RNA–Protein interactions for RNA: ENST00000479897.5

TRAPPC12-218, Transcript of trafficking protein particle complex 12, humanhuman

TSL 3

Gene TRAPPC12, Length 454 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-218ENST00000479897 SLC2A12Q8TD20 617 aa11.7□□□□□ -0.54
TRAPPC12-218ENST00000479897 PPWD1Q96BP3 646 aaKnown RBP11.7□□□□□ -0.54
TRAPPC12-218ENST00000479897 RCN3Q96D15 328 aa11.7□□□□□ -0.54
TRAPPC12-218ENST00000479897 ELP4Q96EB1 424 aa11.7□□□□□ -0.54
TRAPPC12-218ENST00000479897 FAM120BQ96EK7 910 aaKnown RBP11.7□□□□□ -0.54
TRAPPC12-218ENST00000479897 INPP5KQ9BT40 448 aa11.7□□□□□ -0.54
TRAPPC12-218ENST00000479897 SEMA4CQ9C0C4 833 aa11.7□□□□□ -0.54
TRAPPC12-218ENST00000479897 PNO1Q9NRX1 252 aaKnown RBP11.7□□□□□ -0.54
TRAPPC12-218ENST00000479897 MAP10Q9P2G4 905 aa11.7□□□□□ -0.54
TRAPPC12-218ENST00000479897 VPS4AQ9UN37 437 aa11.7□□□□□ -0.54
TRAPPC12-218ENST00000479897 C19orf53Q9UNZ5 99 aaPredicted RBP11.7□□□□□ -0.54
TRAPPC12-218ENST00000479897 CLCA3PQ9Y6N3 262 aa11.7□□□□□ -0.54
TRAPPC12-218ENST00000479897 FREM2Q5SZK8 3169 aa11.69□□□□□ -0.54
TRAPPC12-218ENST00000479897 MYOCOSA0A1B0GUC4 107 aa11.69□□□□□ -0.54
TRAPPC12-218ENST00000479897 EMC8O43402 210 aa11.69□□□□□ -0.54
TRAPPC12-218ENST00000479897 COQ9O75208 318 aa11.69□□□□□ -0.54
TRAPPC12-218ENST00000479897 CBX6O95503 412 aa11.69□□□□□ -0.54
TRAPPC12-218ENST00000479897 CBX7O95931 251 aa11.69□□□□□ -0.54
TRAPPC12-218ENST00000479897 HPP00738 406 aa11.69□□□□□ -0.54
TRAPPC12-218ENST00000479897 CLPSP04118 112 aa11.69□□□□□ -0.54
TRAPPC12-218ENST00000479897 T-ENOLP0DO92 83 aa11.69□□□□□ -0.54
TRAPPC12-218ENST00000479897 UQCRC2P22695 453 aa11.69□□□□□ -0.54
TRAPPC12-218ENST00000479897 OTX2P32243 289 aa11.69□□□□□ -0.54
TRAPPC12-218ENST00000479897 EIF2S3P41091 472 aaKnown RBP11.69□□□□□ -0.54
TRAPPC12-218ENST00000479897 MAGEA8P43361 318 aa11.69□□□□□ -0.54
TRAPPC12-218ENST00000479897 SLC26A5P58743 744 aa11.69□□□□□ -0.54
TRAPPC12-218ENST00000479897 MRPS35P82673 323 aaKnown RBP11.69□□□□□ -0.54
TRAPPC12-218ENST00000479897 TXNL4AP83876 142 aaKnown RBP11.69□□□□□ -0.54
TRAPPC12-218ENST00000479897 PRR5P85299 388 aa11.69□□□□□ -0.54
TRAPPC12-218ENST00000479897 EEF1A2Q05639 463 aaKnown RBP11.69□□□□□ -0.54
TRAPPC12-218ENST00000479897 NFYCQ13952 458 aa11.69□□□□□ -0.54
TRAPPC12-218ENST00000479897 EXT1Q16394 746 aa11.69□□□□□ -0.54
TRAPPC12-218ENST00000479897 C8orf82Q6P1X6 216 aaPredicted RBP11.69□□□□□ -0.54
TRAPPC12-218ENST00000479897 BHLHB9Q6PI77 547 aa11.69□□□□□ -0.54
TRAPPC12-218ENST00000479897 FAM111BQ6SJ93 734 aa11.69□□□□□ -0.54
TRAPPC12-218ENST00000479897 TMEM107Q6UX40 140 aa11.69□□□□□ -0.54
TRAPPC12-218ENST00000479897 NDUFAF7Q7L592 441 aa11.69□□□□□ -0.54
TRAPPC12-218ENST00000479897 GPR155Q7Z3F1 870 aa11.69□□□□□ -0.54
TRAPPC12-218ENST00000479897 MSRB3Q8IXL7 192 aa11.69□□□□□ -0.54
TRAPPC12-218ENST00000479897 APCDD1LQ8NCL9 501 aa11.69□□□□□ -0.54
TRAPPC12-218ENST00000479897 ADCY4Q8NFM4 1077 aa11.69□□□□□ -0.54
TRAPPC12-218ENST00000479897 OR1N1Q8NGS0 311 aa11.69□□□□□ -0.54
TRAPPC12-218ENST00000479897 ZNF721Q8TF20 911 aa11.69□□□□□ -0.54
TRAPPC12-218ENST00000479897 C8orf44Q96CB5 159 aa11.69□□□□□ -0.54
TRAPPC12-218ENST00000479897 NEURL3Q96EH8 262 aa11.69□□□□□ -0.54
TRAPPC12-218ENST00000479897 NSL1Q96IY1 281 aa11.69□□□□□ -0.54
TRAPPC12-218ENST00000479897 IMMP1LQ96LU5 166 aa11.69□□□□□ -0.54
TRAPPC12-218ENST00000479897 MS4A4EQ96PG1 132 aa11.69□□□□□ -0.54
TRAPPC12-218ENST00000479897 MESP1Q9BRJ9 268 aa11.69□□□□□ -0.54
TRAPPC12-218ENST00000479897 EPS8L2Q9H6S3 715 aa11.69□□□□□ -0.54
TRAPPC12-218ENST00000479897 EFCAB1Q9HAE3 211 aa11.69□□□□□ -0.54
TRAPPC12-218ENST00000479897 C3orf14Q9HBI5 128 aa11.69□□□□□ -0.54
TRAPPC12-218ENST00000479897 SLC6A13Q9NSD5 602 aa11.69□□□□□ -0.54
TRAPPC12-218ENST00000479897 DDX18Q9NVP1 670 aaKnown RBP11.69□□□□□ -0.54
TRAPPC12-218ENST00000479897 SDAD1Q9NVU7 687 aaKnown RBP eCLIP11.69□□□□□ -0.54
TRAPPC12-218ENST00000479897 SLC25A37Q9NYZ2 338 aa11.69□□□□□ -0.54
TRAPPC12-218ENST00000479897 PCDHB14Q9Y5E9 798 aa11.69□□□□□ -0.54
TRAPPC12-218ENST00000479897 ASPMQ8IZT6 3477 aa11.69□□□□□ -0.54
TRAPPC12-218ENST00000479897 IGF2RP11717 2491 aa11.68□□□□□ -0.54
TRAPPC12-218ENST00000479897 GIMAP1-GIMAP5A0A087WTJ2 511 aa11.68□□□□□ -0.54
TRAPPC12-218ENST00000479897 C15orf38-AP3S2A0A0A6YYH1 394 aa11.68□□□□□ -0.54
TRAPPC12-218ENST00000479897 RNF103-CHMP3A0A140T963 221 aa11.68□□□□□ -0.54
TRAPPC12-218ENST00000479897 TMEM8BA6NDV4 472 aa11.68□□□□□ -0.54
TRAPPC12-218ENST00000479897 OR6C76A6NM76 312 aa11.68□□□□□ -0.54
TRAPPC12-218ENST00000479897 ZNF891A8MT65 544 aaPredicted RBP11.68□□□□□ -0.54
TRAPPC12-218ENST00000479897 UPK1AO00322 258 aa11.68□□□□□ -0.54
TRAPPC12-218ENST00000479897 EBAG9O00559 213 aa11.68□□□□□ -0.54
TRAPPC12-218ENST00000479897 PRAMEF2O60811 474 aa11.68□□□□□ -0.54
TRAPPC12-218ENST00000479897 HNRNPCL1O60812 293 aaKnown RBP11.68□□□□□ -0.54
TRAPPC12-218ENST00000479897 CPSF4O95639 269 aaKnown RBP11.68□□□□□ -0.54
TRAPPC12-218ENST00000479897 ABCB1P08183 1280 aaPredicted RBP11.68□□□□□ -0.54
TRAPPC12-218ENST00000479897 ESRRAP11474 423 aaPredicted RBP11.68□□□□□ -0.54
TRAPPC12-218ENST00000479897 TNNI3P19429 210 aa11.68□□□□□ -0.54
TRAPPC12-218ENST00000479897 PPIBP23284 216 aaKnown RBP11.68□□□□□ -0.54
TRAPPC12-218ENST00000479897 PTGER1P34995 402 aa11.68□□□□□ -0.54
TRAPPC12-218ENST00000479897 SOAT1P35610 550 aa11.68□□□□□ -0.54
TRAPPC12-218ENST00000479897 CCT3P49368 545 aaKnown RBP11.68□□□□□ -0.54
TRAPPC12-218ENST00000479897 SLC37A1P57057 533 aa11.68□□□□□ -0.54
TRAPPC12-218ENST00000479897 VAC14Q08AM6 782 aa11.68□□□□□ -0.54
TRAPPC12-218ENST00000479897 BNIP1Q12981 228 aa11.68□□□□□ -0.54
TRAPPC12-218ENST00000479897 DUSP8Q13202 625 aa11.68□□□□□ -0.54
TRAPPC12-218ENST00000479897 TRMT12Q53H54 448 aaKnown RBP11.68□□□□□ -0.54
TRAPPC12-218ENST00000479897 EXOSC6Q5RKV6 272 aaKnown RBP11.68□□□□□ -0.54
TRAPPC12-218ENST00000479897 SAXO2Q658L1 398 aa11.68□□□□□ -0.54
TRAPPC12-218ENST00000479897 PLAG1Q6DJT9 500 aa11.68□□□□□ -0.54
TRAPPC12-218ENST00000479897 UNQ6494/PRO21346Q6UXR6 183 aa11.68□□□□□ -0.54
TRAPPC12-218ENST00000479897 DNAJC14Q6Y2X3 702 aaPredicted RBP11.68□□□□□ -0.54
TRAPPC12-218ENST00000479897 ARPINQ7Z6K5 226 aa11.68□□□□□ -0.54
TRAPPC12-218ENST00000479897 ZNF615Q8N8J6 731 aa11.68□□□□□ -0.54
TRAPPC12-218ENST00000479897 OR8K3Q8NH51 312 aa11.68□□□□□ -0.54
TRAPPC12-218ENST00000479897 MIPOL1Q8TD10 442 aa11.68□□□□□ -0.54
TRAPPC12-218ENST00000479897 ZFP90Q8TF47 636 aa11.68□□□□□ -0.54
TRAPPC12-218ENST00000479897 THAP4Q8WY91 577 aa11.68□□□□□ -0.54
TRAPPC12-218ENST00000479897 HOXB13Q92826 284 aaPredicted RBP11.68□□□□□ -0.54
TRAPPC12-218ENST00000479897 KAT2AQ92830 837 aa11.68□□□□□ -0.54
TRAPPC12-218ENST00000479897 GIMAP5Q96F15 307 aa11.68□□□□□ -0.54
TRAPPC12-218ENST00000479897 VMP1Q96GC9 406 aa11.68□□□□□ -0.54
TRAPPC12-218ENST00000479897 SENP5Q96HI0 755 aaPredicted RBP11.68□□□□□ -0.54
TRAPPC12-218ENST00000479897 CCNL2Q96S94 520 aaPredicted RBP11.68□□□□□ -0.54
TRAPPC12-218ENST00000479897 CGREF1Q99674 301 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms