RNA–Protein interactions for RNA: ENST00000482158.1

SF3B1-210, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 772 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-210ENST00000482158 TMEM44Q2T9K0 475 aa4.5□□□□□ -1.69
SF3B1-210ENST00000482158 ANKRD55Q3KP44 614 aa4.5□□□□□ -1.69
SF3B1-210ENST00000482158 PARP10Q53GL7 1025 aa4.5□□□□□ -1.69
SF3B1-210ENST00000482158 TCTEX1D4Q5JR98 221 aa4.5□□□□□ -1.69
SF3B1-210ENST00000482158 TCHHL1Q5QJ38 904 aaPredicted RBP4.5□□□□□ -1.69
SF3B1-210ENST00000482158 LIPKQ5VXJ0 399 aa4.5□□□□□ -1.69
SF3B1-210ENST00000482158 LEMD1Q68G75 181 aa4.5□□□□□ -1.69
SF3B1-210ENST00000482158 ASRGL1Q7L266 308 aa4.5□□□□□ -1.69
SF3B1-210ENST00000482158 MRPL43Q8N983 215 aaKnown RBP4.5□□□□□ -1.69
SF3B1-210ENST00000482158 FAM222BQ8WU58 562 aa4.5□□□□□ -1.69
SF3B1-210ENST00000482158 MRPL38Q96DV4 380 aaKnown RBP4.5□□□□□ -1.69
SF3B1-210ENST00000482158 FTHL17Q9BXU8 183 aa4.5□□□□□ -1.69
SF3B1-210ENST00000482158 NLNQ9BYT8 704 aa4.5□□□□□ -1.69
SF3B1-210ENST00000482158 TAS2R16Q9NYV7 291 aa4.5□□□□□ -1.69
SF3B1-210ENST00000482158 CCPG1Q9ULG6 757 aa4.5□□□□□ -1.69
SF3B1-210ENST00000482158 ZNF175Q9Y473 711 aa4.5□□□□□ -1.69
SF3B1-210ENST00000482158 CSAG2Q9Y5P2 127 aa4.5□□□□□ -1.69
SF3B1-210ENST00000482158 ARHGAP42A6NI28 874 aa4.49□□□□□ -1.69
SF3B1-210ENST00000482158 PDGFBP01127 241 aaPredicted RBP4.49□□□□□ -1.69
SF3B1-210ENST00000482158 PROS1P07225 676 aa4.49□□□□□ -1.69
SF3B1-210ENST00000482158 ETS1P14921 441 aa4.49□□□□□ -1.69
SF3B1-210ENST00000482158 CYP11B1P15538 503 aa4.49□□□□□ -1.69
SF3B1-210ENST00000482158 GNSP15586 552 aa4.49□□□□□ -1.69
SF3B1-210ENST00000482158 GAP43P17677 238 aa4.49□□□□□ -1.69
SF3B1-210ENST00000482158 IL1RL1Q01638 556 aa4.49□□□□□ -1.69
SF3B1-210ENST00000482158 ZSWIM7Q19AV6 140 aa4.49□□□□□ -1.69
SF3B1-210ENST00000482158 C17orf58Q2M2W7 97 aa4.49□□□□□ -1.69
SF3B1-210ENST00000482158 AGKQ53H12 422 aa4.49□□□□□ -1.69
SF3B1-210ENST00000482158 ZNF506Q5JVG8 444 aa4.49□□□□□ -1.69
SF3B1-210ENST00000482158 DDI2Q5TDH0 399 aa4.49□□□□□ -1.69
SF3B1-210ENST00000482158 AGAP7PQ5VUJ5 663 aa4.49□□□□□ -1.69
SF3B1-210ENST00000482158 CNSTQ6PJW8 725 aa4.49□□□□□ -1.69
SF3B1-210ENST00000482158 SLC25A42Q86VD7 318 aa4.49□□□□□ -1.69
SF3B1-210ENST00000482158 AMZ2Q86W34 360 aa4.49□□□□□ -1.69
SF3B1-210ENST00000482158 FGFRL1Q8N441 504 aa4.49□□□□□ -1.69
SF3B1-210ENST00000482158 LRRC17Q8N6Y2 441 aa4.49□□□□□ -1.69
SF3B1-210ENST00000482158 POM121L12Q8N7R1 296 aa4.49□□□□□ -1.69
SF3B1-210ENST00000482158 COLGALT1Q8NBJ5 622 aa4.49□□□□□ -1.69
SF3B1-210ENST00000482158 LEMD2Q8NC56 503 aa4.49□□□□□ -1.69
SF3B1-210ENST00000482158 TMEM37Q8WXS4 190 aa4.49□□□□□ -1.69
SF3B1-210ENST00000482158 RAB11FIP5Q9BXF6 653 aa4.49□□□□□ -1.69
SF3B1-210ENST00000482158 HSD3B7Q9H2F3 369 aa4.49□□□□□ -1.69
SF3B1-210ENST00000482158 SP140LQ9H930 580 aa4.49□□□□□ -1.69
SF3B1-210ENST00000482158 NRN1Q9NPD7 142 aa4.49□□□□□ -1.69
SF3B1-210ENST00000482158 HOMER3Q9NSC5 361 aa4.49□□□□□ -1.69
SF3B1-210ENST00000482158 CNOT2Q9NZN8 540 aaKnown RBP4.49□□□□□ -1.69
SF3B1-210ENST00000482158 EIF3KQ9UBQ5 218 aaKnown RBP4.49□□□□□ -1.69
SF3B1-210ENST00000482158 KLF2Q9Y5W3 355 aaPredicted RBP4.49□□□□□ -1.69
SF3B1-210ENST00000482158 SYNJ2O15056 1496 aa4.49□□□□□ -1.69
SF3B1-210ENST00000482158 AFF2P51816 1311 aa4.48□□□□□ -1.69
SF3B1-210ENST00000482158 HCFC1P51610 2035 aa4.48□□□□□ -1.69
SF3B1-210ENST00000482158 FOXI3A8MTJ6 420 aaPredicted RBP4.48□□□□□ -1.69
SF3B1-210ENST00000482158 E2F3O00716 465 aa4.48□□□□□ -1.69
SF3B1-210ENST00000482158 SLC6A8P48029 635 aa4.48□□□□□ -1.69
SF3B1-210ENST00000482158 PGFP49763 221 aa4.48□□□□□ -1.69
SF3B1-210ENST00000482158 ATXN3P54252 364 aaPredicted RBP4.48□□□□□ -1.69
SF3B1-210ENST00000482158 ZFP36L1Q07352 338 aaKnown RBP4.48□□□□□ -1.69
SF3B1-210ENST00000482158 FUT7Q11130 342 aa4.48□□□□□ -1.69
SF3B1-210ENST00000482158 CARTPTQ16568 116 aa4.48□□□□□ -1.69
SF3B1-210ENST00000482158 ZNF699Q32M78 642 aa4.48□□□□□ -1.69
SF3B1-210ENST00000482158 KRTAP27-1Q3LI81 207 aa4.48□□□□□ -1.69
SF3B1-210ENST00000482158 LINC00242Q5T6M2 205 aa4.48□□□□□ -1.69
SF3B1-210ENST00000482158 ARMCX5Q6P1M9 558 aa4.48□□□□□ -1.69
SF3B1-210ENST00000482158 FAM159AQ6UWV7 190 aa4.48□□□□□ -1.69
SF3B1-210ENST00000482158 LRRC49Q8IUZ0 686 aa4.48□□□□□ -1.69
SF3B1-210ENST00000482158 ITLN1Q8WWA0 313 aa4.48□□□□□ -1.69
SF3B1-210ENST00000482158 PHYHIPQ92561 330 aa4.48□□□□□ -1.69
SF3B1-210ENST00000482158 RAB3CQ96E17 227 aa4.48□□□□□ -1.69
SF3B1-210ENST00000482158 SAMD8Q96LT4 415 aa4.48□□□□□ -1.69
SF3B1-210ENST00000482158 NSMCE2Q96MF7 247 aa4.48□□□□□ -1.69
SF3B1-210ENST00000482158 CPXM1Q96SM3 734 aa4.48□□□□□ -1.69
SF3B1-210ENST00000482158 TTYH2Q9BSA4 534 aa4.48□□□□□ -1.69
SF3B1-210ENST00000482158 UBXN6Q9BZV1 441 aa4.48□□□□□ -1.69
SF3B1-210ENST00000482158 IL20RAQ9UHF4 553 aa4.48□□□□□ -1.69
SF3B1-210ENST00000482158 PIN4Q9Y237 131 aaKnown RBP4.48□□□□□ -1.69
SF3B1-210ENST00000482158 PLEKHA6Q9Y2H5 1048 aa4.48□□□□□ -1.69
SF3B1-210ENST00000482158 UBE4BO95155 1302 aa4.47□□□□□ -1.69
SF3B1-210ENST00000482158 RALGAPA1Q6GYQ0 2036 aa4.47□□□□□ -1.69
SF3B1-210ENST00000482158 A0A1B0GTH9 108 aa4.47□□□□□ -1.69
SF3B1-210ENST00000482158 KRT87PA6NCN2 255 aa4.47□□□□□ -1.69
SF3B1-210ENST00000482158 TGFAP01135 160 aa4.47□□□□□ -1.69
SF3B1-210ENST00000482158 MT-ND1P03886 318 aa4.47□□□□□ -1.69
SF3B1-210ENST00000482158 FCGR3AP08637 254 aa4.47□□□□□ -1.69
SF3B1-210ENST00000482158 CCDC192P0DO97 292 aa4.47□□□□□ -1.69
SF3B1-210ENST00000482158 ACADSP16219 412 aa4.47□□□□□ -1.69
SF3B1-210ENST00000482158 UCP1P25874 307 aa4.47□□□□□ -1.69
SF3B1-210ENST00000482158 RPA1P27694 616 aa4.47□□□□□ -1.69
SF3B1-210ENST00000482158 SGSHP51688 502 aa4.47□□□□□ -1.69
SF3B1-210ENST00000482158 LMO4P61968 165 aa4.47□□□□□ -1.69
SF3B1-210ENST00000482158 CCDC40Q4G0X9 1142 aa4.47□□□□□ -1.69
SF3B1-210ENST00000482158 VWA2Q5GFL6 755 aa4.47□□□□□ -1.69
SF3B1-210ENST00000482158 ZCCHC12Q6PEW1 402 aa4.47□□□□□ -1.69
SF3B1-210ENST00000482158 MOB2Q70IA6 237 aa4.47□□□□□ -1.69
SF3B1-210ENST00000482158 KDM8Q8N371 416 aa4.47□□□□□ -1.69
SF3B1-210ENST00000482158 HDDC3Q8N4P3 179 aa4.47□□□□□ -1.69
SF3B1-210ENST00000482158 GPATCH11Q8N954 259 aa4.47□□□□□ -1.69
SF3B1-210ENST00000482158 SUMF1Q8NBK3 374 aa4.47□□□□□ -1.69
SF3B1-210ENST00000482158 ZNF397Q8NF99 534 aaPredicted RBP4.47□□□□□ -1.69
SF3B1-210ENST00000482158 DQX1Q8TE96 717 aaKnown RBP4.47□□□□□ -1.69
SF3B1-210ENST00000482158 BIRC7Q96CA5 298 aa4.47□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms