00000482590 FGF22Q9HCT0 170 aa6.17□□□□□ -1.42
CLK1-212ENST00000482590 RANGRFQ9HD47 186 aaPredicted RBP6.17□□□□□ -1.42
CLK1-212ENST00000482590 GPATCH2LQ9NWQ4 482 aa6.17□□□□□ -1.42
CLK1-212ENST00000482590 SLC17A6Q9P2U8 582 aa6.17□□□□□ -1.42
CLK1-212ENST00000482590 SNX7Q9UNH6 387 aa6.17□□□□□ -1.42
CLK1-212ENST00000482590 COPG1Q9Y678 874 aaKnown RBP6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms