RNA–Protein interactions for RNA: ENST00000473036.2

TPM3-216, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 746 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-216ENST00000473036 DRD2P14416 443 aa12.16□□□□□ -0.46
TPM3-216ENST00000473036 PORP16435 677 aaPredicted RBP12.16□□□□□ -0.46
TPM3-216ENST00000473036 DDCP20711 480 aa12.16□□□□□ -0.46
TPM3-216ENST00000473036 GNLYP22749 145 aa12.16□□□□□ -0.46
TPM3-216ENST00000473036 GALNSP34059 522 aa12.16□□□□□ -0.46
TPM3-216ENST00000473036 SLC37A1P57057 533 aa12.16□□□□□ -0.46
TPM3-216ENST00000473036 RNF4P78317 190 aa12.16□□□□□ -0.46
TPM3-216ENST00000473036 PLIN5Q00G26 463 aa12.16□□□□□ -0.46
TPM3-216ENST00000473036 SRSF11Q05519 484 aaKnown RBP12.16□□□□□ -0.46
TPM3-216ENST00000473036 FUT7Q11130 342 aa12.16□□□□□ -0.46
TPM3-216ENST00000473036 BIKQ13323 160 aa12.16□□□□□ -0.46
TPM3-216ENST00000473036 MEP1AQ16819 746 aa12.16□□□□□ -0.46
TPM3-216ENST00000473036 ABHD17BQ5VST6 288 aa12.16□□□□□ -0.46
TPM3-216ENST00000473036 IRAK1BP1Q5VVH5 260 aa12.16□□□□□ -0.46
TPM3-216ENST00000473036 SPINK14Q6IE38 97 aa12.16□□□□□ -0.46
TPM3-216ENST00000473036 CCDC116Q8IYX3 515 aa12.16□□□□□ -0.46
TPM3-216ENST00000473036 ZADH2Q8N4Q0 377 aa12.16□□□□□ -0.46
TPM3-216ENST00000473036 MDS2Q8NDY4 140 aa12.16□□□□□ -0.46
TPM3-216ENST00000473036 CDC26Q8NHZ8 85 aa12.16□□□□□ -0.46
TPM3-216ENST00000473036 EXOSC8Q96B26 276 aaKnown RBP12.16□□□□□ -0.46
TPM3-216ENST00000473036 CTHRC1Q96CG8 243 aa12.16□□□□□ -0.46
TPM3-216ENST00000473036 KLHL29Q96CT2 875 aa12.16□□□□□ -0.46
TPM3-216ENST00000473036 ZNF354BQ96LW1 612 aa12.16□□□□□ -0.46
TPM3-216ENST00000473036 TSSK3Q96PN8 268 aa12.16□□□□□ -0.46
TPM3-216ENST00000473036 C1orf50Q9BV19 199 aa12.16□□□□□ -0.46
TPM3-216ENST00000473036 DEFB126Q9BYW3 111 aa12.16□□□□□ -0.46
TPM3-216ENST00000473036 RNF32Q9H0A6 362 aa12.16□□□□□ -0.46
TPM3-216ENST00000473036 AKTIPQ9H8T0 292 aa12.16□□□□□ -0.46
TPM3-216ENST00000473036 MAT2BQ9NZL9 334 aa12.16□□□□□ -0.46
TPM3-216ENST00000473036 ZNF639Q9UID6 485 aa12.16□□□□□ -0.46
TPM3-216ENST00000473036 G3BP2Q9UN86 482 aaKnown RBP12.16□□□□□ -0.46
TPM3-216ENST00000473036 DTX4Q9Y2E6 619 aa12.16□□□□□ -0.46
TPM3-216ENST00000473036 SVILO95425 2214 aa12.15□□□□□ -0.46
TPM3-216ENST00000473036 OR5H15A6NDH6 313 aa12.15□□□□□ -0.46
TPM3-216ENST00000473036 GABRR3A8MPY1 467 aa12.15□□□□□ -0.46
TPM3-216ENST00000473036 MYO1GB0I1T2 1018 aa12.15□□□□□ -0.46
TPM3-216ENST00000473036 WWP2O00308 870 aa12.15□□□□□ -0.46
TPM3-216ENST00000473036 HDAC3O15379 428 aa12.15□□□□□ -0.46
TPM3-216ENST00000473036 OR10H2O60403 315 aa12.15□□□□□ -0.46
TPM3-216ENST00000473036 KLHL41O60662 606 aa12.15□□□□□ -0.46
TPM3-216ENST00000473036 SHOX2O60902 331 aaPredicted RBP12.15□□□□□ -0.46
TPM3-216ENST00000473036 GUCY1B2O75343 617 aa12.15□□□□□ -0.46
TPM3-216ENST00000473036 ITGA10O75578 1167 aa12.15□□□□□ -0.46
TPM3-216ENST00000473036 WISP2O76076 250 aa12.15□□□□□ -0.46
TPM3-216ENST00000473036 ZFAND5O76080 213 aa12.15□□□□□ -0.46
TPM3-216ENST00000473036 LRATO95237 230 aa12.15□□□□□ -0.46
TPM3-216ENST00000473036 NADKO95544 446 aaPredicted RBP12.15□□□□□ -0.46
TPM3-216ENST00000473036 CBX7O95931 251 aa12.15□□□□□ -0.46
TPM3-216ENST00000473036 ATP1B1P05026 303 aa12.15□□□□□ -0.46
TPM3-216ENST00000473036 UQCRFS1P47985 274 aa12.15□□□□□ -0.46
TPM3-216ENST00000473036 AP2B1P63010 937 aa12.15□□□□□ -0.46
TPM3-216ENST00000473036 IRX1P78414 480 aaPredicted RBP12.15□□□□□ -0.46
TPM3-216ENST00000473036 ARG2P78540 354 aa12.15□□□□□ -0.46
TPM3-216ENST00000473036 MRPS35P82673 323 aaKnown RBP12.15□□□□□ -0.46
TPM3-216ENST00000473036 PTGR1Q14914 329 aa12.15□□□□□ -0.46
TPM3-216ENST00000473036 TRMT12Q53H54 448 aaKnown RBP12.15□□□□□ -0.46
TPM3-216ENST00000473036 ZNF628Q5EBL2 1059 aa12.15□□□□□ -0.46
TPM3-216ENST00000473036 LYPD8Q6UX82 237 aa12.15□□□□□ -0.46
TPM3-216ENST00000473036 HSDL2Q6YN16 418 aa12.15□□□□□ -0.46
TPM3-216ENST00000473036 MAMDC2Q7Z304 686 aaPredicted RBP12.15□□□□□ -0.46
TPM3-216ENST00000473036 TICAM1Q8IUC6 712 aa12.15□□□□□ -0.46
TPM3-216ENST00000473036 LRRC34Q8IZ02 419 aa12.15□□□□□ -0.46
TPM3-216ENST00000473036 LGI4Q8N135 537 aa12.15□□□□□ -0.46
TPM3-216ENST00000473036 SLC5A8Q8N695 610 aa12.15□□□□□ -0.46
TPM3-216ENST00000473036 ZNF441Q8N8Z8 693 aa12.15□□□□□ -0.46
TPM3-216ENST00000473036 STON2Q8WXE9 905 aa12.15□□□□□ -0.46
TPM3-216ENST00000473036 TAAR6Q96RI8 345 aa12.15□□□□□ -0.46
TPM3-216ENST00000473036 CNPPD1Q9BV87 410 aa12.15□□□□□ -0.46
TPM3-216ENST00000473036 FAIM2Q9BWQ8 316 aa12.15□□□□□ -0.46
TPM3-216ENST00000473036 NUF2Q9BZD4 464 aa12.15□□□□□ -0.46
TPM3-216ENST00000473036 EPS8L2Q9H6S3 715 aa12.15□□□□□ -0.46
TPM3-216ENST00000473036 SLC35C2Q9NQQ7 365 aa12.15□□□□□ -0.46
TPM3-216ENST00000473036 EHD3Q9NZN3 535 aa12.15□□□□□ -0.46
TPM3-216ENST00000473036 MYOTQ9UBF9 498 aa12.15□□□□□ -0.46
TPM3-216ENST00000473036 MARCOQ9UEW3 520 aaPredicted RBP12.15□□□□□ -0.46
TPM3-216ENST00000473036 EXPH5Q8NEV8 1989 aa12.15□□□□□ -0.46
TPM3-216ENST00000473036 SYNDIG1LA6NDD5 238 aa12.14□□□□□ -0.47
TPM3-216ENST00000473036 WIPF3A6NGB9 483 aa12.14□□□□□ -0.47
TPM3-216ENST00000473036 SDHDO14521 159 aa12.14□□□□□ -0.47
TPM3-216ENST00000473036 AKAP10O43572 662 aa12.14□□□□□ -0.47
TPM3-216ENST00000473036 OR2J2O76002 312 aa12.14□□□□□ -0.47
TPM3-216ENST00000473036 OR6B1O95007 311 aa12.14□□□□□ -0.47
TPM3-216ENST00000473036 CSNK2A2P19784 350 aaPredicted RBP12.14□□□□□ -0.47
TPM3-216ENST00000473036 NT5EP21589 574 aa12.14□□□□□ -0.47
TPM3-216ENST00000473036 TRHRP34981 398 aaPredicted RBP12.14□□□□□ -0.47
TPM3-216ENST00000473036 MAP4K2Q12851 820 aa12.14□□□□□ -0.47
TPM3-216ENST00000473036 PDE7AQ13946 482 aa12.14□□□□□ -0.47
TPM3-216ENST00000473036 ZNF169Q14929 603 aaPredicted RBP12.14□□□□□ -0.47
TPM3-216ENST00000473036 HEPACAMQ14CZ8 416 aa12.14□□□□□ -0.47
TPM3-216ENST00000473036 EXOSC7Q15024 291 aaKnown RBP12.14□□□□□ -0.47
TPM3-216ENST00000473036 EBPQ15125 230 aaKnown RBP12.14□□□□□ -0.47
TPM3-216ENST00000473036 OR1C1Q15619 314 aa12.14□□□□□ -0.47
TPM3-216ENST00000473036 IL23RQ5VWK5 629 aa12.14□□□□□ -0.47
TPM3-216ENST00000473036 GALNT12Q8IXK2 581 aa12.14□□□□□ -0.47
TPM3-216ENST00000473036 LRRC25Q8N386 305 aaPredicted RBP12.14□□□□□ -0.47
TPM3-216ENST00000473036 LIX1Q8N485 282 aa12.14□□□□□ -0.47
TPM3-216ENST00000473036 CISD2Q8N5K1 135 aaKnown RBP12.14□□□□□ -0.47
TPM3-216ENST00000473036 KRTCAP2Q8N6L1 136 aa12.14□□□□□ -0.47
TPM3-216ENST00000473036 OR9A2Q8NGT5 310 aa12.14□□□□□ -0.47
TPM3-216ENST00000473036 OR8K3Q8NH51 312 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms