RNA–Protein interactions for RNA: ENST00000475973.1

UBR4-212, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 600 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-212ENST00000475973 GCNT6Q5T4J0 391 aa6.5□□□□□ -1.37
UBR4-212ENST00000475973 MFSD4BQ5TF39 518 aa6.5□□□□□ -1.37
UBR4-212ENST00000475973 TCTN3Q6NUS6 607 aa6.5□□□□□ -1.37
UBR4-212ENST00000475973 ZNF544Q6NX49 715 aa6.5□□□□□ -1.37
UBR4-212ENST00000475973 BRAT1Q6PJG6 821 aa6.5□□□□□ -1.37
UBR4-212ENST00000475973 GDPD4Q6W3E5 623 aa6.5□□□□□ -1.37
UBR4-212ENST00000475973 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP6.5□□□□□ -1.37
UBR4-212ENST00000475973 CCDC81Q6ZN84 652 aa6.5□□□□□ -1.37
UBR4-212ENST00000475973 SYT13Q7L8C5 426 aa6.5□□□□□ -1.37
UBR4-212ENST00000475973 FAM129CQ86XR2 697 aa6.5□□□□□ -1.37
UBR4-212ENST00000475973 SLC44A2Q8IWA5 706 aaPredicted RBP6.5□□□□□ -1.37
UBR4-212ENST00000475973 BBS7Q8IWZ6 715 aa6.5□□□□□ -1.37
UBR4-212ENST00000475973 CELF2-AS1Q8N7Q2 184 aa6.5□□□□□ -1.37
UBR4-212ENST00000475973 PLA2G15Q8NCC3 412 aa6.5□□□□□ -1.37
UBR4-212ENST00000475973 DUSP18Q8NEJ0 188 aa6.5□□□□□ -1.37
UBR4-212ENST00000475973 FAM46DQ8NEK8 389 aa6.5□□□□□ -1.37
UBR4-212ENST00000475973 GPR32P1Q8NGA4 272 aa6.5□□□□□ -1.37
UBR4-212ENST00000475973 HUS1BQ8NHY5 278 aa6.5□□□□□ -1.37
UBR4-212ENST00000475973 C16orf78Q8WTQ4 265 aa6.5□□□□□ -1.37
UBR4-212ENST00000475973 SETD7Q8WTS6 366 aaKnown RBP6.5□□□□□ -1.37
UBR4-212ENST00000475973 REPS1Q96D71 796 aa6.5□□□□□ -1.37
UBR4-212ENST00000475973 OTUB2Q96DC9 234 aa6.5□□□□□ -1.37
UBR4-212ENST00000475973 NEURL3Q96EH8 262 aa6.5□□□□□ -1.37
UBR4-212ENST00000475973 CHFRQ96EP1 664 aa6.5□□□□□ -1.37
UBR4-212ENST00000475973 LOXL4Q96JB6 756 aa6.5□□□□□ -1.37
UBR4-212ENST00000475973 SPACA7Q96KW9 195 aa6.5□□□□□ -1.37
UBR4-212ENST00000475973 SLC30A2Q9BRI3 323 aa6.5□□□□□ -1.37
UBR4-212ENST00000475973 WRAP53Q9BUR4 548 aaKnown RBP6.5□□□□□ -1.37
UBR4-212ENST00000475973 EFCAB11Q9BUY7 163 aa6.5□□□□□ -1.37
UBR4-212ENST00000475973 JAM3Q9BX67 310 aa6.5□□□□□ -1.37
UBR4-212ENST00000475973 POLDIP3Q9BY77 421 aaKnown RBP6.5□□□□□ -1.37
UBR4-212ENST00000475973 GSX2Q9BZM3 304 aa6.5□□□□□ -1.37
UBR4-212ENST00000475973 TM6SF2Q9BZW4 377 aa6.5□□□□□ -1.37
UBR4-212ENST00000475973 MIXL1Q9H2W2 232 aa6.5□□□□□ -1.37
UBR4-212ENST00000475973 RHBGQ9H310 441 aa6.5□□□□□ -1.37
UBR4-212ENST00000475973 TP63Q9H3D4 680 aaPredicted RBP6.5□□□□□ -1.37
UBR4-212ENST00000475973 RNF167Q9H6Y7 350 aa6.5□□□□□ -1.37
UBR4-212ENST00000475973 NT5DC2Q9H857 520 aa6.5□□□□□ -1.37
UBR4-212ENST00000475973 NEK6Q9HC98 313 aa6.5□□□□□ -1.37
UBR4-212ENST00000475973 FGF20Q9NP95 211 aaPredicted RBP6.5□□□□□ -1.37
UBR4-212ENST00000475973 ATP13A2Q9NQ11 1180 aa6.5□□□□□ -1.37
UBR4-212ENST00000475973 DMRT3Q9NQL9 472 aa6.5□□□□□ -1.37
UBR4-212ENST00000475973 CCDC177Q9NQR7 707 aaPredicted RBP6.5□□□□□ -1.37
UBR4-212ENST00000475973 ABCB10Q9NRK6 738 aa6.5□□□□□ -1.37
UBR4-212ENST00000475973 MS4A12Q9NXJ0 267 aa6.5□□□□□ -1.37
UBR4-212ENST00000475973 TAS2R9Q9NYW1 312 aa6.5□□□□□ -1.37
UBR4-212ENST00000475973 TAS2R7Q9NYW3 318 aa6.5□□□□□ -1.37
UBR4-212ENST00000475973 SPATA7Q9P0W8 599 aa6.5□□□□□ -1.37
UBR4-212ENST00000475973 CFAP97Q9P2B7 532 aa6.5□□□□□ -1.37
UBR4-212ENST00000475973 CRNNQ9UBG3 495 aaPredicted RBP6.5□□□□□ -1.37
UBR4-212ENST00000475973 LSM7Q9UK45 103 aaKnown RBP6.5□□□□□ -1.37
UBR4-212ENST00000475973 DIMT1Q9UNQ2 313 aaKnown RBP6.5□□□□□ -1.37
UBR4-212ENST00000475973 MGAT4BQ9UQ53 548 aa6.5□□□□□ -1.37
UBR4-212ENST00000475973 TMEM98Q9Y2Y6 226 aa6.5□□□□□ -1.37
UBR4-212ENST00000475973 PCDHGA5Q9Y5G8 931 aa6.5□□□□□ -1.37
UBR4-212ENST00000475973 COL4A2P08572 1712 aa6.5□□□□□ -1.37
UBR4-212ENST00000475973 CFAP54Q96N23 3096 aa6.49□□□□□ -1.37
UBR4-212ENST00000475973 DENND4CQ5VZ89 1909 aa6.49□□□□□ -1.37
UBR4-212ENST00000475973 LOC105378220A0A1B0GUY1 285 aaPredicted RBP6.49□□□□□ -1.37
UBR4-212ENST00000475973 OTOL1A6NHN0 477 aaPredicted RBP6.49□□□□□ -1.37
UBR4-212ENST00000475973 FADS2P1A8MWK0 482 aa6.49□□□□□ -1.37
UBR4-212ENST00000475973 PSMD11O00231 422 aa6.49□□□□□ -1.37
UBR4-212ENST00000475973 HOXC11O43248 304 aaPredicted RBP6.49□□□□□ -1.37
UBR4-212ENST00000475973 ASNA1O43681 348 aa6.49□□□□□ -1.37
UBR4-212ENST00000475973 B4GALT2O60909 372 aa6.49□□□□□ -1.37
UBR4-212ENST00000475973 TRIM3O75382 744 aaPredicted RBP6.49□□□□□ -1.37
UBR4-212ENST00000475973 CCNB2O95067 398 aa6.49□□□□□ -1.37
UBR4-212ENST00000475973 C1orf105O95561 183 aa6.49□□□□□ -1.37
UBR4-212ENST00000475973 CPSF4O95639 269 aaKnown RBP6.49□□□□□ -1.37
UBR4-212ENST00000475973 KRT75O95678 551 aa6.49□□□□□ -1.37
UBR4-212ENST00000475973 CYP17A1P05093 508 aa6.49□□□□□ -1.37
UBR4-212ENST00000475973 MSL3P1P0C860 447 aa6.49□□□□□ -1.37
UBR4-212ENST00000475973 C1GALT1C1LP0DN25 315 aa6.49□□□□□ -1.37
UBR4-212ENST00000475973 DBTP11182 482 aaKnown RBP6.49□□□□□ -1.37
UBR4-212ENST00000475973 ADH5P11766 374 aa6.49□□□□□ -1.37
UBR4-212ENST00000475973 CKMT1AP12532 417 aa6.49□□□□□ -1.37
UBR4-212ENST00000475973 CPEP16870 476 aa6.49□□□□□ -1.37
UBR4-212ENST00000475973 GALP22466 123 aa6.49□□□□□ -1.37
UBR4-212ENST00000475973 UQCRC2P22695 453 aa6.49□□□□□ -1.37
UBR4-212ENST00000475973 CXCR2P25025 360 aa6.49□□□□□ -1.37
UBR4-212ENST00000475973 HLA-DMAP28067 261 aa6.49□□□□□ -1.37
UBR4-212ENST00000475973 ACADLP28330 430 aa6.49□□□□□ -1.37
UBR4-212ENST00000475973 GTF2E2P29084 291 aaKnown RBP6.49□□□□□ -1.37
UBR4-212ENST00000475973 VIPR1P32241 457 aa6.49□□□□□ -1.37
UBR4-212ENST00000475973 S100A5P33763 92 aa6.49□□□□□ -1.37
UBR4-212ENST00000475973 ARL1P40616 181 aaPredicted RBP6.49□□□□□ -1.37
UBR4-212ENST00000475973 GSTM5P46439 218 aa6.49□□□□□ -1.37
UBR4-212ENST00000475973 KCNJ5P48544 419 aa6.49□□□□□ -1.37
UBR4-212ENST00000475973 DGKEP52429 567 aa6.49□□□□□ -1.37
UBR4-212ENST00000475973 LIM2P55344 173 aa6.49□□□□□ -1.37
UBR4-212ENST00000475973 DEFA1P59665 94 aa6.49□□□□□ -1.37
UBR4-212ENST00000475973 DEFA3P59666 94 aa6.49□□□□□ -1.37
UBR4-212ENST00000475973 CDC42P60953 191 aa6.49□□□□□ -1.37
UBR4-212ENST00000475973 POLR2LP62875 67 aaKnown RBP6.49□□□□□ -1.37
UBR4-212ENST00000475973 CDK5Q00535 292 aa6.49□□□□□ -1.37
UBR4-212ENST00000475973 TNP2Q05952 138 aa6.49□□□□□ -1.37
UBR4-212ENST00000475973 HSPA14Q0VDF9 509 aa6.49□□□□□ -1.37
UBR4-212ENST00000475973 COX10Q12887 443 aa6.49□□□□□ -1.37
UBR4-212ENST00000475973 HYAL2Q12891 473 aa6.49□□□□□ -1.37
UBR4-212ENST00000475973 CDH18Q13634 790 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms