RNA–Protein interactions for RNA: ENST00000480744.2

LIMS3-203, Transcript of LIM zinc finger domain containing 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LIMS3, Length 1,197 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS3-203ENST00000480744 ZNF441Q8N8Z8 693 aa14□□□□□ -0.17
LIMS3-203ENST00000480744 MNS1Q8NEH6 495 aa14□□□□□ -0.17
LIMS3-203ENST00000480744 NEIL3Q8TAT5 605 aa14□□□□□ -0.17
LIMS3-203ENST00000480744 IFT81Q8WYA0 676 aa14□□□□□ -0.17
LIMS3-203ENST00000480744 NTMT1Q9BV86 223 aa14□□□□□ -0.17
LIMS3-203ENST00000480744 OR10A5Q9H207 317 aa14□□□□□ -0.17
LIMS3-203ENST00000480744 ELOVL6Q9H5J4 265 aa14□□□□□ -0.17
LIMS3-203ENST00000480744 ZBTB26Q9HCK0 441 aa14□□□□□ -0.17
LIMS3-203ENST00000480744 QPCTLQ9NXS2 382 aa14□□□□□ -0.17
LIMS3-203ENST00000480744 SLC12A4Q9UP95 1085 aa14□□□□□ -0.17
LIMS3-203ENST00000480744 NPFFR2Q9Y5X5 522 aa14□□□□□ -0.17
LIMS3-203ENST00000480744 FAM47E-STBD1D6RA91 191 aa13.99□□□□□ -0.17
LIMS3-203ENST00000480744 KRT38O76015 456 aa13.99□□□□□ -0.17
LIMS3-203ENST00000480744 ZWINTO95229 277 aa13.99□□□□□ -0.17
LIMS3-203ENST00000480744 CPMP14384 443 aa13.99□□□□□ -0.17
LIMS3-203ENST00000480744 KRT15P19012 456 aa13.99□□□□□ -0.17
LIMS3-203ENST00000480744 TSPAN8P19075 237 aa13.99□□□□□ -0.17
LIMS3-203ENST00000480744 ECHS1P30084 290 aa13.99□□□□□ -0.17
LIMS3-203ENST00000480744 DEKP35659 375 aaKnown RBP13.99□□□□□ -0.17
LIMS3-203ENST00000480744 MAGEA12P43365 314 aa13.99□□□□□ -0.17
LIMS3-203ENST00000480744 MASP1P48740 699 aa13.99□□□□□ -0.17
LIMS3-203ENST00000480744 TMED10P49755 219 aaKnown RBP13.99□□□□□ -0.17
LIMS3-203ENST00000480744 SERPINB9P50453 376 aa13.99□□□□□ -0.17
LIMS3-203ENST00000480744 MAPK12P53778 367 aa13.99□□□□□ -0.17
LIMS3-203ENST00000480744 NRG3P56975 720 aa13.99□□□□□ -0.17
LIMS3-203ENST00000480744 TOMM20Q15388 145 aa13.99□□□□□ -0.17
LIMS3-203ENST00000480744 TBCELQ5QJ74 424 aa13.99□□□□□ -0.17
LIMS3-203ENST00000480744 CES4AQ5XG92 561 aa13.99□□□□□ -0.17
LIMS3-203ENST00000480744 ULK2Q8IYT8 1036 aa13.99□□□□□ -0.17
LIMS3-203ENST00000480744 OR4F6Q8NGB9 312 aa13.99□□□□□ -0.17
LIMS3-203ENST00000480744 TP53INP1Q96A56 240 aa13.99□□□□□ -0.17
LIMS3-203ENST00000480744 RILPQ96NA2 401 aa13.99□□□□□ -0.17
LIMS3-203ENST00000480744 BRINP2Q9C0B6 783 aa13.99□□□□□ -0.17
LIMS3-203ENST00000480744 ACKR4Q9NPB9 350 aa13.99□□□□□ -0.17
LIMS3-203ENST00000480744 FARSBQ9NSD9 589 aaKnown RBP13.99□□□□□ -0.17
LIMS3-203ENST00000480744 KCNN3Q9UGI6 736 aa13.99□□□□□ -0.17
LIMS3-203ENST00000480744 SPG11Q96JI7 2443 aa13.99□□□□□ -0.17
LIMS3-203ENST00000480744 HIVEP1P15822 2718 aa13.99□□□□□ -0.17
LIMS3-203ENST00000480744 TRIM49D1C9J1S8 452 aa13.98□□□□□ -0.17
LIMS3-203ENST00000480744 TRIM3O75382 744 aaPredicted RBP13.98□□□□□ -0.17
LIMS3-203ENST00000480744 ERAL1O75616 437 aaKnown RBP13.98□□□□□ -0.17
LIMS3-203ENST00000480744 PORP16435 677 aaPredicted RBP13.98□□□□□ -0.17
LIMS3-203ENST00000480744 CDH13P55290 713 aa13.98□□□□□ -0.17
LIMS3-203ENST00000480744 RPP38P78345 283 aaKnown RBP13.98□□□□□ -0.17
LIMS3-203ENST00000480744 FUT7Q11130 342 aa13.98□□□□□ -0.17
LIMS3-203ENST00000480744 DUSP8Q13202 625 aa13.98□□□□□ -0.17
LIMS3-203ENST00000480744 SNTB1Q13884 538 aaKnown RBP13.98□□□□□ -0.17
LIMS3-203ENST00000480744 NNATQ16517 81 aa13.98□□□□□ -0.17
LIMS3-203ENST00000480744 SLC25A35Q3KQZ1 300 aa13.98□□□□□ -0.17
LIMS3-203ENST00000480744 TEX35Q5T0J7 233 aa13.98□□□□□ -0.17
LIMS3-203ENST00000480744 RIPPLY2Q5TAB7 128 aa13.98□□□□□ -0.17
LIMS3-203ENST00000480744 FAM219BQ5XKK7 198 aa13.98□□□□□ -0.17
LIMS3-203ENST00000480744 COMMD6Q7Z4G1 85 aa13.98□□□□□ -0.17
LIMS3-203ENST00000480744 PACS2Q86VP3 889 aa13.98□□□□□ -0.17
LIMS3-203ENST00000480744 RELL1Q8IUW5 271 aa13.98□□□□□ -0.17
LIMS3-203ENST00000480744 METTL4Q8N3J2 472 aa13.98□□□□□ -0.17
LIMS3-203ENST00000480744 CEP112Q8N8E3 955 aa13.98□□□□□ -0.17
LIMS3-203ENST00000480744 ZNF615Q8N8J6 731 aa13.98□□□□□ -0.17
LIMS3-203ENST00000480744 MYRIPQ8NFW9 859 aa13.98□□□□□ -0.17
LIMS3-203ENST00000480744 SPPL2AQ8TCT8 520 aa13.98□□□□□ -0.17
LIMS3-203ENST00000480744 SELENOMQ8WWX9 145 aa13.98□□□□□ -0.17
LIMS3-203ENST00000480744 ISL2Q96A47 359 aa13.98□□□□□ -0.17
LIMS3-203ENST00000480744 FMO2Q99518 471 aa13.98□□□□□ -0.17
LIMS3-203ENST00000480744 MRPL57Q9BQC6 102 aaKnown RBP13.98□□□□□ -0.17
LIMS3-203ENST00000480744 FUT8Q9BYC5 575 aa13.98□□□□□ -0.17
LIMS3-203ENST00000480744 TSPYL1Q9H0U9 437 aa13.98□□□□□ -0.17
LIMS3-203ENST00000480744 MRPL46Q9H2W6 279 aaKnown RBP13.98□□□□□ -0.17
LIMS3-203ENST00000480744 L2HGDHQ9H9P8 463 aa13.98□□□□□ -0.17
LIMS3-203ENST00000480744 SLC24A3Q9HC58 644 aa13.98□□□□□ -0.17
LIMS3-203ENST00000480744 RYDENQ9NUL5 291 aaKnown RBP13.98□□□□□ -0.17
LIMS3-203ENST00000480744 BCAP29Q9UHQ4 241 aa13.98□□□□□ -0.17
LIMS3-203ENST00000480744 ADAM29Q9UKF5 820 aa13.98□□□□□ -0.17
LIMS3-203ENST00000480744 KIAA1549Q9HCM3 1950 aa13.98□□□□□ -0.17
LIMS3-203ENST00000480744 A0A1B0GTL3 188 aa13.97□□□□□ -0.17
LIMS3-203ENST00000480744 ANKRD33BA6NCL7 494 aa13.97□□□□□ -0.17
LIMS3-203ENST00000480744 GOLGA6L10A6NI86 522 aa13.97□□□□□ -0.17
LIMS3-203ENST00000480744 ZNF500O60304 480 aaPredicted RBP13.97□□□□□ -0.17
LIMS3-203ENST00000480744 GUCY1B2O75343 617 aa13.97□□□□□ -0.17
LIMS3-203ENST00000480744 OTCP00480 354 aa13.97□□□□□ -0.17
LIMS3-203ENST00000480744 PDYNP01213 254 aa13.97□□□□□ -0.17
LIMS3-203ENST00000480744 RPS17P08708 135 aaKnown RBP13.97□□□□□ -0.17
LIMS3-203ENST00000480744 COL6A2P12110 1019 aa13.97□□□□□ -0.17
LIMS3-203ENST00000480744 GPX3P22352 226 aa13.97□□□□□ -0.17
LIMS3-203ENST00000480744 FEN1P39748 380 aaKnown RBP13.97□□□□□ -0.17
LIMS3-203ENST00000480744 ALDH9A1P49189 494 aa13.97□□□□□ -0.17
LIMS3-203ENST00000480744 DLX5P56178 289 aa13.97□□□□□ -0.17
LIMS3-203ENST00000480744 WNT3P56703 355 aa13.97□□□□□ -0.17
LIMS3-203ENST00000480744 GGTA1PQ4G0N0 100 aa13.97□□□□□ -0.17
LIMS3-203ENST00000480744 C10orf62Q5T681 223 aaPredicted RBP13.97□□□□□ -0.17
LIMS3-203ENST00000480744 LETMD1Q6P1Q0 360 aa13.97□□□□□ -0.17
LIMS3-203ENST00000480744 FAM111BQ6SJ93 734 aa13.97□□□□□ -0.17
LIMS3-203ENST00000480744 MMP21Q8N119 569 aa13.97□□□□□ -0.17
LIMS3-203ENST00000480744 VWA5B2Q8N398 1253 aa13.97□□□□□ -0.17
LIMS3-203ENST00000480744 OR7G1Q8NGA0 311 aa13.97□□□□□ -0.17
LIMS3-203ENST00000480744 ZNF483Q8TF39 744 aaPredicted RBP13.97□□□□□ -0.17
LIMS3-203ENST00000480744 DCAKDQ8WVC6 231 aa13.97□□□□□ -0.17
LIMS3-203ENST00000480744 ADIPOR1Q96A54 375 aa13.97□□□□□ -0.17
LIMS3-203ENST00000480744 HBEGFQ99075 208 aa13.97□□□□□ -0.17
LIMS3-203ENST00000480744 SNX6Q9UNH7 406 aa13.97□□□□□ -0.17
LIMS3-203ENST00000480744 DTX4Q9Y2E6 619 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms