RNA–Protein interactions for RNA: ENST00000469511.1

PTPN4-209, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 476 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-209ENST00000469511 RCBTB2O95199 551 aa4.78□□□□□ -1.64
PTPN4-209ENST00000469511 IL18BPO95998 194 aa4.78□□□□□ -1.64
PTPN4-209ENST00000469511 IGHV4-39P01824 125 aa4.78□□□□□ -1.64
PTPN4-209ENST00000469511 SOD3P08294 240 aa4.78□□□□□ -1.64
PTPN4-209ENST00000469511 MPC1LP0DKB6 136 aa4.78□□□□□ -1.64
PTPN4-209ENST00000469511 PTNP21246 168 aa4.78□□□□□ -1.64
PTPN4-209ENST00000469511 HRH2P25021 359 aa4.78□□□□□ -1.64
PTPN4-209ENST00000469511 MGAT1P26572 445 aa4.78□□□□□ -1.64
PTPN4-209ENST00000469511 SSTR4P31391 388 aa4.78□□□□□ -1.64
PTPN4-209ENST00000469511 HNRNPH1P31943 449 aaKnown RBP4.78□□□□□ -1.64
PTPN4-209ENST00000469511 CTNNA1P35221 906 aaKnown RBP4.78□□□□□ -1.64
PTPN4-209ENST00000469511 PTPN7P35236 360 aa4.78□□□□□ -1.64
PTPN4-209ENST00000469511 PPARGP37231 505 aaPredicted RBP4.78□□□□□ -1.64
PTPN4-209ENST00000469511 RPL21P46778 160 aaKnown RBP4.78□□□□□ -1.64
PTPN4-209ENST00000469511 CDK9P50750 372 aaKnown RBP4.78□□□□□ -1.64
PTPN4-209ENST00000469511 TERF1P54274 439 aa4.78□□□□□ -1.64
PTPN4-209ENST00000469511 RAB38P57729 211 aa4.78□□□□□ -1.64
PTPN4-209ENST00000469511 CTBP1Q13363 440 aa4.78□□□□□ -1.64
PTPN4-209ENST00000469511 TERF2Q15554 542 aa4.78□□□□□ -1.64
PTPN4-209ENST00000469511 ELAVL1Q15717 326 aaKnown RBP4.78□□□□□ -1.64
PTPN4-209ENST00000469511 C21orf62-AS1Q17RA5 79 aa4.78□□□□□ -1.64
PTPN4-209ENST00000469511 P3H1Q32P28 736 aa4.78□□□□□ -1.64
PTPN4-209ENST00000469511 AARS2Q5JTZ9 985 aaKnown RBP4.78□□□□□ -1.64
PTPN4-209ENST00000469511 UGT3A1Q6NUS8 523 aa4.78□□□□□ -1.64
PTPN4-209ENST00000469511 OPN5Q6U736 354 aa4.78□□□□□ -1.64
PTPN4-209ENST00000469511 SBSNQ6UWP8 590 aa4.78□□□□□ -1.64
PTPN4-209ENST00000469511 DNM1P46Q6ZS02 220 aa4.78□□□□□ -1.64
PTPN4-209ENST00000469511 CLEC17AQ6ZS10 378 aa4.78□□□□□ -1.64
PTPN4-209ENST00000469511 ADGRE4PQ86SQ3 457 aa4.78□□□□□ -1.64
PTPN4-209ENST00000469511 ATG4DQ86TL0 474 aaPredicted RBP4.78□□□□□ -1.64
PTPN4-209ENST00000469511 LINC00523Q86TU6 105 aa4.78□□□□□ -1.64
PTPN4-209ENST00000469511 LRRC6Q86X45 466 aa4.78□□□□□ -1.64
PTPN4-209ENST00000469511 OR4N5Q8IXE1 308 aa4.78□□□□□ -1.64
PTPN4-209ENST00000469511 MPP5Q8N3R9 675 aa4.78□□□□□ -1.64
PTPN4-209ENST00000469511 ZNF441Q8N8Z8 693 aa4.78□□□□□ -1.64
PTPN4-209ENST00000469511 PPHLN1Q8NEY8 458 aaKnown RBP4.78□□□□□ -1.64
PTPN4-209ENST00000469511 CD200R1Q8TD46 325 aa4.78□□□□□ -1.64
PTPN4-209ENST00000469511 EEF1AKMT1Q8WVE0 214 aa4.78□□□□□ -1.64
PTPN4-209ENST00000469511 TMEM171Q8WVE6 324 aa4.78□□□□□ -1.64
PTPN4-209ENST00000469511 ATL1Q8WXF7 558 aa4.78□□□□□ -1.64
PTPN4-209ENST00000469511 ROBO4Q8WZ75 1007 aa4.78□□□□□ -1.64
PTPN4-209ENST00000469511 PPWD1Q96BP3 646 aaKnown RBP4.78□□□□□ -1.64
PTPN4-209ENST00000469511 STARD4Q96DR4 205 aa4.78□□□□□ -1.64
PTPN4-209ENST00000469511 SPACA9Q96E40 222 aaPredicted RBP4.78□□□□□ -1.64
PTPN4-209ENST00000469511 SNF8Q96H20 258 aa4.78□□□□□ -1.64
PTPN4-209ENST00000469511 TSNARE1Q96NA8 513 aa4.78□□□□□ -1.64
PTPN4-209ENST00000469511 RUNDC3BQ96NL0 473 aa4.78□□□□□ -1.64
PTPN4-209ENST00000469511 SECISBP2Q96T21 854 aaKnown RBP4.78□□□□□ -1.64
PTPN4-209ENST00000469511 BPIFA3Q9BQP9 254 aa4.78□□□□□ -1.64
PTPN4-209ENST00000469511 ALOXE3Q9BYJ1 711 aa4.78□□□□□ -1.64
PTPN4-209ENST00000469511 SLCO5A1Q9H2Y9 848 aa4.78□□□□□ -1.64
PTPN4-209ENST00000469511 CALHM2Q9HA72 323 aa4.78□□□□□ -1.64
PTPN4-209ENST00000469511 ADAP2Q9NPF8 381 aa4.78□□□□□ -1.64
PTPN4-209ENST00000469511 FAM114A2Q9NRY5 505 aa4.78□□□□□ -1.64
PTPN4-209ENST00000469511 SYBUQ9NX95 663 aa4.78□□□□□ -1.64
PTPN4-209ENST00000469511 IFNKQ9P0W0 207 aa4.78□□□□□ -1.64
PTPN4-209ENST00000469511 HEY2Q9UBP5 337 aa4.78□□□□□ -1.64
PTPN4-209ENST00000469511 NDRG3Q9UGV2 375 aa4.78□□□□□ -1.64
PTPN4-209ENST00000469511 ZFP69BQ9UJL9 534 aa4.78□□□□□ -1.64
PTPN4-209ENST00000469511 AMFRQ9UKV5 643 aa4.78□□□□□ -1.64
PTPN4-209ENST00000469511 INTUQ9ULD6 942 aa4.78□□□□□ -1.64
PTPN4-209ENST00000469511 PACSIN2Q9UNF0 486 aaPredicted RBP4.78□□□□□ -1.64
PTPN4-209ENST00000469511 TRAF6Q9Y4K3 522 aa4.78□□□□□ -1.64
PTPN4-209ENST00000469511 IGHV4-30-2A0A087WSY4 118 aa4.77□□□□□ -1.65
PTPN4-209ENST00000469511 A0A1W2PNV4 684 aa4.77□□□□□ -1.65
PTPN4-209ENST00000469511 C7orf72A4D263 438 aa4.77□□□□□ -1.65
PTPN4-209ENST00000469511 C17orf51A8MQB3 221 aa4.77□□□□□ -1.65
PTPN4-209ENST00000469511 B4DXG7 233 aa4.77□□□□□ -1.65
PTPN4-209ENST00000469511 E5RI56 91 aa4.77□□□□□ -1.65
PTPN4-209ENST00000469511 OVOL3O00110 214 aa4.77□□□□□ -1.65
PTPN4-209ENST00000469511 CTNSO60931 367 aa4.77□□□□□ -1.65
PTPN4-209ENST00000469511 AVILO75366 819 aa4.77□□□□□ -1.65
PTPN4-209ENST00000469511 PRKRAO75569 313 aaKnown RBP4.77□□□□□ -1.65
PTPN4-209ENST00000469511 IFNB1P01574 187 aa4.77□□□□□ -1.65
PTPN4-209ENST00000469511 CLPSP04118 112 aa4.77□□□□□ -1.65
PTPN4-209ENST00000469511 HPNP05981 417 aa4.77□□□□□ -1.65
PTPN4-209ENST00000469511 TNNI3P19429 210 aa4.77□□□□□ -1.65
PTPN4-209ENST00000469511 SAT1P21673 171 aa4.77□□□□□ -1.65
PTPN4-209ENST00000469511 CERS1P27544 350 aa4.77□□□□□ -1.65
PTPN4-209ENST00000469511 CFPP27918 469 aa4.77□□□□□ -1.65
PTPN4-209ENST00000469511 GRK3P35626 688 aa4.77□□□□□ -1.65
PTPN4-209ENST00000469511 MAGEA1P43355 309 aa4.77□□□□□ -1.65
PTPN4-209ENST00000469511 CCR8P51685 355 aa4.77□□□□□ -1.65
PTPN4-209ENST00000469511 PLA2G16P53816 162 aa4.77□□□□□ -1.65
PTPN4-209ENST00000469511 HADHBP55084 474 aaKnown RBP4.77□□□□□ -1.65
PTPN4-209ENST00000469511 LIM2P55344 173 aa4.77□□□□□ -1.65
PTPN4-209ENST00000469511 HSD17B7P56937 341 aa4.77□□□□□ -1.65
PTPN4-209ENST00000469511 CORO7P57737 925 aa4.77□□□□□ -1.65
PTPN4-209ENST00000469511 FBXW4P57775 412 aa4.77□□□□□ -1.65
PTPN4-209ENST00000469511 REEP5Q00765 189 aa4.77□□□□□ -1.65
PTPN4-209ENST00000469511 CHRNEQ04844 493 aa4.77□□□□□ -1.65
PTPN4-209ENST00000469511 RGS1Q08116 209 aa4.77□□□□□ -1.65
PTPN4-209ENST00000469511 KLF1Q13351 362 aaPredicted RBP4.77□□□□□ -1.65
PTPN4-209ENST00000469511 RBBP5Q15291 538 aaKnown RBP4.77□□□□□ -1.65
PTPN4-209ENST00000469511 TOMM20Q15388 145 aa4.77□□□□□ -1.65
PTPN4-209ENST00000469511 MPEG1Q2M385 716 aa4.77□□□□□ -1.65
PTPN4-209ENST00000469511 C18orf21Q32NC0 220 aaPredicted RBP4.77□□□□□ -1.65
PTPN4-209ENST00000469511 C6orf52Q5T4I8 152 aa4.77□□□□□ -1.65
PTPN4-209ENST00000469511 C11orf63Q6NUN7 778 aa4.77□□□□□ -1.65
PTPN4-209ENST00000469511 ZNF704Q6ZNC4 412 aaPredicted RBP4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 111.2 ms