RNA–Protein interactions for RNA: ENST00000476590.1

CD55-208, Transcript of CD55 molecule (Cromer blood group), humanhuman

TSL 1 (best)

Gene CD55, Length 2,163 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD55-208ENST00000476590 PTCRAQ6ISU1 281 aaPredicted RBP3.95□□□□□ -1.78
CD55-208ENST00000476590 LCN8Q6JVE9 175 aa3.95□□□□□ -1.78
CD55-208ENST00000476590 PGBD2Q6P3X8 592 aa3.95□□□□□ -1.78
CD55-208ENST00000476590 FAM198BQ6UWH4 519 aa3.95□□□□□ -1.78
CD55-208ENST00000476590 TMEM107Q6UX40 140 aa3.95□□□□□ -1.78
CD55-208ENST00000476590 HACD2Q6Y1H2 254 aa3.95□□□□□ -1.78
CD55-208ENST00000476590 QSOX2Q6ZRP7 698 aa3.95□□□□□ -1.78
CD55-208ENST00000476590 C1orf229Q6ZS94 237 aaPredicted RBP3.95□□□□□ -1.78
CD55-208ENST00000476590 CXXC5Q7LFL8 322 aaKnown RBP3.95□□□□□ -1.78
CD55-208ENST00000476590 P4HA3Q7Z4N8 544 aa3.95□□□□□ -1.78
CD55-208ENST00000476590 ZSCAN2Q7Z7L9 614 aaPredicted RBP3.95□□□□□ -1.78
CD55-208ENST00000476590 RBM23Q86U06 439 aaKnown RBP3.95□□□□□ -1.78
CD55-208ENST00000476590 THOC6Q86W42 341 aaKnown RBP3.95□□□□□ -1.78
CD55-208ENST00000476590 RNF130Q86XS8 419 aa3.95□□□□□ -1.78
CD55-208ENST00000476590 MISPQ8IVT2 679 aa3.95□□□□□ -1.78
CD55-208ENST00000476590 DNAJC10Q8IXB1 793 aa3.95□□□□□ -1.78
CD55-208ENST00000476590 STK40Q8N2I9 435 aa3.95□□□□□ -1.78
CD55-208ENST00000476590 MINDY1Q8N5J2 469 aa3.95□□□□□ -1.78
CD55-208ENST00000476590 ZNF655Q8N720 491 aaPredicted RBP3.95□□□□□ -1.78
CD55-208ENST00000476590 C4orf32Q8N8J7 132 aa3.95□□□□□ -1.78
CD55-208ENST00000476590 POGLUT1Q8NBL1 392 aa3.95□□□□□ -1.78
CD55-208ENST00000476590 AGBL5Q8NDL9 886 aa3.95□□□□□ -1.78
CD55-208ENST00000476590 OR4Q3Q8NH05 313 aa3.95□□□□□ -1.78
CD55-208ENST00000476590 MRGPRDQ8TDS7 321 aa3.95□□□□□ -1.78
CD55-208ENST00000476590 C16orf78Q8WTQ4 265 aa3.95□□□□□ -1.78
CD55-208ENST00000476590 LIPHQ8WWY8 451 aa3.95□□□□□ -1.78
CD55-208ENST00000476590 OIT3Q8WWZ8 545 aa3.95□□□□□ -1.78
CD55-208ENST00000476590 TM9SF4Q92544 642 aa3.95□□□□□ -1.78
CD55-208ENST00000476590 WNT8BQ93098 351 aa3.95□□□□□ -1.78
CD55-208ENST00000476590 KIAA1143Q96AT1 154 aaPredicted RBP3.95□□□□□ -1.78
CD55-208ENST00000476590 CREB3L1Q96BA8 519 aa3.95□□□□□ -1.78
CD55-208ENST00000476590 SCRN2Q96FV2 425 aa3.95□□□□□ -1.78
CD55-208ENST00000476590 PDLIM5Q96HC4 596 aaKnown RBP3.95□□□□□ -1.78
CD55-208ENST00000476590 BOD1Q96IK1 185 aa3.95□□□□□ -1.78
CD55-208ENST00000476590 HIST1H2AHQ96KK5 128 aa3.95□□□□□ -1.78
CD55-208ENST00000476590 KLHL5Q96PQ7 755 aa3.95□□□□□ -1.78
CD55-208ENST00000476590 HIST1H2AJQ99878 128 aa3.95□□□□□ -1.78
CD55-208ENST00000476590 ZNF2Q9BSG1 426 aaPredicted RBP3.95□□□□□ -1.78
CD55-208ENST00000476590 MRI1Q9BV20 369 aa3.95□□□□□ -1.78
CD55-208ENST00000476590 RAB34Q9BZG1 259 aa3.95□□□□□ -1.78
CD55-208ENST00000476590 MUC13Q9H3R2 512 aa3.95□□□□□ -1.78
CD55-208ENST00000476590 NXF3Q9H4D5 531 aaKnown RBP3.95□□□□□ -1.78
CD55-208ENST00000476590 RNF146Q9NTX7 359 aa3.95□□□□□ -1.78
CD55-208ENST00000476590 DECR2Q9NUI1 292 aa3.95□□□□□ -1.78
CD55-208ENST00000476590 ABCB8Q9NUT2 735 aa3.95□□□□□ -1.78
CD55-208ENST00000476590 FAM118AQ9NWS6 357 aa3.95□□□□□ -1.78
CD55-208ENST00000476590 GTSE1Q9NYZ3 720 aa3.95□□□□□ -1.78
CD55-208ENST00000476590 C5AR2Q9P296 337 aa3.95□□□□□ -1.78
CD55-208ENST00000476590 APOBEC3BQ9UH17 382 aaKnown RBP3.95□□□□□ -1.78
CD55-208ENST00000476590 ZNF222Q9UK12 451 aa3.95□□□□□ -1.78
CD55-208ENST00000476590 ING1Q9UK53 422 aaPredicted RBP3.95□□□□□ -1.78
CD55-208ENST00000476590 POMT2Q9UKY4 750 aa3.95□□□□□ -1.78
CD55-208ENST00000476590 TBX20Q9UMR3 447 aa3.95□□□□□ -1.78
CD55-208ENST00000476590 PPIEQ9UNP9 301 aaKnown RBP3.95□□□□□ -1.78
CD55-208ENST00000476590 MINPP1Q9UNW1 487 aa3.95□□□□□ -1.78
CD55-208ENST00000476590 AKT3Q9Y243 479 aa3.95□□□□□ -1.78
CD55-208ENST00000476590 LRP6O75581 1613 aa3.94□□□□□ -1.78
CD55-208ENST00000476590 LAMB4A4D0S4 1761 aa3.94□□□□□ -1.78
CD55-208ENST00000476590 CAMTA1Q9Y6Y1 1673 aa3.94□□□□□ -1.78
CD55-208ENST00000476590 A0A0U1RQF3 1178 aa3.94□□□□□ -1.78
CD55-208ENST00000476590 FAM240BA0A1B0GVZ2 78 aa3.94□□□□□ -1.78
CD55-208ENST00000476590 A0A1W2PP55 124 aa3.94□□□□□ -1.78
CD55-208ENST00000476590 XKRY2A2RUG3 117 aa3.94□□□□□ -1.78
CD55-208ENST00000476590 NPIPB9F8W1W9 429 aa3.94□□□□□ -1.78
CD55-208ENST00000476590 INMT-MINDY4F8WBC2 141 aa3.94□□□□□ -1.78
CD55-208ENST00000476590 TEX46H3BTG2 121 aa3.94□□□□□ -1.78
CD55-208ENST00000476590 M0QYT0 321 aa3.94□□□□□ -1.78
CD55-208ENST00000476590 AP4M1O00189 453 aa3.94□□□□□ -1.78
CD55-208ENST00000476590 DVL2O14641 736 aa3.94□□□□□ -1.78
CD55-208ENST00000476590 PLA2G10O15496 165 aa3.94□□□□□ -1.78
CD55-208ENST00000476590 DHX15O43143 795 aaKnown RBP3.94□□□□□ -1.78
CD55-208ENST00000476590 SLC25A17O43808 307 aa3.94□□□□□ -1.78
CD55-208ENST00000476590 ITGA10O75578 1167 aa3.94□□□□□ -1.78
CD55-208ENST00000476590 AHSA1O95433 338 aa3.94□□□□□ -1.78
CD55-208ENST00000476590 MT-ND2P03891 347 aa3.94□□□□□ -1.78
CD55-208ENST00000476590 THBS1P07996 1170 aa3.94□□□□□ -1.78
CD55-208ENST00000476590 MMP3P08254 477 aa3.94□□□□□ -1.78
CD55-208ENST00000476590 CSF3P09919 207 aa3.94□□□□□ -1.78
CD55-208ENST00000476590 NPSP0C0P6 89 aa3.94□□□□□ -1.78
CD55-208ENST00000476590 OR8U8P0C7N1 319 aa3.94□□□□□ -1.78
CD55-208ENST00000476590 METTL15P1P0C7V9 234 aa3.94□□□□□ -1.78
CD55-208ENST00000476590 HAPLN1P10915 354 aaPredicted RBP3.94□□□□□ -1.78
CD55-208ENST00000476590 G6PDP11413 515 aa3.94□□□□□ -1.78
CD55-208ENST00000476590 DAOP14920 347 aa3.94□□□□□ -1.78
CD55-208ENST00000476590 ENGP17813 658 aa3.94□□□□□ -1.78
CD55-208ENST00000476590 GADD45AP24522 165 aa3.94□□□□□ -1.78
CD55-208ENST00000476590 AZGP1P25311 298 aaKnown RBP3.94□□□□□ -1.78
CD55-208ENST00000476590 BDKRB2P30411 391 aa3.94□□□□□ -1.78
CD55-208ENST00000476590 GRK5P34947 590 aa3.94□□□□□ -1.78
CD55-208ENST00000476590 CDK8P49336 464 aa3.94□□□□□ -1.78
CD55-208ENST00000476590 CSNK1EP49674 416 aaKnown RBP3.94□□□□□ -1.78
CD55-208ENST00000476590 CLCN7P51798 805 aa3.94□□□□□ -1.78
CD55-208ENST00000476590 PRKXP51817 358 aa3.94□□□□□ -1.78
CD55-208ENST00000476590 NAGLUP54802 743 aa3.94□□□□□ -1.78
CD55-208ENST00000476590 ISL1P61371 349 aa3.94□□□□□ -1.78
CD55-208ENST00000476590 SLC35A2P78381 396 aa3.94□□□□□ -1.78
CD55-208ENST00000476590 FOXO4P98177 505 aa3.94□□□□□ -1.78
CD55-208ENST00000476590 REEP5Q00765 189 aa3.94□□□□□ -1.78
CD55-208ENST00000476590 SP3Q02447 781 aa3.94□□□□□ -1.78
CD55-208ENST00000476590 GABPAQ06546 454 aa3.94□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms