RNA–Protein interactions for RNA: ENST00000477085.1

COL4A6-206, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best)

Gene COL4A6, Length 1,784 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-206ENST00000477085 OR56A1Q8NGH5 318 aa13.53□□□□□ -0.24
COL4A6-206ENST00000477085 RHBDD1Q8TEB9 315 aa13.53□□□□□ -0.24
COL4A6-206ENST00000477085 OR6C1Q96RD1 312 aa13.53□□□□□ -0.24
COL4A6-206ENST00000477085 GFM1Q96RP9 751 aaKnown RBP13.53□□□□□ -0.24
COL4A6-206ENST00000477085 KLHL4Q9C0H6 718 aa13.53□□□□□ -0.24
COL4A6-206ENST00000477085 CLK4Q9HAZ1 481 aaKnown RBP13.53□□□□□ -0.24
COL4A6-206ENST00000477085 EQTNQ9NQ60 294 aa13.53□□□□□ -0.24
COL4A6-206ENST00000477085 LANCL2Q9NS86 450 aa13.53□□□□□ -0.24
COL4A6-206ENST00000477085 MAT2BQ9NZL9 334 aa13.53□□□□□ -0.24
COL4A6-206ENST00000477085 NDOR1Q9UHB4 597 aa13.53□□□□□ -0.24
COL4A6-206ENST00000477085 BCHEP06276 602 aa13.53□□□□□ -0.24
COL4A6-206ENST00000477085 ZNF806P0C7X5 589 aa13.53□□□□□ -0.24
COL4A6-206ENST00000477085 SLC35E2P0CK97 266 aa13.53□□□□□ -0.24
COL4A6-206ENST00000477085 S1PR1P21453 382 aa13.53□□□□□ -0.24
COL4A6-206ENST00000477085 ACP1P24666 158 aa13.53□□□□□ -0.24
COL4A6-206ENST00000477085 FASP25445 335 aa13.53□□□□□ -0.24
COL4A6-206ENST00000477085 PDX1P52945 283 aa13.53□□□□□ -0.24
COL4A6-206ENST00000477085 SKP1P63208 163 aa13.53□□□□□ -0.24
COL4A6-206ENST00000477085 IGLV3-21P80748 117 aaPredicted RBP13.53□□□□□ -0.24
COL4A6-206ENST00000477085 PRR5P85299 388 aa13.53□□□□□ -0.24
COL4A6-206ENST00000477085 CHRNB3Q05901 458 aa13.53□□□□□ -0.24
COL4A6-206ENST00000477085 ZFP36L1Q07352 338 aaKnown RBP13.53□□□□□ -0.24
COL4A6-206ENST00000477085 SLC13A2Q13183 592 aa13.53□□□□□ -0.24
COL4A6-206ENST00000477085 DUSP8Q13202 625 aa13.53□□□□□ -0.24
COL4A6-206ENST00000477085 ATP6AP1Q15904 470 aa13.53□□□□□ -0.24
COL4A6-206ENST00000477085 IQCCQ4KMZ1 466 aa13.53□□□□□ -0.24
COL4A6-206ENST00000477085 CYBRD1Q53TN4 286 aa13.53□□□□□ -0.24
COL4A6-206ENST00000477085 CRB2Q5IJ48 1285 aa13.53□□□□□ -0.24
COL4A6-206ENST00000477085 EPHX4Q8IUS5 362 aa13.53□□□□□ -0.24
COL4A6-206ENST00000477085 SLC44A2Q8IWA5 706 aaPredicted RBP13.53□□□□□ -0.24
COL4A6-206ENST00000477085 ZNF595Q8IYB9 648 aa13.53□□□□□ -0.24
COL4A6-206ENST00000477085 GPR135Q8IZ08 494 aa13.53□□□□□ -0.24
COL4A6-206ENST00000477085 XAGE5Q8WWM1 108 aa13.53□□□□□ -0.24
COL4A6-206ENST00000477085 MOAP1Q96BY2 351 aa13.53□□□□□ -0.24
COL4A6-206ENST00000477085 CTHRC1Q96CG8 243 aa13.53□□□□□ -0.24
COL4A6-206ENST00000477085 MVB12AQ96EY5 273 aa13.53□□□□□ -0.24
COL4A6-206ENST00000477085 TMEM19Q96HH6 336 aa13.53□□□□□ -0.24
COL4A6-206ENST00000477085 SLC29A1Q99808 456 aa13.53□□□□□ -0.24
COL4A6-206ENST00000477085 NDC1Q9BTX1 674 aa13.53□□□□□ -0.24
COL4A6-206ENST00000477085 MAGIXQ9H6Y5 334 aa13.53□□□□□ -0.24
COL4A6-206ENST00000477085 RUBCNLQ9H714 662 aa13.53□□□□□ -0.24
COL4A6-206ENST00000477085 C3orf14Q9HBI5 128 aa13.53□□□□□ -0.24
COL4A6-206ENST00000477085 NECTIN3Q9NQS3 549 aa13.53□□□□□ -0.24
COL4A6-206ENST00000477085 PRTFDC1Q9NRG1 225 aa13.53□□□□□ -0.24
COL4A6-206ENST00000477085 SLC22A11Q9NSA0 550 aa13.53□□□□□ -0.24
COL4A6-206ENST00000477085 OCIAD1Q9NX40 245 aa13.53□□□□□ -0.24
COL4A6-206ENST00000477085 SAMD4AQ9UPU9 718 aaKnown RBP13.53□□□□□ -0.24
COL4A6-206ENST00000477085 C15orf41Q9Y2V0 281 aa13.53□□□□□ -0.24
COL4A6-206ENST00000477085 ZNF318Q5VUA4 2279 aa13.52□□□□□ -0.24
COL4A6-206ENST00000477085 PRAMEF25A6NGN4 478 aa13.52□□□□□ -0.25
COL4A6-206ENST00000477085 D6RAR5 112 aa13.52□□□□□ -0.25
COL4A6-206ENST00000477085 HRKO00198 91 aa13.52□□□□□ -0.25
COL4A6-206ENST00000477085 DSCR3O14972 297 aa13.52□□□□□ -0.25
COL4A6-206ENST00000477085 PEX1O43933 1283 aa13.52□□□□□ -0.25
COL4A6-206ENST00000477085 PGM3O95394 542 aa13.52□□□□□ -0.25
COL4A6-206ENST00000477085 ZNF26P17031 533 aaPredicted RBP13.52□□□□□ -0.25
COL4A6-206ENST00000477085 NT5EP21589 574 aa13.52□□□□□ -0.25
COL4A6-206ENST00000477085 NUBP1P53384 320 aa13.52□□□□□ -0.25
COL4A6-206ENST00000477085 KCNJ10P78508 379 aa13.52□□□□□ -0.25
COL4A6-206ENST00000477085 MAP7Q14244 749 aa13.52□□□□□ -0.25
COL4A6-206ENST00000477085 PWWP2BQ6NUJ5 590 aa13.52□□□□□ -0.25
COL4A6-206ENST00000477085 REEP3Q6NUK4 255 aa13.52□□□□□ -0.25
COL4A6-206ENST00000477085 IZUMO2Q6UXV1 221 aa13.52□□□□□ -0.25
COL4A6-206ENST00000477085 TSEN54Q7Z6J9 526 aaKnown RBP13.52□□□□□ -0.25
COL4A6-206ENST00000477085 TMEM151BQ8IW70 566 aa13.52□□□□□ -0.25
COL4A6-206ENST00000477085 SLC35A4Q96G79 324 aa13.52□□□□□ -0.25
COL4A6-206ENST00000477085 CENPNQ96H22 339 aaPredicted RBP13.52□□□□□ -0.25
COL4A6-206ENST00000477085 HSH2DQ96JZ2 352 aa13.52□□□□□ -0.25
COL4A6-206ENST00000477085 OR7D2Q96RA2 312 aa13.52□□□□□ -0.25
COL4A6-206ENST00000477085 DPYSL5Q9BPU6 564 aa13.52□□□□□ -0.25
COL4A6-206ENST00000477085 ALOXE3Q9BYJ1 711 aa13.52□□□□□ -0.25
COL4A6-206ENST00000477085 COQ10BQ9H8M1 238 aa13.52□□□□□ -0.25
COL4A6-206ENST00000477085 APMAPQ9HDC9 416 aa13.52□□□□□ -0.25
COL4A6-206ENST00000477085 DDX18Q9NVP1 670 aaKnown RBP13.52□□□□□ -0.25
COL4A6-206ENST00000477085 PTGFRNQ9P2B2 879 aa13.52□□□□□ -0.25
COL4A6-206ENST00000477085 TRPC4Q9UBN4 977 aa13.52□□□□□ -0.25
COL4A6-206ENST00000477085 C19orf53Q9UNZ5 99 aaPredicted RBP13.52□□□□□ -0.25
COL4A6-206ENST00000477085 ACOX3O15254 700 aa13.51□□□□□ -0.25
COL4A6-206ENST00000477085 CLOCKO15516 846 aa13.51□□□□□ -0.25
COL4A6-206ENST00000477085 FLRT2O43155 660 aa13.51□□□□□ -0.25
COL4A6-206ENST00000477085 PLOD3O60568 738 aa13.51□□□□□ -0.25
COL4A6-206ENST00000477085 PRSS23O95084 383 aa13.51□□□□□ -0.25
COL4A6-206ENST00000477085 MAGEA2P43356 314 aa13.51□□□□□ -0.25
COL4A6-206ENST00000477085 AQP4P55087 323 aa13.51□□□□□ -0.25
COL4A6-206ENST00000477085 SELENOWP63302 87 aa13.51□□□□□ -0.25
COL4A6-206ENST00000477085 ACY1Q03154 408 aa13.51□□□□□ -0.25
COL4A6-206ENST00000477085 TCF15Q12870 199 aa13.51□□□□□ -0.25
COL4A6-206ENST00000477085 EXOSC7Q15024 291 aaKnown RBP13.51□□□□□ -0.25
COL4A6-206ENST00000477085 GRAMD1BQ3KR37 738 aa13.51□□□□□ -0.25
COL4A6-206ENST00000477085 CYP27C1Q4G0S4 372 aa13.51□□□□□ -0.25
COL4A6-206ENST00000477085 EXOSC6Q5RKV6 272 aaKnown RBP13.51□□□□□ -0.25
COL4A6-206ENST00000477085 PHF19Q5T6S3 580 aa13.51□□□□□ -0.25
COL4A6-206ENST00000477085 MFSD12Q6NUT3 480 aa13.51□□□□□ -0.25
COL4A6-206ENST00000477085 BHLHB9Q6PI77 547 aa13.51□□□□□ -0.25
COL4A6-206ENST00000477085 MED25Q71SY5 747 aa13.51□□□□□ -0.25
COL4A6-206ENST00000477085 LGI4Q8N135 537 aa13.51□□□□□ -0.25
COL4A6-206ENST00000477085 SLC16A11Q8NCK7 471 aa13.51□□□□□ -0.25
COL4A6-206ENST00000477085 ICA1LQ8NDH6 482 aa13.51□□□□□ -0.25
COL4A6-206ENST00000477085 ZNF675Q8TD23 568 aa13.51□□□□□ -0.25
COL4A6-206ENST00000477085 TPD52L3Q96J77 140 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms