RNA–Protein interactions for RNA: ENST00000479532.1

SF3B1-209, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 587 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-209ENST00000479532 CCNJQ5T5M9 372 aa5.84□□□□□ -1.47
SF3B1-209ENST00000479532 FRG2Q64ET8 278 aa5.84□□□□□ -1.47
SF3B1-209ENST00000479532 RHBDD2Q6NTF9 364 aa5.84□□□□□ -1.47
SF3B1-209ENST00000479532 PWWP2BQ6NUJ5 590 aa5.84□□□□□ -1.47
SF3B1-209ENST00000479532 SLC2A7Q6PXP3 512 aa5.84□□□□□ -1.47
SF3B1-209ENST00000479532 LINC00299Q6ZSB3 139 aa5.84□□□□□ -1.47
SF3B1-209ENST00000479532 CUZD1Q86UP6 607 aa5.84□□□□□ -1.47
SF3B1-209ENST00000479532 MARCH9Q86YJ5 346 aa5.84□□□□□ -1.47
SF3B1-209ENST00000479532 ERI1Q8IV48 349 aaKnown RBP5.84□□□□□ -1.47
SF3B1-209ENST00000479532 TMEM151BQ8IW70 566 aa5.84□□□□□ -1.47
SF3B1-209ENST00000479532 LAS2Q8IYD9 372 aa5.84□□□□□ -1.47
SF3B1-209ENST00000479532 OR4N4Q8N0Y3 316 aa5.84□□□□□ -1.47
SF3B1-209ENST00000479532 CDYL2Q8N8U2 506 aa5.84□□□□□ -1.47
SF3B1-209ENST00000479532 HIPK4Q8NE63 616 aa5.84□□□□□ -1.47
SF3B1-209ENST00000479532 NLGN4YQ8NFZ3 816 aaPredicted RBP5.84□□□□□ -1.47
SF3B1-209ENST00000479532 OR7G3Q8NG95 312 aa5.84□□□□□ -1.47
SF3B1-209ENST00000479532 OR52B6Q8NGF0 335 aa5.84□□□□□ -1.47
SF3B1-209ENST00000479532 METTL6Q8TCB7 284 aa5.84□□□□□ -1.47
SF3B1-209ENST00000479532 NT5CQ8TCD5 201 aa5.84□□□□□ -1.47
SF3B1-209ENST00000479532 CKAP2Q8WWK9 683 aa5.84□□□□□ -1.47
SF3B1-209ENST00000479532 SELENOMQ8WWX9 145 aa5.84□□□□□ -1.47
SF3B1-209ENST00000479532 STARD8Q92502 1023 aa5.84□□□□□ -1.47
SF3B1-209ENST00000479532 KIAA1143Q96AT1 154 aaPredicted RBP5.84□□□□□ -1.47
SF3B1-209ENST00000479532 PRR11Q96HE9 360 aaPredicted RBP5.84□□□□□ -1.47
SF3B1-209ENST00000479532 MED30Q96HR3 178 aa5.84□□□□□ -1.47
SF3B1-209ENST00000479532 MAGEB18Q96M61 343 aa5.84□□□□□ -1.47
SF3B1-209ENST00000479532 LRFN5Q96NI6 719 aa5.84□□□□□ -1.47
SF3B1-209ENST00000479532 ZNF285Q96NJ3 590 aa5.84□□□□□ -1.47
SF3B1-209ENST00000479532 FRG2BQ96QU4 278 aa5.84□□□□□ -1.47
SF3B1-209ENST00000479532 SERPINI1Q99574 410 aa5.84□□□□□ -1.47
SF3B1-209ENST00000479532 ELAC2Q9BQ52 826 aaKnown RBP5.84□□□□□ -1.47
SF3B1-209ENST00000479532 GATA5Q9BWX5 397 aaPredicted RBP5.84□□□□□ -1.47
SF3B1-209ENST00000479532 REXO4Q9GZR2 422 aaKnown RBP5.84□□□□□ -1.47
SF3B1-209ENST00000479532 SPRTNQ9H040 489 aaPredicted RBP5.84□□□□□ -1.47
SF3B1-209ENST00000479532 ILKAPQ9H0C8 392 aaPredicted RBP5.84□□□□□ -1.47
SF3B1-209ENST00000479532 RHBGQ9H310 441 aa5.84□□□□□ -1.47
SF3B1-209ENST00000479532 BRF2Q9HAW0 419 aa5.84□□□□□ -1.47
SF3B1-209ENST00000479532 ANKHQ9HCJ1 492 aa5.84□□□□□ -1.47
SF3B1-209ENST00000479532 ZBTB26Q9HCK0 441 aa5.84□□□□□ -1.47
SF3B1-209ENST00000479532 MLXIPLQ9NP71 852 aa5.84□□□□□ -1.47
SF3B1-209ENST00000479532 STARD5Q9NSY2 213 aa5.84□□□□□ -1.47
SF3B1-209ENST00000479532 CUTCQ9NTM9 273 aa5.84□□□□□ -1.47
SF3B1-209ENST00000479532 CCM2LQ9NUG4 571 aaPredicted RBP5.84□□□□□ -1.47
SF3B1-209ENST00000479532 FGFR1OP2Q9NVK5 253 aa5.84□□□□□ -1.47
SF3B1-209ENST00000479532 FKBP14Q9NWM8 211 aa5.84□□□□□ -1.47
SF3B1-209ENST00000479532 AHSPQ9NZD4 102 aa5.84□□□□□ -1.47
SF3B1-209ENST00000479532 RUVBL1Q9Y265 456 aaKnown RBP5.84□□□□□ -1.47
SF3B1-209ENST00000479532 B3GNT3Q9Y2A9 372 aa5.84□□□□□ -1.47
SF3B1-209ENST00000479532 RNF11Q9Y3C5 154 aa5.84□□□□□ -1.47
SF3B1-209ENST00000479532 TSC22D4Q9Y3Q8 395 aa5.84□□□□□ -1.47
SF3B1-209ENST00000479532 TMEM184BQ9Y519 407 aaPredicted RBP5.84□□□□□ -1.47
SF3B1-209ENST00000479532 SPACA6W5XKT8 324 aa5.84□□□□□ -1.47
SF3B1-209ENST00000479532 KIF26BQ2KJY2 2108 aa5.84□□□□□ -1.47
SF3B1-209ENST00000479532 WDR87Q6ZQQ6 2873 aa5.83□□□□□ -1.48
SF3B1-209ENST00000479532 CNOT1A5YKK6 2376 aaKnown RBP5.83□□□□□ -1.48
SF3B1-209ENST00000479532 TMEM8BA6NDV4 472 aa5.83□□□□□ -1.48
SF3B1-209ENST00000479532 H0YIG0 161 aa5.83□□□□□ -1.48
SF3B1-209ENST00000479532 PSMD12O00232 456 aaPredicted RBP5.83□□□□□ -1.48
SF3B1-209ENST00000479532 SLC28A1O00337 649 aa5.83□□□□□ -1.48
SF3B1-209ENST00000479532 FBP2O00757 339 aa5.83□□□□□ -1.48
SF3B1-209ENST00000479532 FFAR3O14843 346 aa5.83□□□□□ -1.48
SF3B1-209ENST00000479532 AZIN1O14977 448 aa5.83□□□□□ -1.48
SF3B1-209ENST00000479532 GPR42O15529 346 aa5.83□□□□□ -1.48
SF3B1-209ENST00000479532 RRP8O43159 456 aaKnown RBP5.83□□□□□ -1.48
SF3B1-209ENST00000479532 RGS14O43566 566 aa5.83□□□□□ -1.48
SF3B1-209ENST00000479532 RAD1O60671 282 aa5.83□□□□□ -1.48
SF3B1-209ENST00000479532 NSA2O95478 260 aaKnown RBP5.83□□□□□ -1.48
SF3B1-209ENST00000479532 DHRS4L1P0CG22 281 aa5.83□□□□□ -1.48
SF3B1-209ENST00000479532 CD22P20273 847 aa5.83□□□□□ -1.48
SF3B1-209ENST00000479532 FBLP22087 321 aaKnown RBP5.83□□□□□ -1.48
SF3B1-209ENST00000479532 STAT5AP42229 794 aa5.83□□□□□ -1.48
SF3B1-209ENST00000479532 TSFMP43897 325 aaKnown RBP5.83□□□□□ -1.48
SF3B1-209ENST00000479532 SLC1A6P48664 564 aa5.83□□□□□ -1.48
SF3B1-209ENST00000479532 ARFIP1P53367 373 aa5.83□□□□□ -1.48
SF3B1-209ENST00000479532 RPS15P62841 145 aaKnown RBP5.83□□□□□ -1.48
SF3B1-209ENST00000479532 DCDP81605 110 aaKnown RBP5.83□□□□□ -1.48
SF3B1-209ENST00000479532 CSTF3Q12996 717 aaKnown RBP5.83□□□□□ -1.48
SF3B1-209ENST00000479532 FAM53BQ14153 422 aa5.83□□□□□ -1.48
SF3B1-209ENST00000479532 HKDC1Q2TB90 917 aa5.83□□□□□ -1.48
SF3B1-209ENST00000479532 PRTGQ2VWP7 1150 aa5.83□□□□□ -1.48
SF3B1-209ENST00000479532 TRMT5Q32P41 509 aaKnown RBP5.83□□□□□ -1.48
SF3B1-209ENST00000479532 SGO1Q5FBB7 561 aa5.83□□□□□ -1.48
SF3B1-209ENST00000479532 ARL13AQ5H913 290 aaPredicted RBP5.83□□□□□ -1.48
SF3B1-209ENST00000479532 NDUFAF5Q5TEU4 345 aa5.83□□□□□ -1.48
SF3B1-209ENST00000479532 ARHGAP40Q5TG30 622 aa5.83□□□□□ -1.48
SF3B1-209ENST00000479532 ZCCHC23Q6ZST2 131 aa5.83□□□□□ -1.48
SF3B1-209ENST00000479532 RPS27LQ71UM5 84 aaKnown RBP5.83□□□□□ -1.48
SF3B1-209ENST00000479532 PAGE2Q7Z2X7 111 aa5.83□□□□□ -1.48
SF3B1-209ENST00000479532 VN1R4Q7Z5H5 301 aa5.83□□□□□ -1.48
SF3B1-209ENST00000479532 SYVN1Q86TM6 617 aa5.83□□□□□ -1.48
SF3B1-209ENST00000479532 CXorf67Q86X51 503 aaPredicted RBP5.83□□□□□ -1.48
SF3B1-209ENST00000479532 DSELQ8IZU8 1212 aa5.83□□□□□ -1.48
SF3B1-209ENST00000479532 CLYBLQ8N0X4 340 aa5.83□□□□□ -1.48
SF3B1-209ENST00000479532 FITM2Q8N6M3 262 aa5.83□□□□□ -1.48
SF3B1-209ENST00000479532 ANKRD53Q8N9V6 530 aa5.83□□□□□ -1.48
SF3B1-209ENST00000479532 SPERTQ8NA61 448 aa5.83□□□□□ -1.48
SF3B1-209ENST00000479532 ZNF248Q8NDW4 579 aa5.83□□□□□ -1.48
SF3B1-209ENST00000479532 ZNF740Q8NDX6 193 aa5.83□□□□□ -1.48
SF3B1-209ENST00000479532 HUS1BQ8NHY5 278 aa5.83□□□□□ -1.48
SF3B1-209ENST00000479532 ZCCHC10Q8TBK6 192 aa5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms