RNA–Protein interactions for RNA: ENST00000467681.5

SSBP1-206, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 2

Gene SSBP1, Length 630 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-206ENST00000467681 SSR4P51571 173 aa12.62□□□□□ -0.39
SSBP1-206ENST00000467681 OC90Q02509 493 aaPredicted RBP12.62□□□□□ -0.39
SSBP1-206ENST00000467681 PDE7AQ13946 482 aa12.62□□□□□ -0.39
SSBP1-206ENST00000467681 OR1C1Q15619 314 aa12.62□□□□□ -0.39
SSBP1-206ENST00000467681 LTB4RQ15722 352 aa12.62□□□□□ -0.39
SSBP1-206ENST00000467681 TRMT12Q53H54 448 aaKnown RBP12.62□□□□□ -0.39
SSBP1-206ENST00000467681 ZNF628Q5EBL2 1059 aa12.62□□□□□ -0.39
SSBP1-206ENST00000467681 C6orf163Q5TEZ5 329 aa12.62□□□□□ -0.39
SSBP1-206ENST00000467681 SPINK14Q6IE38 97 aa12.62□□□□□ -0.39
SSBP1-206ENST00000467681 RPUSD3Q6P087 351 aaKnown RBP12.62□□□□□ -0.39
SSBP1-206ENST00000467681 SLC29A4Q7RTT9 530 aa12.62□□□□□ -0.39
SSBP1-206ENST00000467681 R3HCC1LQ7Z5L2 792 aaKnown RBP12.62□□□□□ -0.39
SSBP1-206ENST00000467681 C9orf40Q8IXQ3 194 aa12.62□□□□□ -0.39
SSBP1-206ENST00000467681 VWA5B2Q8N398 1253 aa12.62□□□□□ -0.39
SSBP1-206ENST00000467681 TMEM156Q8N614 296 aa12.62□□□□□ -0.39
SSBP1-206ENST00000467681 HORMAD2Q8N7B1 307 aa12.62□□□□□ -0.39
SSBP1-206ENST00000467681 MDS2Q8NDY4 140 aa12.62□□□□□ -0.39
SSBP1-206ENST00000467681 CLHC1Q8NHS4 586 aa12.62□□□□□ -0.39
SSBP1-206ENST00000467681 PIWIL2Q8TC59 973 aaKnown RBP12.62□□□□□ -0.39
SSBP1-206ENST00000467681 DYDC1Q8WWB3 177 aa12.62□□□□□ -0.39
SSBP1-206ENST00000467681 TP53INP1Q96A56 240 aa12.62□□□□□ -0.39
SSBP1-206ENST00000467681 PPCDCQ96CD2 204 aa12.62□□□□□ -0.39
SSBP1-206ENST00000467681 C1orf50Q9BV19 199 aa12.62□□□□□ -0.39
SSBP1-206ENST00000467681 BRINP2Q9C0B6 783 aa12.62□□□□□ -0.39
SSBP1-206ENST00000467681 RYDENQ9NUL5 291 aaKnown RBP12.62□□□□□ -0.39
SSBP1-206ENST00000467681 ANKRD10Q9NXR5 420 aa12.62□□□□□ -0.39
SSBP1-206ENST00000467681 NOP53Q9NZM5 478 aaKnown RBP12.62□□□□□ -0.39
SSBP1-206ENST00000467681 SH3BP4Q9P0V3 963 aa12.62□□□□□ -0.39
SSBP1-206ENST00000467681 LRFN1Q9P244 771 aa12.62□□□□□ -0.39
SSBP1-206ENST00000467681 PCDHGA10Q9Y5H3 936 aa12.62□□□□□ -0.39
SSBP1-206ENST00000467681 C2orf92A0A1B0GVN3 265 aa12.61□□□□□ -0.39
SSBP1-206ENST00000467681 ZNF195O14628 629 aa12.61□□□□□ -0.39
SSBP1-206ENST00000467681 SLC28A2O43868 658 aa12.61□□□□□ -0.39
SSBP1-206ENST00000467681 PLOD3O60568 738 aa12.61□□□□□ -0.39
SSBP1-206ENST00000467681 ZNF354AO60765 605 aaPredicted RBP12.61□□□□□ -0.39
SSBP1-206ENST00000467681 BCAS2O75934 225 aaPredicted RBP12.61□□□□□ -0.39
SSBP1-206ENST00000467681 NEURL1O76050 574 aa12.61□□□□□ -0.39
SSBP1-206ENST00000467681 CBX7O95931 251 aa12.61□□□□□ -0.39
SSBP1-206ENST00000467681 DDX5P17844 614 aaKnown RBP12.61□□□□□ -0.39
SSBP1-206ENST00000467681 PRPS1L1P21108 318 aa12.61□□□□□ -0.39
SSBP1-206ENST00000467681 PTGER1P34995 402 aa12.61□□□□□ -0.39
SSBP1-206ENST00000467681 RPL3P39023 403 aaKnown RBP12.61□□□□□ -0.39
SSBP1-206ENST00000467681 NCBP2P52298 156 aaKnown RBP eCLIP12.61□□□□□ -0.392e-8■□□□□ 9.2
SSBP1-206ENST00000467681 MLLT10P55197 1068 aa12.61□□□□□ -0.39
SSBP1-206ENST00000467681 CLDN8P56748 225 aa12.61□□□□□ -0.39
SSBP1-206ENST00000467681 C21orf58P58505 322 aa12.61□□□□□ -0.39
SSBP1-206ENST00000467681 INPP5JQ15735 1006 aaPredicted RBP12.61□□□□□ -0.39
SSBP1-206ENST00000467681 SLC25A25Q6KCM7 469 aa12.61□□□□□ -0.39
SSBP1-206ENST00000467681 OGFOD2Q6N063 350 aa12.61□□□□□ -0.39
SSBP1-206ENST00000467681 ANKRD26P1Q6NSI1 321 aa12.61□□□□□ -0.39
SSBP1-206ENST00000467681 PRICKLE2Q7Z3G6 844 aa12.61□□□□□ -0.39
SSBP1-206ENST00000467681 ZNF227Q86WZ6 799 aa12.61□□□□□ -0.39
SSBP1-206ENST00000467681 RIMKLAQ8IXN7 391 aa12.61□□□□□ -0.39
SSBP1-206ENST00000467681 GPALPP1Q8IXQ4 340 aa12.61□□□□□ -0.39
SSBP1-206ENST00000467681 FAM9CQ8IZT9 166 aa12.61□□□□□ -0.39
SSBP1-206ENST00000467681 CISD2Q8N5K1 135 aaKnown RBP12.61□□□□□ -0.39
SSBP1-206ENST00000467681 SLC15A4Q8N697 577 aa12.61□□□□□ -0.39
SSBP1-206ENST00000467681 ZNF441Q8N8Z8 693 aa12.61□□□□□ -0.39
SSBP1-206ENST00000467681 OR9A2Q8NGT5 310 aa12.61□□□□□ -0.39
SSBP1-206ENST00000467681 KAT2AQ92830 837 aa12.61□□□□□ -0.39
SSBP1-206ENST00000467681 ADIPOR1Q96A54 375 aa12.61□□□□□ -0.39
SSBP1-206ENST00000467681 COQ8BQ96D53 544 aa12.61□□□□□ -0.39
SSBP1-206ENST00000467681 AMDHD1Q96NU7 426 aa12.61□□□□□ -0.39
SSBP1-206ENST00000467681 SIGLEC12Q96PQ1 595 aa12.61□□□□□ -0.39
SSBP1-206ENST00000467681 RASL10BQ96S79 203 aa12.61□□□□□ -0.39
SSBP1-206ENST00000467681 WWTR1Q9GZV5 400 aa12.61□□□□□ -0.39
SSBP1-206ENST00000467681 EPN3Q9H201 632 aa12.61□□□□□ -0.39
SSBP1-206ENST00000467681 GLIPR2Q9H4G4 154 aa12.61□□□□□ -0.39
SSBP1-206ENST00000467681 WDR55Q9H6Y2 383 aaPredicted RBP12.61□□□□□ -0.39
SSBP1-206ENST00000467681 SLCO1B3Q9NPD5 702 aa12.61□□□□□ -0.39
SSBP1-206ENST00000467681 MARCOQ9UEW3 520 aaPredicted RBP12.61□□□□□ -0.39
SSBP1-206ENST00000467681 CFL2Q9Y281 166 aa12.61□□□□□ -0.39
SSBP1-206ENST00000467681 PCDHGB6Q9Y5F9 930 aa12.61□□□□□ -0.39
SSBP1-206ENST00000467681 PLOD2O00469 737 aa12.6□□□□□ -0.39
SSBP1-206ENST00000467681 SP1P08047 785 aa12.6□□□□□ -0.39
SSBP1-206ENST00000467681 CD46P15529 392 aa12.6□□□□□ -0.39
SSBP1-206ENST00000467681 NTSP30990 170 aa12.6□□□□□ -0.39
SSBP1-206ENST00000467681 DIO3P55073 304 aa12.6□□□□□ -0.39
SSBP1-206ENST00000467681 MRPS35P82673 323 aaKnown RBP12.6□□□□□ -0.39
SSBP1-206ENST00000467681 DUSP8Q13202 625 aa12.6□□□□□ -0.39
SSBP1-206ENST00000467681 ESPL1Q14674 2120 aa12.6□□□□□ -0.39
SSBP1-206ENST00000467681 PTGR1Q14914 329 aa12.6□□□□□ -0.39
SSBP1-206ENST00000467681 EXOSC7Q15024 291 aaKnown RBP12.6□□□□□ -0.39
SSBP1-206ENST00000467681 EBPQ15125 230 aaKnown RBP12.6□□□□□ -0.39
SSBP1-206ENST00000467681 ZNF385BQ569K4 471 aa12.6□□□□□ -0.39
SSBP1-206ENST00000467681 HSP90B2PQ58FF3 399 aa12.6□□□□□ -0.39
SSBP1-206ENST00000467681 ZNF766Q5HY98 468 aa12.6□□□□□ -0.39
SSBP1-206ENST00000467681 CPTPQ5TA50 214 aa12.6□□□□□ -0.39
SSBP1-206ENST00000467681 FHL5Q5TD97 284 aa12.6□□□□□ -0.39
SSBP1-206ENST00000467681 HLA-DQA1Q5Y7H0 255 aa12.6□□□□□ -0.39
SSBP1-206ENST00000467681 RGS9BPQ6ZS82 235 aa12.6□□□□□ -0.39
SSBP1-206ENST00000467681 MAVSQ7Z434 540 aa12.6□□□□□ -0.39
SSBP1-206ENST00000467681 SPATA19Q7Z5L4 167 aa12.6□□□□□ -0.39
SSBP1-206ENST00000467681 KRTCAP2Q8N6L1 136 aa12.6□□□□□ -0.39
SSBP1-206ENST00000467681 SIMC1Q8NDZ2 872 aa12.6□□□□□ -0.39
SSBP1-206ENST00000467681 OR7A2PQ8NGA2 310 aa12.6□□□□□ -0.39
SSBP1-206ENST00000467681 C16orf52Q8NHV5 167 aa12.6□□□□□ -0.39
SSBP1-206ENST00000467681 ACTRT2Q8TDY3 377 aa12.6□□□□□ -0.39
SSBP1-206ENST00000467681 ELP4Q96EB1 424 aa12.6□□□□□ -0.39
SSBP1-206ENST00000467681 MAGEB18Q96M61 343 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms