RNA–Protein interactions for RNA: ENST00000479554.5

ATG4B-218, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 4

Gene ATG4B, Length 556 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-218ENST00000479554 TBL3Q12788 808 aaKnown RBP13.22□□□□□ -0.29
ATG4B-218ENST00000479554 IFT88Q13099 833 aa13.22□□□□□ -0.29
ATG4B-218ENST00000479554 TRAF3Q13114 568 aa13.22□□□□□ -0.29
ATG4B-218ENST00000479554 EBPQ15125 230 aaKnown RBP13.22□□□□□ -0.29
ATG4B-218ENST00000479554 EMC4Q5J8M3 183 aa13.22□□□□□ -0.29
ATG4B-218ENST00000479554 C10orf62Q5T681 223 aaPredicted RBP13.22□□□□□ -0.29
ATG4B-218ENST00000479554 SLC22A10Q63ZE4 541 aa13.22□□□□□ -0.29
ATG4B-218ENST00000479554 FRG2Q64ET8 278 aa13.22□□□□□ -0.29
ATG4B-218ENST00000479554 DND1Q8IYX4 353 aaKnown RBP13.22□□□□□ -0.29
ATG4B-218ENST00000479554 RPRMLQ8N4K4 120 aa13.22□□□□□ -0.29
ATG4B-218ENST00000479554 FAM13CQ8NE31 585 aa13.22□□□□□ -0.29
ATG4B-218ENST00000479554 OR5M3Q8NGP4 307 aa13.22□□□□□ -0.29
ATG4B-218ENST00000479554 TCP10LQ8TDR4 215 aa13.22□□□□□ -0.29
ATG4B-218ENST00000479554 RND1Q92730 232 aa13.22□□□□□ -0.29
ATG4B-218ENST00000479554 LURAP1Q96LR2 239 aa13.22□□□□□ -0.29
ATG4B-218ENST00000479554 MAGEB18Q96M61 343 aa13.22□□□□□ -0.29
ATG4B-218ENST00000479554 NSUN5Q96P11 429 aaKnown RBP13.22□□□□□ -0.29
ATG4B-218ENST00000479554 FRG2BQ96QU4 278 aa13.22□□□□□ -0.29
ATG4B-218ENST00000479554 NTMT1Q9BV86 223 aa13.22□□□□□ -0.29
ATG4B-218ENST00000479554 WWTR1Q9GZV5 400 aa13.22□□□□□ -0.29
ATG4B-218ENST00000479554 MRPL46Q9H2W6 279 aaKnown RBP13.22□□□□□ -0.29
ATG4B-218ENST00000479554 PNPLA3Q9NST1 481 aa13.22□□□□□ -0.29
ATG4B-218ENST00000479554 RYDENQ9NUL5 291 aaKnown RBP13.22□□□□□ -0.29
ATG4B-218ENST00000479554 SEC23IPQ9Y6Y8 1000 aaKnown RBP13.22□□□□□ -0.29
ATG4B-218ENST00000479554 ATP6AP2A0A1C7CYW4 349 aa13.21□□□□□ -0.29
ATG4B-218ENST00000479554 FIGNL2A6NMB9 653 aa13.21□□□□□ -0.29
ATG4B-218ENST00000479554 FAM90A27PA6NNH2 459 aa13.21□□□□□ -0.29
ATG4B-218ENST00000479554 WASHC1A8K0Z3 465 aa13.21□□□□□ -0.29
ATG4B-218ENST00000479554 ATP6AP2O75787 350 aa13.21□□□□□ -0.29
ATG4B-218ENST00000479554 FBXO45P0C2W1 286 aa13.21□□□□□ -0.29
ATG4B-218ENST00000479554 SLC35E2P0CK97 266 aa13.21□□□□□ -0.29
ATG4B-218ENST00000479554 ELAVL4P26378 380 aaKnown RBP13.21□□□□□ -0.29
ATG4B-218ENST00000479554 PIK3R1P27986 724 aa13.21□□□□□ -0.29
ATG4B-218ENST00000479554 GALNSP34059 522 aa13.21□□□□□ -0.29
ATG4B-218ENST00000479554 CCT5P48643 541 aa13.21□□□□□ -0.29
ATG4B-218ENST00000479554 KCNJ2P63252 427 aa13.21□□□□□ -0.29
ATG4B-218ENST00000479554 HYAL4Q2M3T9 481 aa13.21□□□□□ -0.29
ATG4B-218ENST00000479554 PRAMEF20Q5VT98 475 aa13.21□□□□□ -0.29
ATG4B-218ENST00000479554 LYPD8Q6UX82 237 aa13.21□□□□□ -0.29
ATG4B-218ENST00000479554 MEX3BQ6ZN04 569 aaKnown RBP13.21□□□□□ -0.29
ATG4B-218ENST00000479554 TRILQ7L0X0 811 aa13.21□□□□□ -0.29
ATG4B-218ENST00000479554 PAGE2Q7Z2X7 111 aa13.21□□□□□ -0.29
ATG4B-218ENST00000479554 GALNT12Q8IXK2 581 aa13.21□□□□□ -0.29
ATG4B-218ENST00000479554 ZNF295-AS1Q8N0V1 137 aa13.21□□□□□ -0.29
ATG4B-218ENST00000479554 FBXW8Q8N3Y1 598 aa13.21□□□□□ -0.29
ATG4B-218ENST00000479554 OR5M9Q8NGP3 310 aa13.21□□□□□ -0.29
ATG4B-218ENST00000479554 PAQR8Q8TEZ7 354 aa13.21□□□□□ -0.29
ATG4B-218ENST00000479554 CHMP6Q96FZ7 201 aa13.21□□□□□ -0.29
ATG4B-218ENST00000479554 PAIP2Q9BPZ3 127 aaKnown RBP13.21□□□□□ -0.29
ATG4B-218ENST00000479554 SPOCK3Q9BQ16 436 aa13.21□□□□□ -0.29
ATG4B-218ENST00000479554 ELOVL6Q9H5J4 265 aa13.21□□□□□ -0.29
ATG4B-218ENST00000479554 LDAHQ9H6V9 325 aa13.21□□□□□ -0.29
ATG4B-218ENST00000479554 ZBTB26Q9HCK0 441 aa13.21□□□□□ -0.29
ATG4B-218ENST00000479554 SH2D2AQ9NP31 389 aa13.21□□□□□ -0.29
ATG4B-218ENST00000479554 SEMA4BQ9NPR2 832 aaPredicted RBP13.21□□□□□ -0.29
ATG4B-218ENST00000479554 TEX10Q9NXF1 929 aaPredicted RBP13.21□□□□□ -0.29
ATG4B-218ENST00000479554 AHSPQ9NZD4 102 aa13.21□□□□□ -0.29
ATG4B-218ENST00000479554 BOKQ9UMX3 212 aaPredicted RBP13.21□□□□□ -0.29
ATG4B-218ENST00000479554 RNF6Q9Y252 685 aa13.21□□□□□ -0.29
ATG4B-218ENST00000479554 PKDREJQ9NTG1 2253 aa13.21□□□□□ -0.29
ATG4B-218ENST00000479554 A0A1B0GVC2 190 aa13.2□□□□□ -0.3
ATG4B-218ENST00000479554 AQP7O14520 342 aa13.2□□□□□ -0.3
ATG4B-218ENST00000479554 PGRMC2O15173 223 aa13.2□□□□□ -0.3
ATG4B-218ENST00000479554 SUSD5O60279 629 aa13.2□□□□□ -0.3
ATG4B-218ENST00000479554 FAM107AO95990 144 aa13.2□□□□□ -0.3
ATG4B-218ENST00000479554 CLPSP04118 112 aa13.2□□□□□ -0.3
ATG4B-218ENST00000479554 KLK1P06870 262 aa13.2□□□□□ -0.3
ATG4B-218ENST00000479554 RPS17P08708 135 aaKnown RBP13.2□□□□□ -0.3
ATG4B-218ENST00000479554 CELA3AP09093 270 aa13.2□□□□□ -0.3
ATG4B-218ENST00000479554 SERPINB3P29508 390 aa13.2□□□□□ -0.3
ATG4B-218ENST00000479554 CRHR1P34998 444 aa13.2□□□□□ -0.3
ATG4B-218ENST00000479554 MAN2A2P49641 1150 aa13.2□□□□□ -0.3
ATG4B-218ENST00000479554 SEC24CP53992 1094 aa13.2□□□□□ -0.3
ATG4B-218ENST00000479554 NUP107P57740 925 aa13.2□□□□□ -0.3
ATG4B-218ENST00000479554 PMPCAQ10713 525 aa13.2□□□□□ -0.3
ATG4B-218ENST00000479554 SLC10A1Q14973 349 aa13.2□□□□□ -0.3
ATG4B-218ENST00000479554 GGTA1PQ4G0N0 100 aa13.2□□□□□ -0.3
ATG4B-218ENST00000479554 GXYLT1Q4G148 440 aa13.2□□□□□ -0.3
ATG4B-218ENST00000479554 C6orf163Q5TEZ5 329 aa13.2□□□□□ -0.3
ATG4B-218ENST00000479554 ZNF585AQ6P3V2 769 aa13.2□□□□□ -0.3
ATG4B-218ENST00000479554 ACAD11Q709F0 780 aa13.2□□□□□ -0.3
ATG4B-218ENST00000479554 ZNF771Q7L3S4 317 aaPredicted RBP13.2□□□□□ -0.3
ATG4B-218ENST00000479554 MILR1Q7Z6M3 343 aa13.2□□□□□ -0.3
ATG4B-218ENST00000479554 TAGAPQ8N103 731 aa13.2□□□□□ -0.3
ATG4B-218ENST00000479554 OR4F6Q8NGB9 312 aa13.2□□□□□ -0.3
ATG4B-218ENST00000479554 OR10G3Q8NGC4 313 aa13.2□□□□□ -0.3
ATG4B-218ENST00000479554 BCAS4Q8TDM0 211 aa13.2□□□□□ -0.3
ATG4B-218ENST00000479554 CHTF18Q8WVB6 975 aa13.2□□□□□ -0.3
ATG4B-218ENST00000479554 UCN3Q969E3 161 aa13.2□□□□□ -0.3
ATG4B-218ENST00000479554 SARAFQ96BY9 339 aa13.2□□□□□ -0.3
ATG4B-218ENST00000479554 ZNF317Q96PQ6 595 aaPredicted RBP13.2□□□□□ -0.3
ATG4B-218ENST00000479554 CCT8L2Q96SF2 557 aa13.2□□□□□ -0.3
ATG4B-218ENST00000479554 MRPL57Q9BQC6 102 aaKnown RBP13.2□□□□□ -0.3
ATG4B-218ENST00000479554 MRPL1Q9BYD6 325 aaKnown RBP13.2□□□□□ -0.3
ATG4B-218ENST00000479554 ENKD1Q9H0I2 346 aa13.2□□□□□ -0.3
ATG4B-218ENST00000479554 EXO5Q9H790 373 aa13.2□□□□□ -0.3
ATG4B-218ENST00000479554 ZNF703Q9H7S9 590 aaPredicted RBP13.2□□□□□ -0.3
ATG4B-218ENST00000479554 CXorf21Q9HAI6 301 aa13.2□□□□□ -0.3
ATG4B-218ENST00000479554 CNIH4Q9P003 139 aa13.2□□□□□ -0.3
ATG4B-218ENST00000479554 ADAM29Q9UKF5 820 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms