RNA–Protein interactions for RNA: ENST00000471455.1

CPSF4-211, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 5

Gene CPSF4, Length 569 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-211ENST00000471455 EEF1A1P68104 462 aaKnown RBP8.36□□□□□ -1.07
CPSF4-211ENST00000471455 CRYZQ08257 329 aaKnown RBP8.36□□□□□ -1.07
CPSF4-211ENST00000471455 SLAMF1Q13291 335 aa8.36□□□□□ -1.07
CPSF4-211ENST00000471455 SNTB1Q13884 538 aaKnown RBP8.36□□□□□ -1.07
CPSF4-211ENST00000471455 EBPQ15125 230 aaKnown RBP8.36□□□□□ -1.07
CPSF4-211ENST00000471455 C18orf21Q32NC0 220 aaPredicted RBP8.36□□□□□ -1.07
CPSF4-211ENST00000471455 HP1BP3Q5SSJ5 553 aaPredicted RBP8.36□□□□□ -1.07
CPSF4-211ENST00000471455 EEF1A1P5Q5VTE0 462 aa8.36□□□□□ -1.07
CPSF4-211ENST00000471455 KHDRBS2Q5VWX1 349 aaKnown RBP8.36□□□□□ -1.07
CPSF4-211ENST00000471455 CLEC9AQ6UXN8 241 aa8.36□□□□□ -1.07
CPSF4-211ENST00000471455 ZNF793Q6ZN11 406 aa8.36□□□□□ -1.07
CPSF4-211ENST00000471455 SEM1Q6ZVN7 128 aa8.36□□□□□ -1.07
CPSF4-211ENST00000471455 GPR180Q86V85 440 aa8.36□□□□□ -1.07
CPSF4-211ENST00000471455 ZCCHC7Q8N3Z6 543 aaKnown RBP8.36□□□□□ -1.07
CPSF4-211ENST00000471455 TNIP2Q8NFZ5 429 aa8.36□□□□□ -1.07
CPSF4-211ENST00000471455 ANKRD49Q8WVL7 239 aa8.36□□□□□ -1.07
CPSF4-211ENST00000471455 RIT1Q92963 219 aa8.36□□□□□ -1.07
CPSF4-211ENST00000471455 ISL2Q96A47 359 aa8.36□□□□□ -1.07
CPSF4-211ENST00000471455 TP53INP1Q96A56 240 aa8.36□□□□□ -1.07
CPSF4-211ENST00000471455 RGMAQ96B86 450 aa8.36□□□□□ -1.07
CPSF4-211ENST00000471455 REPS1Q96D71 796 aa8.36□□□□□ -1.07
CPSF4-211ENST00000471455 CAPZA3Q96KX2 299 aa8.36□□□□□ -1.07
CPSF4-211ENST00000471455 ZFP3Q96NJ6 502 aa8.36□□□□□ -1.07
CPSF4-211ENST00000471455 DACH2Q96NX9 599 aa8.36□□□□□ -1.07
CPSF4-211ENST00000471455 ERVK-6Q9BXR3 956 aa8.36□□□□□ -1.07
CPSF4-211ENST00000471455 CALHM2Q9HA72 323 aa8.36□□□□□ -1.07
CPSF4-211ENST00000471455 LYARQ9NX58 379 aaKnown RBP8.36□□□□□ -1.07
CPSF4-211ENST00000471455 NUDT4Q9NZJ9 180 aa8.36□□□□□ -1.07
CPSF4-211ENST00000471455 CNOT11Q9UKZ1 510 aaKnown RBP8.36□□□□□ -1.07
CPSF4-211ENST00000471455 RNF112Q9ULX5 631 aa8.36□□□□□ -1.07
CPSF4-211ENST00000471455 CAMK2AQ9UQM7 478 aa8.36□□□□□ -1.07
CPSF4-211ENST00000471455 ERVK-19Q9WJR5 959 aa8.36□□□□□ -1.07
CPSF4-211ENST00000471455 PSAT1Q9Y617 370 aa8.36□□□□□ -1.07
CPSF4-211ENST00000471455 JMJD1CQ15652 2540 aa8.36□□□□□ -1.07
CPSF4-211ENST00000471455 EML6Q6ZMW3 1958 aa8.35□□□□□ -1.07
CPSF4-211ENST00000471455 C2orf92A0A1B0GVN3 265 aa8.35□□□□□ -1.07
CPSF4-211ENST00000471455 MBD3L4A6NDZ8 208 aaPredicted RBP8.35□□□□□ -1.07
CPSF4-211ENST00000471455 MBD3L3A6NE82 208 aaPredicted RBP8.35□□□□□ -1.07
CPSF4-211ENST00000471455 MBD3L5A6NJ08 208 aaPredicted RBP8.35□□□□□ -1.07
CPSF4-211ENST00000471455 RTCAO00442 366 aaKnown RBP8.35□□□□□ -1.07
CPSF4-211ENST00000471455 CASKO14936 926 aa8.35□□□□□ -1.07
CPSF4-211ENST00000471455 TAPBPO15533 448 aa8.35□□□□□ -1.07
CPSF4-211ENST00000471455 TRIM3O75382 744 aaPredicted RBP8.35□□□□□ -1.07
CPSF4-211ENST00000471455 ACTL6AO96019 429 aa8.35□□□□□ -1.07
CPSF4-211ENST00000471455 HPNP05981 417 aa8.35□□□□□ -1.07
CPSF4-211ENST00000471455 HEXAP06865 529 aa8.35□□□□□ -1.07
CPSF4-211ENST00000471455 CCDC166P0CW27 439 aa8.35□□□□□ -1.07
CPSF4-211ENST00000471455 NR2F6P10588 404 aa8.35□□□□□ -1.07
CPSF4-211ENST00000471455 CYP4B1P13584 511 aa8.35□□□□□ -1.07
CPSF4-211ENST00000471455 STMN1P16949 149 aa8.35□□□□□ -1.07
CPSF4-211ENST00000471455 PIK3CBP42338 1070 aa8.35□□□□□ -1.07
CPSF4-211ENST00000471455 CPA2P48052 419 aa8.35□□□□□ -1.07
CPSF4-211ENST00000471455 ZNF136P52737 540 aa8.35□□□□□ -1.07
CPSF4-211ENST00000471455 ZNF267Q14586 743 aaPredicted RBP8.35□□□□□ -1.07
CPSF4-211ENST00000471455 TOMM20Q15388 145 aa8.35□□□□□ -1.07
CPSF4-211ENST00000471455 NHSL2Q5HYW2 709 aa8.35□□□□□ -1.07
CPSF4-211ENST00000471455 OR4C11Q6IEV9 310 aa8.35□□□□□ -1.07
CPSF4-211ENST00000471455 ADNP2Q6IQ32 1131 aa8.35□□□□□ -1.07
CPSF4-211ENST00000471455 UBE3DQ7Z6J8 389 aa8.35□□□□□ -1.07
CPSF4-211ENST00000471455 LRRC8AQ8IWT6 810 aa8.35□□□□□ -1.07
CPSF4-211ENST00000471455 OR4N5Q8IXE1 308 aa8.35□□□□□ -1.07
CPSF4-211ENST00000471455 LAS2Q8IYD9 372 aa8.35□□□□□ -1.07
CPSF4-211ENST00000471455 NAXEQ8NCW5 288 aa8.35□□□□□ -1.07
CPSF4-211ENST00000471455 WFDC11Q8NEX6 87 aa8.35□□□□□ -1.07
CPSF4-211ENST00000471455 MBD3L2Q8NHZ7 208 aaPredicted RBP8.35□□□□□ -1.07
CPSF4-211ENST00000471455 SMPDL3BQ92485 455 aa8.35□□□□□ -1.07
CPSF4-211ENST00000471455 RILPQ96NA2 401 aa8.35□□□□□ -1.07
CPSF4-211ENST00000471455 TRIB1Q96RU8 372 aa8.35□□□□□ -1.07
CPSF4-211ENST00000471455 TIMP4Q99727 224 aa8.35□□□□□ -1.07
CPSF4-211ENST00000471455 SFXN3Q9BWM7 321 aa8.35□□□□□ -1.07
CPSF4-211ENST00000471455 CD244Q9BZW8 370 aa8.35□□□□□ -1.07
CPSF4-211ENST00000471455 DDX47Q9H0S4 455 aaKnown RBP8.35□□□□□ -1.07
CPSF4-211ENST00000471455 PLAC1Q9HBJ0 212 aa8.35□□□□□ -1.07
CPSF4-211ENST00000471455 MOCS1Q9NZB8 636 aa8.35□□□□□ -1.07
CPSF4-211ENST00000471455 OPTCQ9UBM4 332 aa8.35□□□□□ -1.07
CPSF4-211ENST00000471455 PTBP2Q9UKA9 531 aaKnown RBP8.35□□□□□ -1.07
CPSF4-211ENST00000471455 EIF3LQ9Y262 564 aaKnown RBP8.35□□□□□ -1.07
CPSF4-211ENST00000471455 C15orf41Q9Y2V0 281 aa8.35□□□□□ -1.07
CPSF4-211ENST00000471455 MPDZO75970 2070 aa8.34□□□□□ -1.07
CPSF4-211ENST00000471455 A0A1B0GTL3 188 aa8.34□□□□□ -1.07
CPSF4-211ENST00000471455 K7EPI3 171 aa8.34□□□□□ -1.07
CPSF4-211ENST00000471455 DEAF1O75398 565 aaPredicted RBP8.34□□□□□ -1.07
CPSF4-211ENST00000471455 GPR75O95800 540 aa8.34□□□□□ -1.07
CPSF4-211ENST00000471455 TGFB1P01137 390 aa8.34□□□□□ -1.07
CPSF4-211ENST00000471455 TMIGD3P0DMS9 266 aaPredicted RBP8.34□□□□□ -1.07
CPSF4-211ENST00000471455 CD1DP15813 335 aa8.34□□□□□ -1.07
CPSF4-211ENST00000471455 TCP1P17987 556 aaKnown RBP8.34□□□□□ -1.07
CPSF4-211ENST00000471455 CD22P20273 847 aa8.34□□□□□ -1.07
CPSF4-211ENST00000471455 HOXC12P31275 282 aa8.34□□□□□ -1.07
CPSF4-211ENST00000471455 SERPINB4P48594 390 aa8.34□□□□□ -1.07
CPSF4-211ENST00000471455 DIO3P55073 304 aa8.34□□□□□ -1.07
CPSF4-211ENST00000471455 SLC37A1P57057 533 aa8.34□□□□□ -1.07
CPSF4-211ENST00000471455 NKX6-1P78426 367 aaPredicted RBP8.34□□□□□ -1.07
CPSF4-211ENST00000471455 DR1Q01658 176 aa8.34□□□□□ -1.07
CPSF4-211ENST00000471455 PCDH1Q08174 1060 aa8.34□□□□□ -1.07
CPSF4-211ENST00000471455 PDIA2Q13087 525 aaKnown RBP8.34□□□□□ -1.07
CPSF4-211ENST00000471455 DDX39BQ13838 428 aaKnown RBP8.34□□□□□ -1.07
CPSF4-211ENST00000471455 E2F2Q14209 437 aa8.34□□□□□ -1.07
CPSF4-211ENST00000471455 SETDB1Q15047 1291 aa8.34□□□□□ -1.07
CPSF4-211ENST00000471455 DEPDC1Q5TB30 811 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms