RNA–Protein interactions for RNA: ENST00000468136.5

MSH5-213, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 690 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-213ENST00000468136 THAP5Q7Z6K1 395 aa9.58□□□□□ -0.88
MSH5-213ENST00000468136 VTCN1Q7Z7D3 282 aa9.58□□□□□ -0.88
MSH5-213ENST00000468136 ARHGEF39Q8N4T4 335 aa9.58□□□□□ -0.88
MSH5-213ENST00000468136 DEFB119Q8N690 84 aa9.58□□□□□ -0.88
MSH5-213ENST00000468136 CDRT4Q8N9R6 151 aa9.58□□□□□ -0.88
MSH5-213ENST00000468136 TOR1AIP2Q8NFQ8 470 aa9.58□□□□□ -0.88
MSH5-213ENST00000468136 FAM110BQ8TC76 370 aa9.58□□□□□ -0.88
MSH5-213ENST00000468136 GIPC3Q8TF64 312 aa9.58□□□□□ -0.88
MSH5-213ENST00000468136 XAGE5Q8WWM1 108 aa9.58□□□□□ -0.88
MSH5-213ENST00000468136 EDAQ92838 391 aa9.58□□□□□ -0.88
MSH5-213ENST00000468136 FCRL4Q96PJ5 515 aa9.58□□□□□ -0.88
MSH5-213ENST00000468136 APOL4Q9BPW4 351 aa9.58□□□□□ -0.88
MSH5-213ENST00000468136 TREX2Q9BQ50 279 aaPredicted RBP9.58□□□□□ -0.88
MSH5-213ENST00000468136 MACROD1Q9BQ69 325 aa9.58□□□□□ -0.88
MSH5-213ENST00000468136 POLR2J2Q9GZM3 115 aaKnown RBP9.58□□□□□ -0.88
MSH5-213ENST00000468136 POLR2J3Q9H1A7 115 aaKnown RBP9.58□□□□□ -0.88
MSH5-213ENST00000468136 ZNF556Q9HAH1 456 aa9.58□□□□□ -0.88
MSH5-213ENST00000468136 DUSP22Q9NRW4 184 aa9.58□□□□□ -0.88
MSH5-213ENST00000468136 FAM118AQ9NWS6 357 aa9.58□□□□□ -0.88
MSH5-213ENST00000468136 KLHL28Q9NXS3 571 aa9.58□□□□□ -0.88
MSH5-213ENST00000468136 C5AR2Q9P296 337 aa9.58□□□□□ -0.88
MSH5-213ENST00000468136 KIF17Q9P2E2 1029 aa9.58□□□□□ -0.88
MSH5-213ENST00000468136 LRIT1Q9P2V4 623 aa9.58□□□□□ -0.88
MSH5-213ENST00000468136 KCND3Q9UK17 655 aa9.58□□□□□ -0.88
MSH5-213ENST00000468136 SLC13A4Q9UKG4 626 aa9.58□□□□□ -0.88
MSH5-213ENST00000468136 FBXO4Q9UKT5 387 aa9.58□□□□□ -0.88
MSH5-213ENST00000468136 SLCO1B1Q9Y6L6 691 aa9.58□□□□□ -0.88
MSH5-213ENST00000468136 MN1Q10571 1320 aaPredicted RBP9.57□□□□□ -0.88
MSH5-213ENST00000468136 GLOD5A6NK44 160 aa9.57□□□□□ -0.88
MSH5-213ENST00000468136 TMEM229AB2RXF0 380 aa9.57□□□□□ -0.88
MSH5-213ENST00000468136 ZNF749O43361 778 aa9.57□□□□□ -0.88
MSH5-213ENST00000468136 HS6ST1O60243 411 aa9.57□□□□□ -0.88
MSH5-213ENST00000468136 CTNSO60931 367 aa9.57□□□□□ -0.88
MSH5-213ENST00000468136 SNAP29O95721 258 aa9.57□□□□□ -0.88
MSH5-213ENST00000468136 FESP07332 822 aa9.57□□□□□ -0.88
MSH5-213ENST00000468136 TDGF1P13385 188 aa9.57□□□□□ -0.88
MSH5-213ENST00000468136 CD247P20963 164 aa9.57□□□□□ -0.88
MSH5-213ENST00000468136 AQP1P29972 269 aa9.57□□□□□ -0.88
MSH5-213ENST00000468136 PRKAR1BP31321 381 aa9.57□□□□□ -0.88
MSH5-213ENST00000468136 RRM2P31350 389 aa9.57□□□□□ -0.88
MSH5-213ENST00000468136 TPD52P55327 224 aaPredicted RBP9.57□□□□□ -0.88
MSH5-213ENST00000468136 HSD17B7P56937 341 aa9.57□□□□□ -0.88
MSH5-213ENST00000468136 CXCR4P61073 352 aa9.57□□□□□ -0.88
MSH5-213ENST00000468136 HSD11B2P80365 405 aa9.57□□□□□ -0.88
MSH5-213ENST00000468136 MYBPC1Q00872 1141 aa9.57□□□□□ -0.88
MSH5-213ENST00000468136 TEKQ02763 1124 aa9.57□□□□□ -0.88
MSH5-213ENST00000468136 MAP4K2Q12851 820 aa9.57□□□□□ -0.88
MSH5-213ENST00000468136 DEFB133Q30KQ1 61 aa9.57□□□□□ -0.88
MSH5-213ENST00000468136 ZNF628Q5EBL2 1059 aa9.57□□□□□ -0.88
MSH5-213ENST00000468136 COLEC12Q5KU26 742 aa9.57□□□□□ -0.88
MSH5-213ENST00000468136 CWF19L1Q69YN2 538 aaKnown RBP9.57□□□□□ -0.88
MSH5-213ENST00000468136 HEPHL1Q6MZM0 1159 aa9.57□□□□□ -0.88
MSH5-213ENST00000468136 MFSD12Q6NUT3 480 aa9.57□□□□□ -0.88
MSH5-213ENST00000468136 DHRS4L2Q6PKH6 230 aa9.57□□□□□ -0.88
MSH5-213ENST00000468136 TMEM107Q6UX40 140 aa9.57□□□□□ -0.88
MSH5-213ENST00000468136 C16orf62Q7Z3J2 963 aa9.57□□□□□ -0.88
MSH5-213ENST00000468136 SZRD1Q7Z422 152 aa9.57□□□□□ -0.88
MSH5-213ENST00000468136 FAM181AQ8N9Y4 354 aa9.57□□□□□ -0.88
MSH5-213ENST00000468136 ATG16L2Q8NAA4 619 aa9.57□□□□□ -0.88
MSH5-213ENST00000468136 TSPAN14Q8NG11 270 aa9.57□□□□□ -0.88
MSH5-213ENST00000468136 OR9A2Q8NGT5 310 aa9.57□□□□□ -0.88
MSH5-213ENST00000468136 ADAMTS16Q8TE57 1224 aa9.57□□□□□ -0.88
MSH5-213ENST00000468136 HDAC2Q92769 488 aaKnown RBP9.57□□□□□ -0.88
MSH5-213ENST00000468136 NAT6Q93015 286 aa9.57□□□□□ -0.88
MSH5-213ENST00000468136 ZC3H10Q96K80 434 aaKnown RBP9.57□□□□□ -0.88
MSH5-213ENST00000468136 DHRS1Q96LJ7 313 aa9.57□□□□□ -0.88
MSH5-213ENST00000468136 MAP3K3Q99759 626 aa9.57□□□□□ -0.88
MSH5-213ENST00000468136 ING2Q9H160 280 aa9.57□□□□□ -0.88
MSH5-213ENST00000468136 PIGUQ9H490 435 aa9.57□□□□□ -0.88
MSH5-213ENST00000468136 TOR3AQ9H497 397 aa9.57□□□□□ -0.88
MSH5-213ENST00000468136 ANKRD19PQ9H560 264 aa9.57□□□□□ -0.88
MSH5-213ENST00000468136 ARMC7Q9H6L4 198 aa9.57□□□□□ -0.88
MSH5-213ENST00000468136 MTHFD2LQ9H903 347 aaPredicted RBP9.57□□□□□ -0.88
MSH5-213ENST00000468136 SYNPO2LQ9H987 977 aa9.57□□□□□ -0.88
MSH5-213ENST00000468136 FANCEQ9HB96 536 aa9.57□□□□□ -0.88
MSH5-213ENST00000468136 VCX3AQ9NNX9 186 aa9.57□□□□□ -0.88
MSH5-213ENST00000468136 SOHLH2Q9NX45 425 aa9.57□□□□□ -0.88
MSH5-213ENST00000468136 PDP1Q9P0J1 537 aaPredicted RBP9.57□□□□□ -0.88
MSH5-213ENST00000468136 MUTYHQ9UIF7 546 aa9.57□□□□□ -0.88
MSH5-213ENST00000468136 PILRBQ9UKJ0 227 aa9.57□□□□□ -0.88
MSH5-213ENST00000468136 TMCC3Q9ULS5 477 aa9.57□□□□□ -0.88
MSH5-213ENST00000468136 ABCG2Q9UNQ0 655 aa9.57□□□□□ -0.88
MSH5-213ENST00000468136 ZNF232Q9UNY5 417 aa9.57□□□□□ -0.88
MSH5-213ENST00000468136 POFUT2Q9Y2G5 429 aa9.57□□□□□ -0.88
MSH5-213ENST00000468136 MMACHCQ9Y4U1 282 aa9.57□□□□□ -0.88
MSH5-213ENST00000468136 LYVE1Q9Y5Y7 322 aa9.57□□□□□ -0.88
MSH5-213ENST00000468136 SNRNP200O75643 2136 aaKnown RBP9.56□□□□□ -0.88
MSH5-213ENST00000468136 GOLGA4Q13439 2230 aaKnown RBP9.56□□□□□ -0.88
MSH5-213ENST00000468136 IGHV1OR21-1A0A087WYE8 117 aa9.56□□□□□ -0.88
MSH5-213ENST00000468136 A0A1B0GTQ1 180 aa9.56□□□□□ -0.88
MSH5-213ENST00000468136 LOC100130705A0A1B0GUX0 176 aa9.56□□□□□ -0.88
MSH5-213ENST00000468136 A0A1B0GVT2 93 aa9.56□□□□□ -0.88
MSH5-213ENST00000468136 TRIM64CA6NLI5 447 aa9.56□□□□□ -0.88
MSH5-213ENST00000468136 hCG_2039718K7EN88 272 aa9.56□□□□□ -0.88
MSH5-213ENST00000468136 CHST10O43529 356 aa9.56□□□□□ -0.88
MSH5-213ENST00000468136 B4GALT2O60909 372 aa9.56□□□□□ -0.88
MSH5-213ENST00000468136 ALPPP05187 535 aa9.56□□□□□ -0.88
MSH5-213ENST00000468136 THBS1P07996 1170 aa9.56□□□□□ -0.88
MSH5-213ENST00000468136 ALOX5P09917 674 aa9.56□□□□□ -0.88
MSH5-213ENST00000468136 CCDC159P0C7I6 412 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms