RNA–Protein interactions for RNA: ENST00000468143.1

CDHR3-205, Transcript of cadherin related family member 3, humanhuman

TSL 4

Gene CDHR3, Length 575 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-205ENST00000468143 ROPN1BQ9BZX4 212 aaPredicted RBP10.65□□□□□ -0.7
CDHR3-205ENST00000468143 ANKRA2Q9H9E1 313 aa10.65□□□□□ -0.7
CDHR3-205ENST00000468143 ROPN1Q9HAT0 212 aaPredicted RBP10.65□□□□□ -0.7
CDHR3-205ENST00000468143 TUBA8Q9NY65 449 aaPredicted RBP10.65□□□□□ -0.7
CDHR3-205ENST00000468143 MAT2BQ9NZL9 334 aa10.65□□□□□ -0.7
CDHR3-205ENST00000468143 LGALS13Q9UHV8 139 aa10.65□□□□□ -0.7
CDHR3-205ENST00000468143 PSME2Q9UL46 239 aa10.65□□□□□ -0.7
CDHR3-205ENST00000468143 DTX4Q9Y2E6 619 aa10.65□□□□□ -0.7
CDHR3-205ENST00000468143 POLR3HQ9Y535 204 aaPredicted RBP10.65□□□□□ -0.7
CDHR3-205ENST00000468143 CNTRLQ7Z7A1 2325 aa10.65□□□□□ -0.7
CDHR3-205ENST00000468143 ATP6AP2A0A1C7CYW4 349 aa10.64□□□□□ -0.71
CDHR3-205ENST00000468143 SERTM1A2A2V5 107 aa10.64□□□□□ -0.71
CDHR3-205ENST00000468143 NME6O75414 186 aaPredicted RBP10.64□□□□□ -0.71
CDHR3-205ENST00000468143 ATP6AP2O75787 350 aa10.64□□□□□ -0.71
CDHR3-205ENST00000468143 UROSP10746 265 aa10.64□□□□□ -0.71
CDHR3-205ENST00000468143 DRD2P14416 443 aa10.64□□□□□ -0.71
CDHR3-205ENST00000468143 PCSK2P16519 638 aa10.64□□□□□ -0.71
CDHR3-205ENST00000468143 SOX18P35713 384 aa10.64□□□□□ -0.71
CDHR3-205ENST00000468143 FBXW4P57775 412 aa10.64□□□□□ -0.71
CDHR3-205ENST00000468143 MRPS35P82673 323 aaKnown RBP10.64□□□□□ -0.71
CDHR3-205ENST00000468143 C2orf80Q0P641 193 aa10.64□□□□□ -0.71
CDHR3-205ENST00000468143 MAP4K2Q12851 820 aa10.64□□□□□ -0.71
CDHR3-205ENST00000468143 DUSP8Q13202 625 aa10.64□□□□□ -0.71
CDHR3-205ENST00000468143 NNATQ16517 81 aa10.64□□□□□ -0.71
CDHR3-205ENST00000468143 PRSS53Q2L4Q9 553 aa10.64□□□□□ -0.71
CDHR3-205ENST00000468143 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.64□□□□□ -0.71
CDHR3-205ENST00000468143 ZNF787Q6DD87 383 aa10.64□□□□□ -0.71
CDHR3-205ENST00000468143 Q6ZPB1 254 aaPredicted RBP10.64□□□□□ -0.71
CDHR3-205ENST00000468143 DOLPP1Q86YN1 238 aa10.64□□□□□ -0.71
CDHR3-205ENST00000468143 TAGAPQ8N103 731 aa10.64□□□□□ -0.71
CDHR3-205ENST00000468143 LRRC25Q8N386 305 aaPredicted RBP10.64□□□□□ -0.71
CDHR3-205ENST00000468143 VWA5B2Q8N398 1253 aa10.64□□□□□ -0.71
CDHR3-205ENST00000468143 ZNF441Q8N8Z8 693 aa10.64□□□□□ -0.71
CDHR3-205ENST00000468143 OR10G3Q8NGC4 313 aa10.64□□□□□ -0.71
CDHR3-205ENST00000468143 OR52R1Q8NGF1 315 aa10.64□□□□□ -0.71
CDHR3-205ENST00000468143 TCP10LQ8TDR4 215 aa10.64□□□□□ -0.71
CDHR3-205ENST00000468143 ADIPOR1Q96A54 375 aa10.64□□□□□ -0.71
CDHR3-205ENST00000468143 SPACA9Q96E40 222 aaPredicted RBP10.64□□□□□ -0.71
CDHR3-205ENST00000468143 C11orf24Q96F05 449 aaPredicted RBP10.64□□□□□ -0.71
CDHR3-205ENST00000468143 JSRP1Q96MG2 331 aaPredicted RBP10.64□□□□□ -0.71
CDHR3-205ENST00000468143 PHF12Q96QT6 1004 aa10.64□□□□□ -0.71
CDHR3-205ENST00000468143 SMC6Q96SB8 1091 aa10.64□□□□□ -0.71
CDHR3-205ENST00000468143 RRAGDQ9NQL2 400 aaPredicted RBP10.64□□□□□ -0.71
CDHR3-205ENST00000468143 SUCOQ9UBS9 1254 aaKnown RBP10.64□□□□□ -0.71
CDHR3-205ENST00000468143 MID2Q9UJV3 735 aa10.64□□□□□ -0.71
CDHR3-205ENST00000468143 HRH3Q9Y5N1 445 aa10.64□□□□□ -0.71
CDHR3-205ENST00000468143 MAST4O15021 2626 aa10.63□□□□□ -0.71
CDHR3-205ENST00000468143 H3BQF6 201 aa10.63□□□□□ -0.71
CDHR3-205ENST00000468143 ACOT7O00154 380 aa10.63□□□□□ -0.71
CDHR3-205ENST00000468143 AZIN1O14977 448 aa10.63□□□□□ -0.71
CDHR3-205ENST00000468143 SEC22BO75396 215 aa10.63□□□□□ -0.71
CDHR3-205ENST00000468143 ATP1B1P05026 303 aa10.63□□□□□ -0.71
CDHR3-205ENST00000468143 TPOP07202 933 aa10.63□□□□□ -0.71
CDHR3-205ENST00000468143 CHRNGP07510 517 aa10.63□□□□□ -0.71
CDHR3-205ENST00000468143 CELA3AP09093 270 aa10.63□□□□□ -0.71
CDHR3-205ENST00000468143 FBXO45P0C2W1 286 aa10.63□□□□□ -0.71
CDHR3-205ENST00000468143 LINC00032P0C843 101 aa10.63□□□□□ -0.71
CDHR3-205ENST00000468143 GPX3P22352 226 aa10.63□□□□□ -0.71
CDHR3-205ENST00000468143 PTGS2P35354 604 aa10.63□□□□□ -0.71
CDHR3-205ENST00000468143 MAGEA5P43359 124 aa10.63□□□□□ -0.71
CDHR3-205ENST00000468143 NAA20P61599 178 aa10.63□□□□□ -0.71
CDHR3-205ENST00000468143 KCNJ2P63252 427 aa10.63□□□□□ -0.71
CDHR3-205ENST00000468143 ADORA2A-AS1P86434 159 aa10.63□□□□□ -0.71
CDHR3-205ENST00000468143 FOXO1Q12778 655 aa10.63□□□□□ -0.71
CDHR3-205ENST00000468143 HEPACAMQ14CZ8 416 aa10.63□□□□□ -0.71
CDHR3-205ENST00000468143 DESI1Q6ICB0 168 aa10.63□□□□□ -0.71
CDHR3-205ENST00000468143 GALNT18Q6P9A2 607 aa10.63□□□□□ -0.71
CDHR3-205ENST00000468143 GK5Q6ZS86 529 aa10.63□□□□□ -0.71
CDHR3-205ENST00000468143 ZCCHC23Q6ZST2 131 aa10.63□□□□□ -0.71
CDHR3-205ENST00000468143 TRIM46Q7Z4K8 759 aa10.63□□□□□ -0.71
CDHR3-205ENST00000468143 MRGPRGQ86SM5 289 aa10.63□□□□□ -0.71
CDHR3-205ENST00000468143 TMEM251Q8N6I4 163 aa10.63□□□□□ -0.71
CDHR3-205ENST00000468143 OR7G1Q8NGA0 311 aa10.63□□□□□ -0.71
CDHR3-205ENST00000468143 OR9A2Q8NGT5 310 aa10.63□□□□□ -0.71
CDHR3-205ENST00000468143 AGR3Q8TD06 166 aa10.63□□□□□ -0.71
CDHR3-205ENST00000468143 PAQR8Q8TEZ7 354 aa10.63□□□□□ -0.71
CDHR3-205ENST00000468143 ITLN2Q8WWU7 325 aaPredicted RBP10.63□□□□□ -0.71
CDHR3-205ENST00000468143 KAT2AQ92830 837 aa10.63□□□□□ -0.71
CDHR3-205ENST00000468143 TP53INP1Q96A56 240 aa10.63□□□□□ -0.71
CDHR3-205ENST00000468143 NXF5Q9H1B4 397 aaKnown RBP10.63□□□□□ -0.71
CDHR3-205ENST00000468143 IL1RL2Q9HB29 575 aa10.63□□□□□ -0.71
CDHR3-205ENST00000468143 PROK2Q9HC23 129 aa10.63□□□□□ -0.71
CDHR3-205ENST00000468143 SH2D2AQ9NP31 389 aa10.63□□□□□ -0.71
CDHR3-205ENST00000468143 SIRT5Q9NXA8 310 aa10.63□□□□□ -0.71
CDHR3-205ENST00000468143 MKS1Q9NXB0 559 aa10.63□□□□□ -0.71
CDHR3-205ENST00000468143 ZNF639Q9UID6 485 aa10.63□□□□□ -0.71
CDHR3-205ENST00000468143 CNOT11Q9UKZ1 510 aaKnown RBP10.63□□□□□ -0.71
CDHR3-205ENST00000468143 MEMO1Q9Y316 297 aa10.63□□□□□ -0.71
CDHR3-205ENST00000468143 CCL27Q9Y4X3 112 aa10.63□□□□□ -0.71
CDHR3-205ENST00000468143 NPFFR2Q9Y5X5 522 aa10.63□□□□□ -0.71
CDHR3-205ENST00000468143 LIPGQ9Y5X9 500 aa10.63□□□□□ -0.71
CDHR3-205ENST00000468143 CHCHD2Q9Y6H1 151 aaPredicted RBP10.63□□□□□ -0.71
CDHR3-205ENST00000468143 SEC23IPQ9Y6Y8 1000 aaKnown RBP10.63□□□□□ -0.71
CDHR3-205ENST00000468143 HECTD1Q9ULT8 2610 aa10.63□□□□□ -0.71
CDHR3-205ENST00000468143 DOPEY2Q9Y3R5 2298 aa10.63□□□□□ -0.71
CDHR3-205ENST00000468143 FLNCQ14315 2725 aa10.63□□□□□ -0.71
CDHR3-205ENST00000468143 TMEM233B4DJY2 109 aa10.62□□□□□ -0.71
CDHR3-205ENST00000468143 NPIPA2E9PIF3 369 aa10.62□□□□□ -0.71
CDHR3-205ENST00000468143 NPIPA3F8WFD2 350 aa10.62□□□□□ -0.71
CDHR3-205ENST00000468143 SLC28A1O00337 649 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms