RNA–Protein interactions for RNA: ENST00000473778.5

C9orf3-214, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 2,396 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-214ENST00000473778 LINC01555Q8NAE3 123 aa10.34□□□□□ -0.75
C9orf3-214ENST00000473778 LSM14AQ8ND56 463 aaKnown RBP10.34□□□□□ -0.75
C9orf3-214ENST00000473778 OR6F1Q8NGZ6 308 aa10.34□□□□□ -0.75
C9orf3-214ENST00000473778 HCAR2Q8TDS4 363 aa10.34□□□□□ -0.75
C9orf3-214ENST00000473778 TFGQ92734 400 aaPredicted RBP10.34□□□□□ -0.75
C9orf3-214ENST00000473778 TMEM203Q969S6 136 aa10.34□□□□□ -0.75
C9orf3-214ENST00000473778 TMEM80Q96HE8 168 aa10.34□□□□□ -0.75
C9orf3-214ENST00000473778 AGAP4Q96P64 663 aa10.34□□□□□ -0.75
C9orf3-214ENST00000473778 TEFMQ96QE5 360 aaKnown RBP10.34□□□□□ -0.75
C9orf3-214ENST00000473778 POLR2J2Q9GZM3 115 aaKnown RBP10.34□□□□□ -0.75
C9orf3-214ENST00000473778 QRSL1Q9H0R6 528 aaKnown RBP10.34□□□□□ -0.75
C9orf3-214ENST00000473778 RHBGQ9H310 441 aa10.34□□□□□ -0.75
C9orf3-214ENST00000473778 RERGLQ9H628 205 aa10.34□□□□□ -0.75
C9orf3-214ENST00000473778 DYRK4Q9NR20 520 aa10.34□□□□□ -0.75
C9orf3-214ENST00000473778 MDC1Q14676 2089 aaKnown RBP10.34□□□□□ -0.75
C9orf3-214ENST00000473778 IGKV1-8A0A0C4DH67 115 aa10.34□□□□□ -0.75
C9orf3-214ENST00000473778 C17orf113A0A1B0GUU1 675 aa10.34□□□□□ -0.75
C9orf3-214ENST00000473778 GLOD5A6NK44 160 aa10.34□□□□□ -0.75
C9orf3-214ENST00000473778 ZNF670-ZNF695F2Z2N8 137 aa10.34□□□□□ -0.75
C9orf3-214ENST00000473778 SEMA3DO95025 777 aa10.34□□□□□ -0.75
C9orf3-214ENST00000473778 HTR3AP46098 478 aa10.34□□□□□ -0.75
C9orf3-214ENST00000473778 CCT3P49368 545 aaKnown RBP10.34□□□□□ -0.75
C9orf3-214ENST00000473778 DUSP2Q05923 314 aa10.34□□□□□ -0.75
C9orf3-214ENST00000473778 GPR19Q15760 415 aa10.34□□□□□ -0.75
C9orf3-214ENST00000473778 ZNF750Q32MQ0 723 aa10.34□□□□□ -0.75
C9orf3-214ENST00000473778 TIMM50Q3ZCQ8 353 aa10.34□□□□□ -0.75
C9orf3-214ENST00000473778 SYT14P1Q58G82 188 aa10.34□□□□□ -0.75
C9orf3-214ENST00000473778 ZNF793Q6ZN11 406 aa10.34□□□□□ -0.75
C9orf3-214ENST00000473778 SZRD1Q7Z422 152 aa10.34□□□□□ -0.75
C9orf3-214ENST00000473778 OR8H2Q8N162 312 aa10.34□□□□□ -0.75
C9orf3-214ENST00000473778 OR6T1Q8NGN1 323 aa10.34□□□□□ -0.75
C9orf3-214ENST00000473778 SETD7Q8WTS6 366 aaKnown RBP10.34□□□□□ -0.75
C9orf3-214ENST00000473778 TM9SF4Q92544 642 aa10.34□□□□□ -0.75
C9orf3-214ENST00000473778 TRIM43Q96BQ3 446 aaPredicted RBP10.34□□□□□ -0.75
C9orf3-214ENST00000473778 YIPF4Q9BSR8 244 aa10.34□□□□□ -0.75
C9orf3-214ENST00000473778 SEC14L3Q9UDX4 400 aa10.34□□□□□ -0.75
C9orf3-214ENST00000473778 ENOPH1Q9UHY7 261 aa10.34□□□□□ -0.75
C9orf3-214ENST00000473778 TMCC3Q9ULS5 477 aa10.34□□□□□ -0.75
C9orf3-214ENST00000473778 MGAT4BQ9UQ53 548 aa10.34□□□□□ -0.75
C9orf3-214ENST00000473778 SPTBN5Q9NRC6 3674 aaKnown RBP10.34□□□□□ -0.75
C9orf3-214ENST00000473778 DENND4AQ7Z401 1863 aa10.33□□□□□ -0.76
C9orf3-214ENST00000473778 LINC00854A0A1B0GVQ3 168 aa10.33□□□□□ -0.76
C9orf3-214ENST00000473778 HYKKA2RU49 373 aa10.33□□□□□ -0.76
C9orf3-214ENST00000473778 A8MV72 311 aaPredicted RBP10.33□□□□□ -0.76
C9orf3-214ENST00000473778 FAAHO00519 579 aa10.33□□□□□ -0.76
C9orf3-214ENST00000473778 SLC28A2O43868 658 aa10.33□□□□□ -0.76
C9orf3-214ENST00000473778 LZTS3O60299 673 aaPredicted RBP10.33□□□□□ -0.76
C9orf3-214ENST00000473778 SLITRK5O94991 958 aa10.33□□□□□ -0.76
C9orf3-214ENST00000473778 CCL5P13501 91 aa10.33□□□□□ -0.76
C9orf3-214ENST00000473778 EPCAMP16422 314 aa10.33□□□□□ -0.76
C9orf3-214ENST00000473778 ITGB7P26010 798 aa10.33□□□□□ -0.76
C9orf3-214ENST00000473778 CD79BP40259 229 aa10.33□□□□□ -0.76
C9orf3-214ENST00000473778 COPZ1P61923 177 aa10.33□□□□□ -0.76
C9orf3-214ENST00000473778 PSPHP78330 225 aa10.33□□□□□ -0.76
C9orf3-214ENST00000473778 EFNB1P98172 346 aa10.33□□□□□ -0.76
C9orf3-214ENST00000473778 CHRNEQ04844 493 aa10.33□□□□□ -0.76
C9orf3-214ENST00000473778 DPTQ07507 201 aa10.33□□□□□ -0.76
C9orf3-214ENST00000473778 GPR50Q13585 617 aa10.33□□□□□ -0.76
C9orf3-214ENST00000473778 NCF4Q15080 339 aa10.33□□□□□ -0.76
C9orf3-214ENST00000473778 OR2G6Q5TZ20 316 aa10.33□□□□□ -0.76
C9orf3-214ENST00000473778 C17orf64Q86WR6 236 aa10.33□□□□□ -0.76
C9orf3-214ENST00000473778 KIF18BQ86Y91 864 aa10.33□□□□□ -0.76
C9orf3-214ENST00000473778 TBC1D19Q8N5T2 526 aa10.33□□□□□ -0.76
C9orf3-214ENST00000473778 SYT14Q8NB59 555 aa10.33□□□□□ -0.76
C9orf3-214ENST00000473778 OR52I1Q8NGK6 324 aa10.33□□□□□ -0.76
C9orf3-214ENST00000473778 OR8J1Q8NGP2 316 aa10.33□□□□□ -0.76
C9orf3-214ENST00000473778 CHAC2Q8WUX2 184 aa10.33□□□□□ -0.76
C9orf3-214ENST00000473778 XAGE5Q8WWM1 108 aa10.33□□□□□ -0.76
C9orf3-214ENST00000473778 RAD51AP1Q96B01 352 aa10.33□□□□□ -0.76
C9orf3-214ENST00000473778 ZCCHC2Q9C0B9 1178 aaKnown RBP10.33□□□□□ -0.76
C9orf3-214ENST00000473778 MIXL1Q9H2W2 232 aa10.33□□□□□ -0.76
C9orf3-214ENST00000473778 OR51I1Q9H343 314 aa10.33□□□□□ -0.76
C9orf3-214ENST00000473778 GLIPR2Q9H4G4 154 aa10.33□□□□□ -0.76
C9orf3-214ENST00000473778 SYNPO2LQ9H987 977 aa10.33□□□□□ -0.76
C9orf3-214ENST00000473778 ANKRA2Q9H9E1 313 aa10.33□□□□□ -0.76
C9orf3-214ENST00000473778 C3orf14Q9HBI5 128 aa10.33□□□□□ -0.76
C9orf3-214ENST00000473778 NEK6Q9HC98 313 aa10.33□□□□□ -0.76
C9orf3-214ENST00000473778 NEUROD4Q9HD90 331 aa10.33□□□□□ -0.76
C9orf3-214ENST00000473778 TIGARQ9NQ88 270 aa10.33□□□□□ -0.76
C9orf3-214ENST00000473778 TESQ9UGI8 421 aaKnown RBP10.33□□□□□ -0.76
C9orf3-214ENST00000473778 MOSPD1Q9UJG1 213 aa10.33□□□□□ -0.76
C9orf3-214ENST00000473778 GPR34Q9UPC5 381 aa10.33□□□□□ -0.76
C9orf3-214ENST00000473778 TRAPPC4Q9Y296 219 aa10.33□□□□□ -0.76
C9orf3-214ENST00000473778 FAM172BPA6NC97 362 aa10.33□□□□□ -0.76
C9orf3-214ENST00000473778 LATO43561 262 aa10.33□□□□□ -0.76
C9orf3-214ENST00000473778 ICMTO60725 284 aa10.33□□□□□ -0.76
C9orf3-214ENST00000473778 CCNKO75909 580 aa10.33□□□□□ -0.76
C9orf3-214ENST00000473778 CHRM4P08173 479 aa10.33□□□□□ -0.76
C9orf3-214ENST00000473778 ADH5P11766 374 aa10.33□□□□□ -0.76
C9orf3-214ENST00000473778 PSMA1P25786 263 aaKnown RBP10.33□□□□□ -0.76
C9orf3-214ENST00000473778 SSTR4P31391 388 aa10.33□□□□□ -0.76
C9orf3-214ENST00000473778 VIPR2P41587 438 aa10.33□□□□□ -0.76
C9orf3-214ENST00000473778 MAN2A2P49641 1150 aa10.33□□□□□ -0.76
C9orf3-214ENST00000473778 OR2B6P58173 313 aa10.33□□□□□ -0.76
C9orf3-214ENST00000473778 HEPACAMQ14CZ8 416 aa10.33□□□□□ -0.76
C9orf3-214ENST00000473778 GAB4Q2WGN9 574 aa10.33□□□□□ -0.76
C9orf3-214ENST00000473778 SPDYE7PQ495Y7 208 aa10.33□□□□□ -0.76
C9orf3-214ENST00000473778 CASP12Q6UXS9 341 aa10.33□□□□□ -0.76
C9orf3-214ENST00000473778 CACUL1Q86Y37 369 aa10.33□□□□□ -0.76
C9orf3-214ENST00000473778 GRAMD2AQ8IUY3 354 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms