RNA–Protein interactions for RNA: ENST00000472679.1

CLK1-209, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 461 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-209ENST00000472679 DDI2Q5TDH0 399 aa4.27□□□□□ -1.73
CLK1-209ENST00000472679 VITQ6UXI7 678 aa4.27□□□□□ -1.73
CLK1-209ENST00000472679 SLC22A18ASQ8N1D0 253 aa4.27□□□□□ -1.73
CLK1-209ENST00000472679 MSANTD4Q8NCY6 345 aa4.27□□□□□ -1.73
CLK1-209ENST00000472679 ZNF671Q8TAW3 534 aa4.27□□□□□ -1.73
CLK1-209ENST00000472679 RDH11Q8TC12 318 aa4.27□□□□□ -1.73
CLK1-209ENST00000472679 BIRC7Q96CA5 298 aa4.27□□□□□ -1.73
CLK1-209ENST00000472679 CARD9Q9H257 536 aa4.27□□□□□ -1.73
CLK1-209ENST00000472679 PRMT8Q9NR22 394 aaPredicted RBP4.27□□□□□ -1.73
CLK1-209ENST00000472679 ABCC13Q9NSE7 274 aa4.27□□□□□ -1.73
CLK1-209ENST00000472679 CUTCQ9NTM9 273 aa4.27□□□□□ -1.73
CLK1-209ENST00000472679 FAM120CQ9NX05 1096 aaKnown RBP4.27□□□□□ -1.73
CLK1-209ENST00000472679 TUBGCP4Q9UGJ1 667 aa4.27□□□□□ -1.73
CLK1-209ENST00000472679 TRMT6Q9UJA5 497 aaKnown RBP4.27□□□□□ -1.73
CLK1-209ENST00000472679 POGZQ7Z3K3 1410 aa4.27□□□□□ -1.73
CLK1-209ENST00000472679 A0A0A6YYD4 124 aa4.26□□□□□ -1.73
CLK1-209ENST00000472679 SAP18O00422 153 aaKnown RBP4.26□□□□□ -1.73
CLK1-209ENST00000472679 CHEK1O14757 476 aa4.26□□□□□ -1.73
CLK1-209ENST00000472679 ABHD2P08910 425 aa4.26□□□□□ -1.73
CLK1-209ENST00000472679 MAT2AP31153 395 aaKnown RBP4.26□□□□□ -1.73
CLK1-209ENST00000472679 NLRP11P59045 1033 aaKnown RBP4.26□□□□□ -1.73
CLK1-209ENST00000472679 CLPPQ16740 277 aaPredicted RBP4.26□□□□□ -1.73
CLK1-209ENST00000472679 HAGHQ16775 308 aa4.26□□□□□ -1.73
CLK1-209ENST00000472679 HKDC1Q2TB90 917 aa4.26□□□□□ -1.73
CLK1-209ENST00000472679 ACER2Q5QJU3 275 aa4.26□□□□□ -1.73
CLK1-209ENST00000472679 ATAD3CQ5T2N8 411 aa4.26□□□□□ -1.73
CLK1-209ENST00000472679 LINC00242Q5T6M2 205 aa4.26□□□□□ -1.73
CLK1-209ENST00000472679 ZNF600Q6ZNG1 722 aa4.26□□□□□ -1.73
CLK1-209ENST00000472679 MOB2Q70IA6 237 aa4.26□□□□□ -1.73
CLK1-209ENST00000472679 ASRGL1Q7L266 308 aa4.26□□□□□ -1.73
CLK1-209ENST00000472679 BNIPLQ7Z465 357 aa4.26□□□□□ -1.73
CLK1-209ENST00000472679 SERINC5Q86VE9 423 aa4.26□□□□□ -1.73
CLK1-209ENST00000472679 KLHL30-AS1Q8NEE0 82 aa4.26□□□□□ -1.73
CLK1-209ENST00000472679 RBM18Q96H35 190 aaKnown RBP4.26□□□□□ -1.73
CLK1-209ENST00000472679 ACCSQ96QU6 501 aa4.26□□□□□ -1.73
CLK1-209ENST00000472679 TRPV6Q9H1D0 765 aa4.26□□□□□ -1.73
CLK1-209ENST00000472679 AMBNQ9NP70 447 aa4.26□□□□□ -1.73
CLK1-209ENST00000472679 NRN1Q9NPD7 142 aa4.26□□□□□ -1.73
CLK1-209ENST00000472679 HMG20BQ9P0W2 317 aa4.26□□□□□ -1.73
CLK1-209ENST00000472679 ERVK-18Q9QC07 812 aa4.26□□□□□ -1.73
CLK1-209ENST00000472679 COPS7AQ9UBW8 275 aa4.26□□□□□ -1.73
CLK1-209ENST00000472679 APPL1Q9UKG1 709 aa4.26□□□□□ -1.73
CLK1-209ENST00000472679 TDRKHQ9Y2W6 561 aaKnown RBP4.26□□□□□ -1.73
CLK1-209ENST00000472679 NAALAD2Q9Y3Q0 740 aa4.26□□□□□ -1.73
CLK1-209ENST00000472679 ADAMTS9Q9P2N4 1935 aa4.25□□□□□ -1.73
CLK1-209ENST00000472679 A0A0U1RQG5 324 aaPredicted RBP4.25□□□□□ -1.73
CLK1-209ENST00000472679 HNRNPFP52597 415 aaKnown RBP4.25□□□□□ -1.73
CLK1-209ENST00000472679 MFAP2P55001 183 aa4.25□□□□□ -1.73
CLK1-209ENST00000472679 TRA2BP62995 288 aaKnown RBP4.25□□□□□ -1.73
CLK1-209ENST00000472679 ARF5P84085 180 aa4.25□□□□□ -1.73
CLK1-209ENST00000472679 CCZ1BP86790 482 aa4.25□□□□□ -1.73
CLK1-209ENST00000472679 CCZ1P86791 482 aaPredicted RBP4.25□□□□□ -1.73
CLK1-209ENST00000472679 NAAAQ02083 359 aa4.25□□□□□ -1.73
CLK1-209ENST00000472679 PPP2R5CQ13362 524 aa4.25□□□□□ -1.73
CLK1-209ENST00000472679 RUNX3Q13761 415 aa4.25□□□□□ -1.73
CLK1-209ENST00000472679 CNPY1Q3B7I2 92 aa4.25□□□□□ -1.73
CLK1-209ENST00000472679 TIMM50Q3ZCQ8 353 aa4.25□□□□□ -1.73
CLK1-209ENST00000472679 CMPK2Q5EBM0 449 aa4.25□□□□□ -1.73
CLK1-209ENST00000472679 SEL1L2Q5TEA6 688 aa4.25□□□□□ -1.73
CLK1-209ENST00000472679 HIST2H2AA3Q6FI13 130 aa4.25□□□□□ -1.73
CLK1-209ENST00000472679 APOOLQ6UXV4 268 aa4.25□□□□□ -1.73
CLK1-209ENST00000472679 ADAMTSL5Q6ZMM2 481 aa4.25□□□□□ -1.73
CLK1-209ENST00000472679 PRSS48Q7RTY5 328 aa4.25□□□□□ -1.73
CLK1-209ENST00000472679 ADCK1Q86TW2 530 aa4.25□□□□□ -1.73
CLK1-209ENST00000472679 LUZP1Q86V48 1076 aa4.25□□□□□ -1.73
CLK1-209ENST00000472679 CD177Q8N6Q3 437 aa4.25□□□□□ -1.73
CLK1-209ENST00000472679 TBCKQ8TEA7 893 aa4.25□□□□□ -1.73
CLK1-209ENST00000472679 PTPRUQ92729 1446 aa4.25□□□□□ -1.73
CLK1-209ENST00000472679 ACAT2Q9BWD1 397 aa4.25□□□□□ -1.73
CLK1-209ENST00000472679 FAM153AQ9UHL3 310 aa4.25□□□□□ -1.73
CLK1-209ENST00000472679 EMCNQ9ULC0 261 aa4.25□□□□□ -1.73
CLK1-209ENST00000472679 TP53TG3Q9ULZ0 132 aa4.25□□□□□ -1.73
CLK1-209ENST00000472679 ZNF318Q5VUA4 2279 aa4.24□□□□□ -1.73
CLK1-209ENST00000472679 HIST1H2AGP0C0S8 130 aaPredicted RBP4.24□□□□□ -1.73
CLK1-209ENST00000472679 ZNF18P17022 549 aa4.24□□□□□ -1.73
CLK1-209ENST00000472679 MARCKSP29966 332 aaPredicted RBP4.24□□□□□ -1.73
CLK1-209ENST00000472679 CCL11P51671 97 aa4.24□□□□□ -1.73
CLK1-209ENST00000472679 YBEYP58557 167 aaPredicted RBP4.24□□□□□ -1.73
CLK1-209ENST00000472679 SRP54P61011 504 aaKnown RBP4.24□□□□□ -1.73
CLK1-209ENST00000472679 PPP1R8Q12972 351 aaKnown RBP4.24□□□□□ -1.73
CLK1-209ENST00000472679 TSTA3Q13630 321 aaPredicted RBP4.24□□□□□ -1.73
CLK1-209ENST00000472679 DLEU7Q6UYE1 221 aa4.24□□□□□ -1.73
CLK1-209ENST00000472679 RAPH1Q70E73 1250 aa4.24□□□□□ -1.73
CLK1-209ENST00000472679 HIST2H2ABQ8IUE6 130 aaPredicted RBP4.24□□□□□ -1.73
CLK1-209ENST00000472679 HSCBQ8IWL3 235 aa4.24□□□□□ -1.73
CLK1-209ENST00000472679 PEX5LQ8IYB4 626 aa4.24□□□□□ -1.73
CLK1-209ENST00000472679 GPD1LQ8N335 351 aa4.24□□□□□ -1.73
CLK1-209ENST00000472679 CRYGNQ8WXF5 182 aa4.24□□□□□ -1.73
CLK1-209ENST00000472679 HIST1H2ACQ93077 130 aa4.24□□□□□ -1.73
CLK1-209ENST00000472679 ZBED6CLQ96FA7 236 aaPredicted RBP4.24□□□□□ -1.73
CLK1-209ENST00000472679 ATP6V0BQ99437 205 aa4.24□□□□□ -1.73
CLK1-209ENST00000472679 NAP1L3Q99457 506 aaPredicted RBP4.24□□□□□ -1.73
CLK1-209ENST00000472679 GPR174Q9BXC1 333 aa4.24□□□□□ -1.73
CLK1-209ENST00000472679 ZSCAN5CA6NGD5 496 aaPredicted RBP4.23□□□□□ -1.73
CLK1-209ENST00000472679 CCT8L1PA6NM43 557 aa4.23□□□□□ -1.73
CLK1-209ENST00000472679 DDX39AO00148 427 aaKnown RBP4.23□□□□□ -1.73
CLK1-209ENST00000472679 NME2P1O60361 137 aa4.23□□□□□ -1.73
CLK1-209ENST00000472679 RHBDL1O75783 438 aa4.23□□□□□ -1.73
CLK1-209ENST00000472679 SYNGR4O95473 234 aa4.23□□□□□ -1.73
CLK1-209ENST00000472679 GOT2P00505 430 aaKnown RBP4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms