RNA–Protein interactions for RNA: ENST00000481999.1

CHD3-211, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 2,515 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-211ENST00000481999 PRAMEF26H0Y7S4 382 aa13.64□□□□□ -0.23
CHD3-211ENST00000481999 BOLA2-SMG1P6H3BVE0 249 aa13.64□□□□□ -0.23
CHD3-211ENST00000481999 HOXC4P09017 264 aaPredicted RBP13.64□□□□□ -0.23
CHD3-211ENST00000481999 PORP16435 677 aaPredicted RBP13.64□□□□□ -0.23
CHD3-211ENST00000481999 DGKEP52429 567 aa13.64□□□□□ -0.23
CHD3-211ENST00000481999 VBP1P61758 197 aa13.64□□□□□ -0.23
CHD3-211ENST00000481999 SELENOWP63302 87 aa13.64□□□□□ -0.23
CHD3-211ENST00000481999 RELAQ04206 551 aa13.64□□□□□ -0.23
CHD3-211ENST00000481999 FADDQ13158 208 aa13.64□□□□□ -0.23
CHD3-211ENST00000481999 SRSF5Q13243 272 aaKnown RBP13.64□□□□□ -0.23
CHD3-211ENST00000481999 SPDYE7PQ495Y7 208 aa13.64□□□□□ -0.23
CHD3-211ENST00000481999 DEFB134Q4QY38 66 aa13.64□□□□□ -0.23
CHD3-211ENST00000481999 P3H2Q8IVL5 708 aa13.64□□□□□ -0.23
CHD3-211ENST00000481999 ENTHD1Q8IYW4 607 aa13.64□□□□□ -0.23
CHD3-211ENST00000481999 DYNC2LI1Q8TCX1 351 aa13.64□□□□□ -0.23
CHD3-211ENST00000481999 SLC38A5Q8WUX1 472 aa13.64□□□□□ -0.23
CHD3-211ENST00000481999 FCGR1BQ92637 280 aa13.64□□□□□ -0.23
CHD3-211ENST00000481999 MTERF3Q96E29 417 aa13.64□□□□□ -0.23
CHD3-211ENST00000481999 RHCGQ9UBD6 479 aa13.64□□□□□ -0.23
CHD3-211ENST00000481999 SPTY2D1-AS1A0A0U1RR47 76 aa13.63□□□□□ -0.23
CHD3-211ENST00000481999 OR2A25A4D2G3 310 aa13.63□□□□□ -0.23
CHD3-211ENST00000481999 B4DGG1 531 aa13.63□□□□□ -0.23
CHD3-211ENST00000481999 TOR1BO14657 336 aa13.63□□□□□ -0.23
CHD3-211ENST00000481999 KCNJ13O60928 360 aa13.63□□□□□ -0.23
CHD3-211ENST00000481999 VIPP01282 170 aa13.63□□□□□ -0.23
CHD3-211ENST00000481999 WNT1P04628 370 aa13.63□□□□□ -0.23
CHD3-211ENST00000481999 IMPDH2P12268 514 aa13.63□□□□□ -0.23
CHD3-211ENST00000481999 NCBP2P52298 156 aaKnown RBP eCLIP13.63□□□□□ -0.23
CHD3-211ENST00000481999 LSM3P62310 102 aaKnown RBP13.63□□□□□ -0.23
CHD3-211ENST00000481999 GANABQ14697 944 aaKnown RBP13.63□□□□□ -0.23
CHD3-211ENST00000481999 SLC9A5Q14940 896 aa13.63□□□□□ -0.23
CHD3-211ENST00000481999 MAPK11Q15759 364 aa13.63□□□□□ -0.23
CHD3-211ENST00000481999 DEFB110Q30KQ9 67 aa13.63□□□□□ -0.23
CHD3-211ENST00000481999 UBE2UQ5VVX9 321 aa13.63□□□□□ -0.23
CHD3-211ENST00000481999 FCRL6Q6DN72 434 aa13.63□□□□□ -0.23
CHD3-211ENST00000481999 AHSA2Q719I0 299 aa13.63□□□□□ -0.23
CHD3-211ENST00000481999 C6orf120Q7Z4R8 191 aa13.63□□□□□ -0.23
CHD3-211ENST00000481999 OR4N5Q8IXE1 308 aa13.63□□□□□ -0.23
CHD3-211ENST00000481999 OR2L5Q8NG80 312 aa13.63□□□□□ -0.23
CHD3-211ENST00000481999 SUN3Q8TAQ9 357 aa13.63□□□□□ -0.23
CHD3-211ENST00000481999 PHF10Q8WUB8 498 aaKnown RBP13.63□□□□□ -0.23
CHD3-211ENST00000481999 APH1BQ8WW43 257 aa13.63□□□□□ -0.23
CHD3-211ENST00000481999 RSC1A1Q92681 617 aa13.63□□□□□ -0.23
CHD3-211ENST00000481999 UBE2FQ969M7 185 aa13.63□□□□□ -0.23
CHD3-211ENST00000481999 NLNQ9BYT8 704 aa13.63□□□□□ -0.23
CHD3-211ENST00000481999 NT5DC2Q9H857 520 aa13.63□□□□□ -0.23
CHD3-211ENST00000481999 TRNAU1APQ9NX07 287 aaKnown RBP13.63□□□□□ -0.23
CHD3-211ENST00000481999 NDUFAF4Q9P032 175 aa13.63□□□□□ -0.23
CHD3-211ENST00000481999 PCDHGA6Q9Y5G7 932 aa13.63□□□□□ -0.23
CHD3-211ENST00000481999 HEBP2Q9Y5Z4 205 aa13.63□□□□□ -0.23
CHD3-211ENST00000481999 CLDN24A6NM45 220 aa13.63□□□□□ -0.23
CHD3-211ENST00000481999 C10orf142B7Z368 130 aa13.63□□□□□ -0.23
CHD3-211ENST00000481999 TNFRSF11BO00300 401 aa13.63□□□□□ -0.23
CHD3-211ENST00000481999 MAN2B1O00754 1011 aa13.63□□□□□ -0.23
CHD3-211ENST00000481999 RECKO95980 971 aa13.63□□□□□ -0.23
CHD3-211ENST00000481999 CDH3P22223 829 aa13.63□□□□□ -0.23
CHD3-211ENST00000481999 ALDH4A1P30038 563 aa13.63□□□□□ -0.23
CHD3-211ENST00000481999 RPL3P39023 403 aaKnown RBP13.63□□□□□ -0.23
CHD3-211ENST00000481999 RBBP4Q09028 425 aa13.63□□□□□ -0.23
CHD3-211ENST00000481999 ELOAQ14241 798 aaKnown RBP13.63□□□□□ -0.23
CHD3-211ENST00000481999 OXA1LQ15070 435 aa13.63□□□□□ -0.23
CHD3-211ENST00000481999 LTB4RQ15722 352 aa13.63□□□□□ -0.23
CHD3-211ENST00000481999 SMAD2Q15796 467 aaKnown RBP13.63□□□□□ -0.23
CHD3-211ENST00000481999 Q6ZPB1 254 aaPredicted RBP13.63□□□□□ -0.23
CHD3-211ENST00000481999 SYT13Q7L8C5 426 aa13.63□□□□□ -0.23
CHD3-211ENST00000481999 RBM12BQ8IXT5 1001 aaKnown RBP13.63□□□□□ -0.23
CHD3-211ENST00000481999 FAM46DQ8NEK8 389 aa13.63□□□□□ -0.23
CHD3-211ENST00000481999 AMDHD1Q96NU7 426 aa13.63□□□□□ -0.23
CHD3-211ENST00000481999 KCNC2Q96PR1 638 aa13.63□□□□□ -0.23
CHD3-211ENST00000481999 MROQ9BYG7 248 aa13.63□□□□□ -0.23
CHD3-211ENST00000481999 ACTR10Q9NZ32 417 aa13.63□□□□□ -0.23
CHD3-211ENST00000481999 SELENONQ9NZV5 590 aa13.63□□□□□ -0.23
CHD3-211ENST00000481999 LYVE1Q9Y5Y7 322 aa13.63□□□□□ -0.23
CHD3-211ENST00000481999 PCDH15Q96QU1 1955 aa13.63□□□□□ -0.23
CHD3-211ENST00000481999 IGHV1OR15-9A0A0B4J2B8 117 aa13.62□□□□□ -0.23
CHD3-211ENST00000481999 FAM227AF5H4B4 570 aa13.62□□□□□ -0.23
CHD3-211ENST00000481999 TNFRSF10CO14798 259 aa13.62□□□□□ -0.23
CHD3-211ENST00000481999 UQCRC2P22695 453 aa13.62□□□□□ -0.23
CHD3-211ENST00000481999 GPC1P35052 558 aa13.62□□□□□ -0.23
CHD3-211ENST00000481999 GGT2P36268 569 aa13.62□□□□□ -0.23
CHD3-211ENST00000481999 RABIFP47224 123 aa13.62□□□□□ -0.23
CHD3-211ENST00000481999 DSTNP60981 165 aa13.62□□□□□ -0.23
CHD3-211ENST00000481999 ID2Q02363 134 aa13.62□□□□□ -0.23
CHD3-211ENST00000481999 IFI44LQ53G44 452 aa13.62□□□□□ -0.23
CHD3-211ENST00000481999 PTCRAQ6ISU1 281 aaPredicted RBP13.62□□□□□ -0.23
CHD3-211ENST00000481999 TRIM40Q6P9F5 258 aa13.62□□□□□ -0.23
CHD3-211ENST00000481999 TMEM107Q6UX40 140 aa13.62□□□□□ -0.23
CHD3-211ENST00000481999 BTLAQ7Z6A9 289 aa13.62□□□□□ -0.23
CHD3-211ENST00000481999 COMTD1Q86VU5 262 aa13.62□□□□□ -0.23
CHD3-211ENST00000481999 OR6Q1Q8NGQ2 317 aa13.62□□□□□ -0.23
CHD3-211ENST00000481999 LGALS12Q96DT0 336 aa13.62□□□□□ -0.23
CHD3-211ENST00000481999 ALPK1Q96QP1 1244 aa13.62□□□□□ -0.23
CHD3-211ENST00000481999 EQTNQ9NQ60 294 aa13.62□□□□□ -0.23
CHD3-211ENST00000481999 SLC35C2Q9NQQ7 365 aa13.62□□□□□ -0.23
CHD3-211ENST00000481999 PLCXD1Q9NUJ7 323 aa13.62□□□□□ -0.23
CHD3-211ENST00000481999 RLIMQ9NVW2 624 aa13.62□□□□□ -0.23
CHD3-211ENST00000481999 DAPK2Q9UIK4 370 aa13.62□□□□□ -0.23
CHD3-211ENST00000481999 DOLKQ9UPQ8 538 aa13.62□□□□□ -0.23
CHD3-211ENST00000481999 RNF6Q9Y252 685 aa13.62□□□□□ -0.23
CHD3-211ENST00000481999 HMGN4O00479 90 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms