RNA–Protein interactions for RNA: ENST00000475549.1

HDAC3-207, Transcript of histone deacetylase 3, humanhuman

TSL 2

Gene HDAC3, Length 297 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-207ENST00000475549 C8orf74Q6P047 294 aa6.43□□□□□ -1.38
HDAC3-207ENST00000475549 LETMD1Q6P1Q0 360 aa6.43□□□□□ -1.38
HDAC3-207ENST00000475549 SLC29A4Q7RTT9 530 aa6.43□□□□□ -1.38
HDAC3-207ENST00000475549 NUDT13Q86X67 352 aa6.43□□□□□ -1.38
HDAC3-207ENST00000475549 CTAGE4Q8IX94 777 aa6.43□□□□□ -1.38
HDAC3-207ENST00000475549 GALNT12Q8IXK2 581 aa6.43□□□□□ -1.38
HDAC3-207ENST00000475549 ULK2Q8IYT8 1036 aa6.43□□□□□ -1.38
HDAC3-207ENST00000475549 DND1Q8IYX4 353 aaKnown RBP6.43□□□□□ -1.38
HDAC3-207ENST00000475549 PRR22Q8IZ63 422 aa6.43□□□□□ -1.38
HDAC3-207ENST00000475549 METTL4Q8N3J2 472 aa6.43□□□□□ -1.38
HDAC3-207ENST00000475549 TNIP2Q8NFZ5 429 aa6.43□□□□□ -1.38
HDAC3-207ENST00000475549 OR4F6Q8NGB9 312 aa6.43□□□□□ -1.38
HDAC3-207ENST00000475549 OR4K14Q8NGD5 310 aa6.43□□□□□ -1.38
HDAC3-207ENST00000475549 SPPL2AQ8TCT8 520 aa6.43□□□□□ -1.38
HDAC3-207ENST00000475549 ZNF483Q8TF39 744 aaPredicted RBP6.43□□□□□ -1.38
HDAC3-207ENST00000475549 DIO2Q92813 273 aa6.43□□□□□ -1.38
HDAC3-207ENST00000475549 TP53INP1Q96A56 240 aa6.43□□□□□ -1.38
HDAC3-207ENST00000475549 SARAFQ96BY9 339 aa6.43□□□□□ -1.38
HDAC3-207ENST00000475549 CTHRC1Q96CG8 243 aa6.43□□□□□ -1.38
HDAC3-207ENST00000475549 REPS1Q96D71 796 aa6.43□□□□□ -1.38
HDAC3-207ENST00000475549 JSRP1Q96MG2 331 aaPredicted RBP6.43□□□□□ -1.38
HDAC3-207ENST00000475549 ZNF681Q96N22 645 aa6.43□□□□□ -1.38
HDAC3-207ENST00000475549 RILPQ96NA2 401 aa6.43□□□□□ -1.38
HDAC3-207ENST00000475549 PAFAH2Q99487 392 aa6.43□□□□□ -1.38
HDAC3-207ENST00000475549 SERPINI1Q99574 410 aa6.43□□□□□ -1.38
HDAC3-207ENST00000475549 CENPKQ9BS16 269 aa6.43□□□□□ -1.38
HDAC3-207ENST00000475549 DOHHQ9BU89 302 aa6.43□□□□□ -1.38
HDAC3-207ENST00000475549 NXF5Q9H1B4 397 aaKnown RBP6.43□□□□□ -1.38
HDAC3-207ENST00000475549 OR10A5Q9H207 317 aa6.43□□□□□ -1.38
HDAC3-207ENST00000475549 CDC42EP4Q9H3Q1 356 aaKnown RBP6.43□□□□□ -1.38
HDAC3-207ENST00000475549 PRM3Q9NNZ6 103 aa6.43□□□□□ -1.38
HDAC3-207ENST00000475549 KCNN3Q9UGI6 736 aa6.43□□□□□ -1.38
HDAC3-207ENST00000475549 ZNF639Q9UID6 485 aa6.43□□□□□ -1.38
HDAC3-207ENST00000475549 SLC6A5Q9Y345 797 aa6.43□□□□□ -1.38
HDAC3-207ENST00000475549 PCDHA9Q9Y5H5 950 aa6.43□□□□□ -1.38
HDAC3-207ENST00000475549 NPFFR2Q9Y5X5 522 aa6.43□□□□□ -1.38
HDAC3-207ENST00000475549 IKBKGQ9Y6K9 419 aa6.43□□□□□ -1.38
HDAC3-207ENST00000475549 FAM221AA4D161 298 aa6.42□□□□□ -1.38
HDAC3-207ENST00000475549 AHRRA9YTQ3 701 aa6.42□□□□□ -1.38
HDAC3-207ENST00000475549 DYRK3O43781 588 aa6.42□□□□□ -1.38
HDAC3-207ENST00000475549 CTAG2O75638 210 aa6.42□□□□□ -1.38
HDAC3-207ENST00000475549 TRAPPC6AO75865 159 aa6.42□□□□□ -1.38
HDAC3-207ENST00000475549 SNX4O95219 450 aa6.42□□□□□ -1.38
HDAC3-207ENST00000475549 EPPINO95925 133 aa6.42□□□□□ -1.38
HDAC3-207ENST00000475549 CBX7O95931 251 aa6.42□□□□□ -1.38
HDAC3-207ENST00000475549 PDYNP01213 254 aa6.42□□□□□ -1.38
HDAC3-207ENST00000475549 ATP1B1P05026 303 aa6.42□□□□□ -1.38
HDAC3-207ENST00000475549 CHN1P15882 459 aa6.42□□□□□ -1.38
HDAC3-207ENST00000475549 BMP7P18075 431 aa6.42□□□□□ -1.38
HDAC3-207ENST00000475549 GPX3P22352 226 aa6.42□□□□□ -1.38
HDAC3-207ENST00000475549 PIK3R1P27986 724 aa6.42□□□□□ -1.38
HDAC3-207ENST00000475549 ABCD3P28288 659 aa6.42□□□□□ -1.38
HDAC3-207ENST00000475549 PTPN6P29350 595 aa6.42□□□□□ -1.38
HDAC3-207ENST00000475549 DNAJA1P31689 397 aaKnown RBP6.42□□□□□ -1.38
HDAC3-207ENST00000475549 CEACAM8P31997 349 aaPredicted RBP6.42□□□□□ -1.38
HDAC3-207ENST00000475549 HSD17B3P37058 310 aa6.42□□□□□ -1.38
HDAC3-207ENST00000475549 FEN1P39748 380 aaKnown RBP6.42□□□□□ -1.38
HDAC3-207ENST00000475549 CDK9P50750 372 aaKnown RBP6.42□□□□□ -1.38
HDAC3-207ENST00000475549 CCNG1P51959 295 aa6.42□□□□□ -1.38
HDAC3-207ENST00000475549 ZNF136P52737 540 aa6.42□□□□□ -1.38
HDAC3-207ENST00000475549 IST1P53990 364 aa6.42□□□□□ -1.38
HDAC3-207ENST00000475549 NAGLUP54802 743 aa6.42□□□□□ -1.38
HDAC3-207ENST00000475549 MAP4K2Q12851 820 aa6.42□□□□□ -1.38
HDAC3-207ENST00000475549 EXOSC7Q15024 291 aaKnown RBP6.42□□□□□ -1.38
HDAC3-207ENST00000475549 RPS6KA2Q15349 733 aa6.42□□□□□ -1.38
HDAC3-207ENST00000475549 NNATQ16517 81 aa6.42□□□□□ -1.38
HDAC3-207ENST00000475549 PRSS53Q2L4Q9 553 aa6.42□□□□□ -1.38
HDAC3-207ENST00000475549 GGTA1PQ4G0N0 100 aa6.42□□□□□ -1.38
HDAC3-207ENST00000475549 EIPR1Q53HC9 387 aa6.42□□□□□ -1.38
HDAC3-207ENST00000475549 DCST1Q5T197 706 aa6.42□□□□□ -1.38
HDAC3-207ENST00000475549 WLSQ5T9L3 541 aa6.42□□□□□ -1.38
HDAC3-207ENST00000475549 RIPPLY2Q5TAB7 128 aa6.42□□□□□ -1.38
HDAC3-207ENST00000475549 VASNQ6EMK4 673 aa6.42□□□□□ -1.38
HDAC3-207ENST00000475549 OR52E8Q6IFG1 317 aa6.42□□□□□ -1.38
HDAC3-207ENST00000475549 SLC48A1Q6P1K1 146 aa6.42□□□□□ -1.38
HDAC3-207ENST00000475549 ARSKQ6UWY0 536 aa6.42□□□□□ -1.38
HDAC3-207ENST00000475549 COMMD6Q7Z4G1 85 aa6.42□□□□□ -1.38
HDAC3-207ENST00000475549 MILR1Q7Z6M3 343 aa6.42□□□□□ -1.38
HDAC3-207ENST00000475549 TAGAPQ8N103 731 aa6.42□□□□□ -1.38
HDAC3-207ENST00000475549 MMGT1Q8N4V1 131 aa6.42□□□□□ -1.38
HDAC3-207ENST00000475549 WDSUB1Q8N9V3 476 aa6.42□□□□□ -1.38
HDAC3-207ENST00000475549 RELL2Q8NC24 303 aaPredicted RBP6.42□□□□□ -1.38
HDAC3-207ENST00000475549 C17orf47Q8NEP4 570 aa6.42□□□□□ -1.38
HDAC3-207ENST00000475549 ADCY4Q8NFM4 1077 aa6.42□□□□□ -1.38
HDAC3-207ENST00000475549 UHMK1Q8TAS1 419 aaKnown RBP6.42□□□□□ -1.38
HDAC3-207ENST00000475549 TRPC4APQ8TEL6 797 aa6.42□□□□□ -1.38
HDAC3-207ENST00000475549 IFT81Q8WYA0 676 aa6.42□□□□□ -1.38
HDAC3-207ENST00000475549 HGDQ93099 445 aa6.42□□□□□ -1.38
HDAC3-207ENST00000475549 ATP6V1E2Q96A05 226 aa6.42□□□□□ -1.38
HDAC3-207ENST00000475549 ART5Q96L15 291 aa6.42□□□□□ -1.38
HDAC3-207ENST00000475549 NODALQ96S42 347 aa6.42□□□□□ -1.38
HDAC3-207ENST00000475549 HBEGFQ99075 208 aa6.42□□□□□ -1.38
HDAC3-207ENST00000475549 SH3GL2Q99962 352 aa6.42□□□□□ -1.38
HDAC3-207ENST00000475549 MRPL57Q9BQC6 102 aaKnown RBP6.42□□□□□ -1.38
HDAC3-207ENST00000475549 ZNF559Q9BR84 538 aa6.42□□□□□ -1.38
HDAC3-207ENST00000475549 PELOQ9BRX2 385 aaKnown RBP6.42□□□□□ -1.38
HDAC3-207ENST00000475549 C1QTNF3Q9BXJ4 246 aa6.42□□□□□ -1.38
HDAC3-207ENST00000475549 PRDM14Q9GZV8 571 aa6.42□□□□□ -1.38
HDAC3-207ENST00000475549 ANKRA2Q9H9E1 313 aa6.42□□□□□ -1.38
HDAC3-207ENST00000475549 SDAD1Q9NVU7 687 aaKnown RBP eCLIP6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms