RNA–Protein interactions for RNA: ENST00000480139.5

LIME1-205, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene LIME1, Length 819 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-205ENST00000480139 ATRXP46100 2492 aa18.33■□□□□ 0.53
LIME1-205ENST00000480139 PLOD3O60568 738 aa18.33■□□□□ 0.52
LIME1-205ENST00000480139 DPM1O60762 260 aa18.33■□□□□ 0.52
LIME1-205ENST00000480139 BCAS2O75934 225 aaPredicted RBP18.33■□□□□ 0.52
LIME1-205ENST00000480139 CLNS1AP54105 237 aaKnown RBP18.33■□□□□ 0.52
LIME1-205ENST00000480139 DPY19L1Q2PZI1 675 aa18.33■□□□□ 0.52
LIME1-205ENST00000480139 CPTPQ5TA50 214 aa18.33■□□□□ 0.52
LIME1-205ENST00000480139 LINC00696Q6ZRV3 163 aa18.33■□□□□ 0.52
LIME1-205ENST00000480139 C9orf40Q8IXQ3 194 aa18.33■□□□□ 0.52
LIME1-205ENST00000480139 ADCY4Q8NFM4 1077 aa18.33■□□□□ 0.52
LIME1-205ENST00000480139 OR7A2PQ8NGA2 310 aa18.33■□□□□ 0.52
LIME1-205ENST00000480139 SLC39A7Q92504 469 aa18.33■□□□□ 0.52
LIME1-205ENST00000480139 HAS2Q92819 552 aa18.33■□□□□ 0.52
LIME1-205ENST00000480139 BBC3Q96PG8 261 aaPredicted RBP18.33■□□□□ 0.52
LIME1-205ENST00000480139 BHLHE41Q9C0J9 482 aaPredicted RBP18.33■□□□□ 0.52
LIME1-205ENST00000480139 ZBTB20Q9HC78 741 aaPredicted RBP18.33■□□□□ 0.52
LIME1-205ENST00000480139 ZNF71Q9NQZ8 489 aaPredicted RBP18.33■□□□□ 0.52
LIME1-205ENST00000480139 STMN3Q9NZ72 180 aa18.33■□□□□ 0.52
LIME1-205ENST00000480139 ABI3Q9P2A4 366 aa18.33■□□□□ 0.52
LIME1-205ENST00000480139 CFL2Q9Y281 166 aa18.33■□□□□ 0.52
LIME1-205ENST00000480139 A0A087WV62 115 aa18.32■□□□□ 0.52
LIME1-205ENST00000480139 TMEM200CA6NKL6 621 aa18.32■□□□□ 0.52
LIME1-205ENST00000480139 PLOD2O00469 737 aa18.32■□□□□ 0.52
LIME1-205ENST00000480139 UBDO15205 165 aa18.32■□□□□ 0.52
LIME1-205ENST00000480139 PRKNO60260 465 aaPredicted RBP18.32■□□□□ 0.52
LIME1-205ENST00000480139 CBX7O95931 251 aa18.32■□□□□ 0.52
LIME1-205ENST00000480139 LAMP1P11279 417 aa18.32■□□□□ 0.52
LIME1-205ENST00000480139 SSTR4P31391 388 aa18.32■□□□□ 0.52
LIME1-205ENST00000480139 MRPL19P49406 292 aaKnown RBP18.32■□□□□ 0.52
LIME1-205ENST00000480139 IRX1P78414 480 aaPredicted RBP18.32■□□□□ 0.52
LIME1-205ENST00000480139 EBPQ15125 230 aaKnown RBP18.32■□□□□ 0.52
LIME1-205ENST00000480139 PDCD4Q53EL6 469 aaKnown RBP18.32■□□□□ 0.52
LIME1-205ENST00000480139 FAM111BQ6SJ93 734 aa18.32■□□□□ 0.52
LIME1-205ENST00000480139 SLC29A4Q7RTT9 530 aa18.32■□□□□ 0.52
LIME1-205ENST00000480139 ZADH2Q8N4Q0 377 aa18.32■□□□□ 0.52
LIME1-205ENST00000480139 OR8J2Q8NGG1 315 aa18.32■□□□□ 0.52
LIME1-205ENST00000480139 CIDECQ96AQ7 238 aaPredicted RBP18.32■□□□□ 0.52
LIME1-205ENST00000480139 EBF4Q9BQW3 602 aa18.32■□□□□ 0.52
LIME1-205ENST00000480139 OR10A5Q9H207 317 aa18.32■□□□□ 0.52
LIME1-205ENST00000480139 CDCP1Q9H5V8 836 aa18.32■□□□□ 0.52
LIME1-205ENST00000480139 NPHS2Q9NP85 383 aa18.32■□□□□ 0.52
LIME1-205ENST00000480139 MYOTQ9UBF9 498 aa18.32■□□□□ 0.52
LIME1-205ENST00000480139 FCHO1O14526 889 aa18.31■□□□□ 0.52
LIME1-205ENST00000480139 PRAMEF2O60811 474 aa18.31■□□□□ 0.52
LIME1-205ENST00000480139 VIMP08670 466 aaKnown RBP18.31■□□□□ 0.52
LIME1-205ENST00000480139 TROVE2P10155 538 aaKnown RBP eCLIP18.31■□□□□ 0.52
LIME1-205ENST00000480139 TRHRP34981 398 aaPredicted RBP18.31■□□□□ 0.52
LIME1-205ENST00000480139 MRPS35P82673 323 aaKnown RBP18.31■□□□□ 0.52
LIME1-205ENST00000480139 SRSF11Q05519 484 aaKnown RBP18.31■□□□□ 0.52
LIME1-205ENST00000480139 TRMT12Q53H54 448 aaKnown RBP18.31■□□□□ 0.52
LIME1-205ENST00000480139 FHL5Q5TD97 284 aa18.31■□□□□ 0.52
LIME1-205ENST00000480139 FCRLBQ6BAA4 426 aa18.31■□□□□ 0.52
LIME1-205ENST00000480139 BEST3Q8N1M1 668 aa18.31■□□□□ 0.52
LIME1-205ENST00000480139 GLB1L3Q8NCI6 653 aaPredicted RBP18.31■□□□□ 0.52
LIME1-205ENST00000480139 C17orf47Q8NEP4 570 aa18.31■□□□□ 0.52
LIME1-205ENST00000480139 DOK4Q8TEW6 326 aa18.31■□□□□ 0.52
LIME1-205ENST00000480139 ZNF317Q96PQ6 595 aaPredicted RBP18.31■□□□□ 0.52
LIME1-205ENST00000480139 DUSP26Q9BV47 211 aa18.31■□□□□ 0.52
LIME1-205ENST00000480139 WWTR1Q9GZV5 400 aa18.31■□□□□ 0.52
LIME1-205ENST00000480139 CLMPQ9H6B4 373 aa18.31■□□□□ 0.52
LIME1-205ENST00000480139 SDR39U1Q9NRG7 319 aaPredicted RBP18.31■□□□□ 0.52
LIME1-205ENST00000480139 FGFR1OP2Q9NVK5 253 aa18.31■□□□□ 0.52
LIME1-205ENST00000480139 YARS2Q9Y2Z4 477 aaKnown RBP18.31■□□□□ 0.52
LIME1-205ENST00000480139 DYTNA2CJ06 578 aa18.3■□□□□ 0.52
LIME1-205ENST00000480139 E9PBE3 544 aa18.3■□□□□ 0.52
LIME1-205ENST00000480139 MAN1A2O60476 641 aa18.3■□□□□ 0.52
LIME1-205ENST00000480139 WDPCPO95876 746 aa18.3■□□□□ 0.52
LIME1-205ENST00000480139 PTGER1P34995 402 aa18.3■□□□□ 0.52
LIME1-205ENST00000480139 MANFP55145 182 aaKnown RBP18.3■□□□□ 0.52
LIME1-205ENST00000480139 DUSP8Q13202 625 aa18.3■□□□□ 0.52
LIME1-205ENST00000480139 RPS6KA2Q15349 733 aa18.3■□□□□ 0.52
LIME1-205ENST00000480139 SOWAHCQ53LP3 525 aaPredicted RBP18.3■□□□□ 0.52
LIME1-205ENST00000480139 TMEM198Q66K66 360 aa18.3■□□□□ 0.52
LIME1-205ENST00000480139 OR2L13Q8N349 312 aa18.3■□□□□ 0.52
LIME1-205ENST00000480139 ZNF441Q8N8Z8 693 aa18.3■□□□□ 0.52
LIME1-205ENST00000480139 OR7G2Q8NG99 324 aa18.3■□□□□ 0.52
LIME1-205ENST00000480139 C16orf52Q8NHV5 167 aa18.3■□□□□ 0.52
LIME1-205ENST00000480139 PSMA8Q8TAA3 256 aa18.3■□□□□ 0.52
LIME1-205ENST00000480139 KAT2AQ92830 837 aa18.3■□□□□ 0.52
LIME1-205ENST00000480139 TP53INP1Q96A56 240 aa18.3■□□□□ 0.52
LIME1-205ENST00000480139 ELP4Q96EB1 424 aa18.3■□□□□ 0.52
LIME1-205ENST00000480139 TRIM45Q9H8W5 580 aaPredicted RBP18.3■□□□□ 0.52
LIME1-205ENST00000480139 ZIM2Q9NZV7 527 aa18.3■□□□□ 0.52
LIME1-205ENST00000480139 PRODH2Q9UF12 536 aa18.3■□□□□ 0.52
LIME1-205ENST00000480139 A0A1W2PRB8 838 aa18.29■□□□□ 0.52
LIME1-205ENST00000480139 OR5H15A6NDH6 313 aa18.29■□□□□ 0.52
LIME1-205ENST00000480139 COQ9O75208 318 aa18.29■□□□□ 0.52
LIME1-205ENST00000480139 ITGA10O75578 1167 aa18.29■□□□□ 0.52
LIME1-205ENST00000480139 KIR3DL1P43629 444 aa18.29■□□□□ 0.52
LIME1-205ENST00000480139 CD97P48960 835 aa18.29■□□□□ 0.52
LIME1-205ENST00000480139 EMDP50402 254 aa18.29■□□□□ 0.52
LIME1-205ENST00000480139 UFM1P61960 85 aa18.29■□□□□ 0.52
LIME1-205ENST00000480139 ARG2P78540 354 aa18.29■□□□□ 0.52
LIME1-205ENST00000480139 KLRB1Q12918 225 aa18.29■□□□□ 0.52
LIME1-205ENST00000480139 HSPB3Q12988 150 aa18.29■□□□□ 0.52
LIME1-205ENST00000480139 EXOSC7Q15024 291 aaKnown RBP18.29■□□□□ 0.52
LIME1-205ENST00000480139 TMEM107Q6UX40 140 aa18.29■□□□□ 0.52
LIME1-205ENST00000480139 Q6ZS92 163 aa18.29■□□□□ 0.52
LIME1-205ENST00000480139 ZNF551Q7Z340 670 aaPredicted RBP18.29■□□□□ 0.52
LIME1-205ENST00000480139 SLC15A4Q8N697 577 aa18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms