RNA–Protein interactions for RNA: ENST00000472880.1

COL9A3-210, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 3

Gene COL9A3, Length 959 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-210ENST00000472880 NTMT1Q9BV86 223 aa18.13■□□□□ 0.49
COL9A3-210ENST00000472880 MRPL1Q9BYD6 325 aaKnown RBP18.13■□□□□ 0.49
COL9A3-210ENST00000472880 OR10A5Q9H207 317 aa18.13■□□□□ 0.49
COL9A3-210ENST00000472880 ELOVL6Q9H5J4 265 aa18.13■□□□□ 0.49
COL9A3-210ENST00000472880 ADAM29Q9UKF5 820 aa18.13■□□□□ 0.49
COL9A3-210ENST00000472880 L3MBTL1Q9Y468 752 aa18.13■□□□□ 0.49
COL9A3-210ENST00000472880 NPFFR2Q9Y5X5 522 aa18.13■□□□□ 0.49
COL9A3-210ENST00000472880 HSPB2A8KAH6 182 aa18.12■□□□□ 0.49
COL9A3-210ENST00000472880 ACSL3O95573 720 aa18.12■□□□□ 0.49
COL9A3-210ENST00000472880 CT62P0C5K7 136 aa18.12■□□□□ 0.49
COL9A3-210ENST00000472880 KRT15P19012 456 aa18.12■□□□□ 0.49
COL9A3-210ENST00000472880 MAGEA12P43365 314 aa18.12■□□□□ 0.49
COL9A3-210ENST00000472880 SERPINB9P50453 376 aa18.12■□□□□ 0.49
COL9A3-210ENST00000472880 XKP51811 444 aa18.12■□□□□ 0.49
COL9A3-210ENST00000472880 MAPK12P53778 367 aa18.12■□□□□ 0.49
COL9A3-210ENST00000472880 DUSP8Q13202 625 aa18.12■□□□□ 0.49
COL9A3-210ENST00000472880 HSPB2Q16082 182 aa18.12■□□□□ 0.49
COL9A3-210ENST00000472880 GGTA1PQ4G0N0 100 aa18.12■□□□□ 0.49
COL9A3-210ENST00000472880 UBAP2Q5T6F2 1119 aaKnown RBP18.12■□□□□ 0.49
COL9A3-210ENST00000472880 SPPL2AQ8TCT8 520 aa18.12■□□□□ 0.49
COL9A3-210ENST00000472880 ISL2Q96A47 359 aa18.12■□□□□ 0.49
COL9A3-210ENST00000472880 RILPQ96NA2 401 aa18.12■□□□□ 0.49
COL9A3-210ENST00000472880 NSUN5Q96P11 429 aaKnown RBP18.12■□□□□ 0.49
COL9A3-210ENST00000472880 SECISBP2Q96T21 854 aaKnown RBP18.12■□□□□ 0.49
COL9A3-210ENST00000472880 PAFAH2Q99487 392 aa18.12■□□□□ 0.49
COL9A3-210ENST00000472880 GOLGA6L10A6NI86 522 aa18.11■□□□□ 0.49
COL9A3-210ENST00000472880 GUCY1B2O75343 617 aa18.11■□□□□ 0.49
COL9A3-210ENST00000472880 TRAPPC6AO75865 159 aa18.11■□□□□ 0.49
COL9A3-210ENST00000472880 SNX4O95219 450 aa18.11■□□□□ 0.49
COL9A3-210ENST00000472880 CPMP14384 443 aa18.11■□□□□ 0.49
COL9A3-210ENST00000472880 CD1EP15812 388 aa18.11■□□□□ 0.49
COL9A3-210ENST00000472880 DLX5P56178 289 aa18.11■□□□□ 0.49
COL9A3-210ENST00000472880 SGO1Q5FBB7 561 aa18.11■□□□□ 0.49
COL9A3-210ENST00000472880 BICRALQ6AI39 1079 aa18.11■□□□□ 0.49
COL9A3-210ENST00000472880 ARSKQ6UWY0 536 aa18.11■□□□□ 0.49
COL9A3-210ENST00000472880 MILR1Q7Z6M3 343 aa18.11■□□□□ 0.49
COL9A3-210ENST00000472880 PACS2Q86VP3 889 aa18.11■□□□□ 0.49
COL9A3-210ENST00000472880 RELL1Q8IUW5 271 aa18.11■□□□□ 0.49
COL9A3-210ENST00000472880 MMGT1Q8N4V1 131 aa18.11■□□□□ 0.49
COL9A3-210ENST00000472880 ZNF615Q8N8J6 731 aa18.11■□□□□ 0.49
COL9A3-210ENST00000472880 OR7G1Q8NGA0 311 aa18.11■□□□□ 0.49
COL9A3-210ENST00000472880 OR4F6Q8NGB9 312 aa18.11■□□□□ 0.49
COL9A3-210ENST00000472880 CDC42EP4Q9H3Q1 356 aaKnown RBP18.11■□□□□ 0.49
COL9A3-210ENST00000472880 ZBTB26Q9HCK0 441 aa18.11■□□□□ 0.49
COL9A3-210ENST00000472880 SLC12A4Q9UP95 1085 aa18.11■□□□□ 0.49
COL9A3-210ENST00000472880 ARHGAP21Q5T5U3 1957 aa18.11■□□□□ 0.49
COL9A3-210ENST00000472880 DVL2O14641 736 aa18.1■□□□□ 0.49
COL9A3-210ENST00000472880 KRT38O76015 456 aa18.1■□□□□ 0.49
COL9A3-210ENST00000472880 PORP16435 677 aaPredicted RBP18.1■□□□□ 0.49
COL9A3-210ENST00000472880 DEKP35659 375 aaKnown RBP18.1■□□□□ 0.49
COL9A3-210ENST00000472880 CDK9P50750 372 aaKnown RBP18.1■□□□□ 0.49
COL9A3-210ENST00000472880 ART1P52961 327 aa18.1■□□□□ 0.49
COL9A3-210ENST00000472880 CRYZQ08257 329 aaKnown RBP18.1■□□□□ 0.49
COL9A3-210ENST00000472880 TOMM20Q15388 145 aa18.1■□□□□ 0.49
COL9A3-210ENST00000472880 ACSF3Q4G176 576 aaPredicted RBP18.1■□□□□ 0.49
COL9A3-210ENST00000472880 COMMD6Q7Z4G1 85 aa18.1■□□□□ 0.49
COL9A3-210ENST00000472880 ZZZ3Q8IYH5 903 aa18.1■□□□□ 0.49
COL9A3-210ENST00000472880 PM20D2Q8IYS1 436 aa18.1■□□□□ 0.49
COL9A3-210ENST00000472880 PRR22Q8IZ63 422 aa18.1■□□□□ 0.49
COL9A3-210ENST00000472880 VWA5B2Q8N398 1253 aa18.1■□□□□ 0.49
COL9A3-210ENST00000472880 METTL4Q8N3J2 472 aa18.1■□□□□ 0.49
COL9A3-210ENST00000472880 MNS1Q8NEH6 495 aa18.1■□□□□ 0.49
COL9A3-210ENST00000472880 C17orf47Q8NEP4 570 aa18.1■□□□□ 0.49
COL9A3-210ENST00000472880 ADIPOR1Q96A54 375 aa18.1■□□□□ 0.49
COL9A3-210ENST00000472880 LRRC46Q96FV0 321 aa18.1■□□□□ 0.49
COL9A3-210ENST00000472880 ANGPTL4Q9BY76 406 aa18.1■□□□□ 0.49
COL9A3-210ENST00000472880 FUT8Q9BYC5 575 aa18.1■□□□□ 0.49
COL9A3-210ENST00000472880 BRINP2Q9C0B6 783 aa18.1■□□□□ 0.49
COL9A3-210ENST00000472880 TSPYL1Q9H0U9 437 aa18.1■□□□□ 0.49
COL9A3-210ENST00000472880 CFL2Q9Y281 166 aa18.1■□□□□ 0.49
COL9A3-210ENST00000472880 C15orf41Q9Y2V0 281 aa18.1■□□□□ 0.49
COL9A3-210ENST00000472880 HIVEP1P15822 2718 aa18.09■□□□□ 0.49
COL9A3-210ENST00000472880 C1orf226A1L170 272 aa18.09■□□□□ 0.49
COL9A3-210ENST00000472880 AHRRA9YTQ3 701 aa18.09■□□□□ 0.49
COL9A3-210ENST00000472880 OTCP00480 354 aa18.09■□□□□ 0.49
COL9A3-210ENST00000472880 HPNP05981 417 aa18.09■□□□□ 0.49
COL9A3-210ENST00000472880 RPS17P08708 135 aaKnown RBP18.09■□□□□ 0.49
COL9A3-210ENST00000472880 COL6A2P12110 1019 aa18.09■□□□□ 0.49
COL9A3-210ENST00000472880 BMP5P22003 454 aa18.09■□□□□ 0.49
COL9A3-210ENST00000472880 GPX3P22352 226 aa18.09■□□□□ 0.49
COL9A3-210ENST00000472880 ABCD3P28288 659 aa18.09■□□□□ 0.49
COL9A3-210ENST00000472880 UQCRC1P31930 480 aa18.09■□□□□ 0.49
COL9A3-210ENST00000472880 PEX19P40855 299 aa18.09■□□□□ 0.49
COL9A3-210ENST00000472880 SLC48A1Q6P1K1 146 aa18.09■□□□□ 0.49
COL9A3-210ENST00000472880 SEM1Q6ZVN7 128 aa18.09■□□□□ 0.49
COL9A3-210ENST00000472880 LACC1Q8IV20 430 aa18.09■□□□□ 0.49
COL9A3-210ENST00000472880 NOA1Q8NC60 698 aaKnown RBP18.09■□□□□ 0.49
COL9A3-210ENST00000472880 KIF18AQ8NI77 898 aa18.09■□□□□ 0.49
COL9A3-210ENST00000472880 TRPC4APQ8TEL6 797 aa18.09■□□□□ 0.49
COL9A3-210ENST00000472880 TIMP4Q99727 224 aa18.09■□□□□ 0.49
COL9A3-210ENST00000472880 MRPL57Q9BQC6 102 aaKnown RBP18.09■□□□□ 0.49
COL9A3-210ENST00000472880 MRPL46Q9H2W6 279 aaKnown RBP18.09■□□□□ 0.49
COL9A3-210ENST00000472880 DNAJB12Q9NXW2 375 aaKnown RBP18.09■□□□□ 0.49
COL9A3-210ENST00000472880 PCDHA9Q9Y5H5 950 aa18.09■□□□□ 0.49
COL9A3-210ENST00000472880 EXPH5Q8NEV8 1989 aa18.08■□□□□ 0.49
COL9A3-210ENST00000472880 POC1B-GALNT4F8VUJ3 575 aa18.08■□□□□ 0.48
COL9A3-210ENST00000472880 CDH16O75309 829 aa18.08■□□□□ 0.48
COL9A3-210ENST00000472880 ERAL1O75616 437 aaKnown RBP18.08■□□□□ 0.48
COL9A3-210ENST00000472880 EPPINO95925 133 aa18.08■□□□□ 0.48
COL9A3-210ENST00000472880 CTAGE8P0CG41 777 aa18.08■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms