RNA–Protein interactions for RNA: ENST00000476367.5

CCNL1-217, Transcript of cyclin L1, humanhuman

TSL 1 (best)

Gene CCNL1, Length 1,603 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-217ENST00000476367 VMP1Q96GC9 406 aa13.39□□□□□ -0.27
CCNL1-217ENST00000476367 AMDHD1Q96NU7 426 aa13.39□□□□□ -0.27
CCNL1-217ENST00000476367 PELOQ9BRX2 385 aaKnown RBP13.39□□□□□ -0.27
CCNL1-217ENST00000476367 CNPPD1Q9BV87 410 aa13.39□□□□□ -0.27
CCNL1-217ENST00000476367 DPY30Q9C005 99 aa13.39□□□□□ -0.27
CCNL1-217ENST00000476367 ANKRA2Q9H9E1 313 aa13.39□□□□□ -0.27
CCNL1-217ENST00000476367 CXorf21Q9HAI6 301 aa13.39□□□□□ -0.27
CCNL1-217ENST00000476367 ZIM2Q9NZV7 527 aa13.39□□□□□ -0.27
CCNL1-217ENST00000476367 SH3BP4Q9P0V3 963 aa13.39□□□□□ -0.27
CCNL1-217ENST00000476367 ZNF639Q9UID6 485 aa13.39□□□□□ -0.27
CCNL1-217ENST00000476367 ZNF451Q9Y4E5 1061 aa13.39□□□□□ -0.27
CCNL1-217ENST00000476367 SPTA1P02549 2419 aa13.39□□□□□ -0.27
CCNL1-217ENST00000476367 DYRK3O43781 588 aa13.39□□□□□ -0.27
CCNL1-217ENST00000476367 SLC22A3O75751 556 aa13.39□□□□□ -0.27
CCNL1-217ENST00000476367 C1QCP02747 245 aa13.39□□□□□ -0.27
CCNL1-217ENST00000476367 IGKV3-11P04433 115 aa13.39□□□□□ -0.27
CCNL1-217ENST00000476367 ST13P50502 369 aaKnown RBP13.39□□□□□ -0.27
CCNL1-217ENST00000476367 UBAP2LQ14157 1087 aaKnown RBP13.39□□□□□ -0.27
CCNL1-217ENST00000476367 FAM174BQ3ZCQ3 159 aa13.39□□□□□ -0.27
CCNL1-217ENST00000476367 CRB2Q5IJ48 1285 aa13.39□□□□□ -0.27
CCNL1-217ENST00000476367 FHL5Q5TD97 284 aa13.39□□□□□ -0.27
CCNL1-217ENST00000476367 OR4F3Q6IEY1 312 aa13.39□□□□□ -0.27
CCNL1-217ENST00000476367 FAM111BQ6SJ93 734 aa13.39□□□□□ -0.27
CCNL1-217ENST00000476367 ISLR2Q6UXK2 745 aa13.39□□□□□ -0.27
CCNL1-217ENST00000476367 ZNF551Q7Z340 670 aaPredicted RBP13.39□□□□□ -0.27
CCNL1-217ENST00000476367 LSM14AQ8ND56 463 aaKnown RBP13.39□□□□□ -0.27
CCNL1-217ENST00000476367 ELP5Q8TE02 316 aa13.39□□□□□ -0.27
CCNL1-217ENST00000476367 PPCDCQ96CD2 204 aa13.39□□□□□ -0.27
CCNL1-217ENST00000476367 MYLK2Q9H1R3 596 aa13.39□□□□□ -0.27
CCNL1-217ENST00000476367 SIRT3Q9NTG7 399 aaPredicted RBP13.39□□□□□ -0.27
CCNL1-217ENST00000476367 MAT2BQ9NZL9 334 aa13.39□□□□□ -0.27
CCNL1-217ENST00000476367 COPS7AQ9UBW8 275 aa13.39□□□□□ -0.27
CCNL1-217ENST00000476367 PSME2Q9UL46 239 aa13.39□□□□□ -0.27
CCNL1-217ENST00000476367 ENTPD4Q9Y227 616 aa13.39□□□□□ -0.27
CCNL1-217ENST00000476367 ZNF780BQ9Y6R6 833 aa13.39□□□□□ -0.27
CCNL1-217ENST00000476367 COL6A6A6NMZ7 2263 aa13.38□□□□□ -0.27
CCNL1-217ENST00000476367 EIF4E1BA6NMX2 242 aaKnown RBP13.38□□□□□ -0.27
CCNL1-217ENST00000476367 F10P00742 488 aa13.38□□□□□ -0.27
CCNL1-217ENST00000476367 CSNK2A2P19784 350 aaPredicted RBP13.38□□□□□ -0.27
CCNL1-217ENST00000476367 NCF2P19878 526 aaPredicted RBP13.38□□□□□ -0.27
CCNL1-217ENST00000476367 NT5EP21589 574 aa13.38□□□□□ -0.27
CCNL1-217ENST00000476367 SOX11P35716 441 aa13.38□□□□□ -0.27
CCNL1-217ENST00000476367 CD97P48960 835 aa13.38□□□□□ -0.27
CCNL1-217ENST00000476367 CLCN2P51788 898 aa13.38□□□□□ -0.27
CCNL1-217ENST00000476367 MRPS35P82673 323 aaKnown RBP13.38□□□□□ -0.27
CCNL1-217ENST00000476367 RCAN2Q14206 197 aa13.38□□□□□ -0.27
CCNL1-217ENST00000476367 ZNF267Q14586 743 aaPredicted RBP13.38□□□□□ -0.27
CCNL1-217ENST00000476367 SPRED3Q2MJR0 410 aa13.38□□□□□ -0.27
CCNL1-217ENST00000476367 ZNF628Q5EBL2 1059 aa13.38□□□□□ -0.27
CCNL1-217ENST00000476367 C6orf163Q5TEZ5 329 aa13.38□□□□□ -0.27
CCNL1-217ENST00000476367 ABHD17BQ5VST6 288 aa13.38□□□□□ -0.27
CCNL1-217ENST00000476367 BLOC1S3Q6QNY0 202 aa13.38□□□□□ -0.27
CCNL1-217ENST00000476367 GALNT12Q8IXK2 581 aa13.38□□□□□ -0.27
CCNL1-217ENST00000476367 CLECL1Q8IZS7 167 aa13.38□□□□□ -0.27
CCNL1-217ENST00000476367 MIER2Q8N344 545 aa13.38□□□□□ -0.27
CCNL1-217ENST00000476367 LRRC25Q8N386 305 aaPredicted RBP13.38□□□□□ -0.27
CCNL1-217ENST00000476367 SLC5A8Q8N695 610 aa13.38□□□□□ -0.27
CCNL1-217ENST00000476367 MORN4Q8NDC4 146 aa13.38□□□□□ -0.27
CCNL1-217ENST00000476367 OR9A2Q8NGT5 310 aa13.38□□□□□ -0.27
CCNL1-217ENST00000476367 ZNF721Q8TF20 911 aa13.38□□□□□ -0.27
CCNL1-217ENST00000476367 RIT1Q92963 219 aa13.38□□□□□ -0.27
CCNL1-217ENST00000476367 EPS8L2Q9H6S3 715 aa13.38□□□□□ -0.27
CCNL1-217ENST00000476367 SERHLQ9NQF3 203 aa13.38□□□□□ -0.27
CCNL1-217ENST00000476367 SLC6A13Q9NSD5 602 aa13.38□□□□□ -0.27
CCNL1-217ENST00000476367 GIMAP4Q9NUV9 329 aa13.38□□□□□ -0.27
CCNL1-217ENST00000476367 ERVK-19Q9WJR5 959 aa13.38□□□□□ -0.27
CCNL1-217ENST00000476367 CFAP46Q8IYW2 2715 aa13.37□□□□□ -0.27
CCNL1-217ENST00000476367 PRKNO60260 465 aaPredicted RBP13.37□□□□□ -0.27
CCNL1-217ENST00000476367 MAN1A2O60476 641 aa13.37□□□□□ -0.27
CCNL1-217ENST00000476367 NME6O75414 186 aaPredicted RBP13.37□□□□□ -0.27
CCNL1-217ENST00000476367 PGRP06401 933 aa13.37□□□□□ -0.27
CCNL1-217ENST00000476367 CAPN3P20807 821 aa13.37□□□□□ -0.27
CCNL1-217ENST00000476367 GALNSP34059 522 aa13.37□□□□□ -0.27
CCNL1-217ENST00000476367 HPCAL1P37235 193 aa13.37□□□□□ -0.27
CCNL1-217ENST00000476367 MAP4K2Q12851 820 aa13.37□□□□□ -0.27
CCNL1-217ENST00000476367 BIKQ13323 160 aa13.37□□□□□ -0.27
CCNL1-217ENST00000476367 MFAP5Q13361 173 aa13.37□□□□□ -0.27
CCNL1-217ENST00000476367 SQLEQ14534 574 aa13.37□□□□□ -0.27
CCNL1-217ENST00000476367 TRMT12Q53H54 448 aaKnown RBP13.37□□□□□ -0.27
CCNL1-217ENST00000476367 CPTPQ5TA50 214 aa13.37□□□□□ -0.27
CCNL1-217ENST00000476367 R3HCC1LQ7Z5L2 792 aaKnown RBP13.37□□□□□ -0.27
CCNL1-217ENST00000476367 TREML1Q86YW5 311 aa13.37□□□□□ -0.27
CCNL1-217ENST00000476367 C7orf57Q8NEG2 295 aa13.37□□□□□ -0.27
CCNL1-217ENST00000476367 OR7G2Q8NG99 324 aa13.37□□□□□ -0.27
CCNL1-217ENST00000476367 OR1N1Q8NGS0 311 aa13.37□□□□□ -0.27
CCNL1-217ENST00000476367 PSMA8Q8TAA3 256 aa13.37□□□□□ -0.27
CCNL1-217ENST00000476367 VPS33AQ96AX1 596 aa13.37□□□□□ -0.27
CCNL1-217ENST00000476367 SENP5Q96HI0 755 aaPredicted RBP13.37□□□□□ -0.27
CCNL1-217ENST00000476367 FBXL20Q96IG2 436 aa13.37□□□□□ -0.27
CCNL1-217ENST00000476367 ART5Q96L15 291 aa13.37□□□□□ -0.27
CCNL1-217ENST00000476367 NPAS2Q99743 824 aa13.37□□□□□ -0.27
CCNL1-217ENST00000476367 DUSP26Q9BV47 211 aa13.37□□□□□ -0.27
CCNL1-217ENST00000476367 MFRPQ9BY79 579 aa13.37□□□□□ -0.27
CCNL1-217ENST00000476367 DEFB126Q9BYW3 111 aa13.37□□□□□ -0.27
CCNL1-217ENST00000476367 BHLHE41Q9C0J9 482 aaPredicted RBP13.37□□□□□ -0.27
CCNL1-217ENST00000476367 CCDC167Q9P0B6 97 aa13.37□□□□□ -0.27
CCNL1-217ENST00000476367 ARMCX1Q9P291 453 aa13.37□□□□□ -0.27
CCNL1-217ENST00000476367 TEKT2Q9UIF3 430 aa13.37□□□□□ -0.27
CCNL1-217ENST00000476367 PCDHGB7Q9Y5F8 929 aa13.37□□□□□ -0.27
CCNL1-217ENST00000476367 CSAG2Q9Y5P2 127 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms