RNA–Protein interactions for RNA: ENST00000478934.5

VPS52-217, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 2,602 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-217ENST00000478934 ERGP11308 486 aa10.21□□□□□ -0.78
VPS52-217ENST00000478934 VASPP50552 380 aaPredicted RBP10.21□□□□□ -0.78
VPS52-217ENST00000478934 RNF144AP50876 292 aaPredicted RBP10.21□□□□□ -0.78
VPS52-217ENST00000478934 MAP4K2Q12851 820 aa10.21□□□□□ -0.78
VPS52-217ENST00000478934 LASP1Q14847 261 aaKnown RBP10.21□□□□□ -0.78
VPS52-217ENST00000478934 IRF4Q15306 451 aa10.21□□□□□ -0.78
VPS52-217ENST00000478934 TAB1Q15750 504 aa10.21□□□□□ -0.78
VPS52-217ENST00000478934 LRIT3Q3SXY7 679 aa10.21□□□□□ -0.78
VPS52-217ENST00000478934 LIPKQ5VXJ0 399 aa10.21□□□□□ -0.78
VPS52-217ENST00000478934 NXNL2Q5VZ03 156 aa10.21□□□□□ -0.78
VPS52-217ENST00000478934 PLAG1Q6DJT9 500 aa10.21□□□□□ -0.78
VPS52-217ENST00000478934 OR4C11Q6IEV9 310 aa10.21□□□□□ -0.78
VPS52-217ENST00000478934 NUDT13Q86X67 352 aa10.21□□□□□ -0.78
VPS52-217ENST00000478934 LAX1Q8IWV1 398 aa10.21□□□□□ -0.78
VPS52-217ENST00000478934 MINDY2Q8NBR6 621 aa10.21□□□□□ -0.78
VPS52-217ENST00000478934 SIMC1Q8NDZ2 872 aa10.21□□□□□ -0.78
VPS52-217ENST00000478934 OR6T1Q8NGN1 323 aa10.21□□□□□ -0.78
VPS52-217ENST00000478934 GPR151Q8TDV0 419 aa10.21□□□□□ -0.78
VPS52-217ENST00000478934 CREB3L4Q8TEY5 395 aa10.21□□□□□ -0.78
VPS52-217ENST00000478934 CAPSLQ8WWF8 208 aa10.21□□□□□ -0.78
VPS52-217ENST00000478934 SMARCD2Q92925 531 aa10.21□□□□□ -0.78
VPS52-217ENST00000478934 RGMAQ96B86 450 aa10.21□□□□□ -0.78
VPS52-217ENST00000478934 AMDHD1Q96NU7 426 aa10.21□□□□□ -0.78
VPS52-217ENST00000478934 POLR2J3Q9H1A7 115 aaKnown RBP10.21□□□□□ -0.78
VPS52-217ENST00000478934 C6orf106Q9H6K1 298 aaPredicted RBP10.21□□□□□ -0.78
VPS52-217ENST00000478934 HHATLQ9HCP6 504 aa10.21□□□□□ -0.78
VPS52-217ENST00000478934 WASH6PQ9NQA3 447 aa10.21□□□□□ -0.78
VPS52-217ENST00000478934 CLN6Q9NWW5 311 aa10.21□□□□□ -0.78
VPS52-217ENST00000478934 A4GNTQ9UNA3 340 aa10.21□□□□□ -0.78
VPS52-217ENST00000478934 NTNG1Q9Y2I2 539 aa10.21□□□□□ -0.78
VPS52-217ENST00000478934 YARS2Q9Y2Z4 477 aaKnown RBP10.21□□□□□ -0.78
VPS52-217ENST00000478934 F5P12259 2224 aa10.21□□□□□ -0.78
VPS52-217ENST00000478934 KNL1Q8NG31 2342 aa10.21□□□□□ -0.78
VPS52-217ENST00000478934 TRBV23OR9-2A0A075B6M9 112 aa10.2□□□□□ -0.78
VPS52-217ENST00000478934 A0A1W2PR48 441 aa10.2□□□□□ -0.78
VPS52-217ENST00000478934 LRIT2A6NDA9 550 aa10.2□□□□□ -0.78
VPS52-217ENST00000478934 CCRL2O00421 344 aa10.2□□□□□ -0.78
VPS52-217ENST00000478934 TLX2O43763 284 aaPredicted RBP10.2□□□□□ -0.78
VPS52-217ENST00000478934 CSO75390 466 aaKnown RBP10.2□□□□□ -0.78
VPS52-217ENST00000478934 CHRM4P08173 479 aa10.2□□□□□ -0.78
VPS52-217ENST00000478934 OSMP13725 252 aa10.2□□□□□ -0.78
VPS52-217ENST00000478934 GJA4P35212 333 aa10.2□□□□□ -0.78
VPS52-217ENST00000478934 XKP51811 444 aa10.2□□□□□ -0.78
VPS52-217ENST00000478934 MLLT1Q03111 559 aaPredicted RBP10.2□□□□□ -0.78
VPS52-217ENST00000478934 FUT5Q11128 374 aa10.2□□□□□ -0.78
VPS52-217ENST00000478934 ELOAQ14241 798 aaKnown RBP10.2□□□□□ -0.78
VPS52-217ENST00000478934 ZNF181Q2M3W8 571 aa10.2□□□□□ -0.78
VPS52-217ENST00000478934 SPANXN2Q5MJ10 180 aa10.2□□□□□ -0.78
VPS52-217ENST00000478934 ACSM5Q6NUN0 579 aa10.2□□□□□ -0.78
VPS52-217ENST00000478934 PSRC1Q6PGN9 363 aaPredicted RBP10.2□□□□□ -0.78
VPS52-217ENST00000478934 SHFQ7M4L6 423 aa10.2□□□□□ -0.78
VPS52-217ENST00000478934 ZER1Q7Z7L7 766 aa10.2□□□□□ -0.78
VPS52-217ENST00000478934 HDDC3Q8N4P3 179 aa10.2□□□□□ -0.78
VPS52-217ENST00000478934 FAM46DQ8NEK8 389 aa10.2□□□□□ -0.78
VPS52-217ENST00000478934 ITPKCQ96DU7 683 aa10.2□□□□□ -0.78
VPS52-217ENST00000478934 CEP19Q96LK0 163 aa10.2□□□□□ -0.78
VPS52-217ENST00000478934 CAMK1GQ96NX5 476 aa10.2□□□□□ -0.78
VPS52-217ENST00000478934 MAPKAP1Q9BPZ7 522 aa10.2□□□□□ -0.78
VPS52-217ENST00000478934 RPP25Q9BUL9 199 aaKnown RBP10.2□□□□□ -0.78
VPS52-217ENST00000478934 ASPNQ9BXN1 380 aa10.2□□□□□ -0.78
VPS52-217ENST00000478934 FBXL12Q9NXK8 326 aa10.2□□□□□ -0.78
VPS52-217ENST00000478934 GPR52Q9Y2T5 361 aa10.2□□□□□ -0.78
VPS52-217ENST00000478934 GPR55Q9Y2T6 319 aaPredicted RBP10.2□□□□□ -0.78
VPS52-217ENST00000478934 HAT1O14929 419 aa10.2□□□□□ -0.78
VPS52-217ENST00000478934 TFECO14948 347 aaPredicted RBP10.2□□□□□ -0.78
VPS52-217ENST00000478934 ERI3O43414 337 aaKnown RBP10.2□□□□□ -0.78
VPS52-217ENST00000478934 MED26O95402 600 aa10.2□□□□□ -0.78
VPS52-217ENST00000478934 CA3P07451 260 aa10.2□□□□□ -0.78
VPS52-217ENST00000478934 HBQ1P09105 142 aa10.2□□□□□ -0.78
VPS52-217ENST00000478934 CLEC2LP0C7M8 214 aa10.2□□□□□ -0.78
VPS52-217ENST00000478934 MMP11P24347 488 aa10.2□□□□□ -0.78
VPS52-217ENST00000478934 TNFSF8P32971 234 aa10.2□□□□□ -0.78
VPS52-217ENST00000478934 BUD31P41223 144 aaPredicted RBP10.2□□□□□ -0.78
VPS52-217ENST00000478934 SLC15A1P46059 708 aa10.2□□□□□ -0.78
VPS52-217ENST00000478934 DAB2P98082 770 aa10.2□□□□□ -0.78
VPS52-217ENST00000478934 HYAL2Q12891 473 aa10.2□□□□□ -0.78
VPS52-217ENST00000478934 SLAMF1Q13291 335 aa10.2□□□□□ -0.78
VPS52-217ENST00000478934 FAM46CQ5VWP2 391 aa10.2□□□□□ -0.78
VPS52-217ENST00000478934 TMEM107Q6UX40 140 aa10.2□□□□□ -0.78
VPS52-217ENST00000478934 VITQ6UXI7 678 aa10.2□□□□□ -0.78
VPS52-217ENST00000478934 LINC00299Q6ZSB3 139 aa10.2□□□□□ -0.78
VPS52-217ENST00000478934 IQCHQ86VS3 1027 aa10.2□□□□□ -0.78
VPS52-217ENST00000478934 TMEM145Q8NBT3 493 aa10.2□□□□□ -0.78
VPS52-217ENST00000478934 ARSGQ96EG1 525 aa10.2□□□□□ -0.78
VPS52-217ENST00000478934 ZNF354BQ96LW1 612 aa10.2□□□□□ -0.78
VPS52-217ENST00000478934 PLA2G12AQ9BZM1 189 aa10.2□□□□□ -0.78
VPS52-217ENST00000478934 IGFLR1Q9H665 355 aa10.2□□□□□ -0.78
VPS52-217ENST00000478934 PELI2Q9HAT8 420 aa10.2□□□□□ -0.78
VPS52-217ENST00000478934 SLC25A19Q9HC21 320 aa10.2□□□□□ -0.78
VPS52-217ENST00000478934 SLC6A20Q9NP91 592 aa10.2□□□□□ -0.78
VPS52-217ENST00000478934 MUTYHQ9UIF7 546 aa10.2□□□□□ -0.78
VPS52-217ENST00000478934 AP1M2Q9Y6Q5 423 aa10.2□□□□□ -0.78
VPS52-217ENST00000478934 NUP210Q8TEM1 1887 aaPredicted RBP10.2□□□□□ -0.78
VPS52-217ENST00000478934 A0A0A6YYD5 115 aa10.2□□□□□ -0.78
VPS52-217ENST00000478934 C1QTNF3-AMACRE9PGA6 284 aa10.2□□□□□ -0.78
VPS52-217ENST00000478934 TAF4O00268 1085 aa10.2□□□□□ -0.78
VPS52-217ENST00000478934 SEMA3DO95025 777 aa10.2□□□□□ -0.78
VPS52-217ENST00000478934 KAT7O95251 611 aa10.2□□□□□ -0.78
VPS52-217ENST00000478934 EML2O95834 649 aa10.2□□□□□ -0.78
VPS52-217ENST00000478934 HMGN2P05204 90 aaKnown RBP10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms