RNA–Protein interactions for RNA: ENST00000466959.1

PDCD11-202, Transcript of programmed cell death 11, humanhuman

TSL 2

Gene PDCD11, Length 500 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD11-202ENST00000466959 DNAJB8Q8NHS0 232 aa12.38□□□□□ -0.43
PDCD11-202ENST00000466959 GOT1L1Q8NHS2 421 aaPredicted RBP12.38□□□□□ -0.43
PDCD11-202ENST00000466959 PTPMT1Q8WUK0 201 aaPredicted RBP12.38□□□□□ -0.43
PDCD11-202ENST00000466959 DAZLQ92904 295 aaKnown RBP12.38□□□□□ -0.43
PDCD11-202ENST00000466959 RIT1Q92963 219 aa12.38□□□□□ -0.43
PDCD11-202ENST00000466959 C8orf44Q96CB5 159 aa12.38□□□□□ -0.43
PDCD11-202ENST00000466959 RCN3Q96D15 328 aa12.38□□□□□ -0.43
PDCD11-202ENST00000466959 VPS50Q96JG6 964 aa12.38□□□□□ -0.43
PDCD11-202ENST00000466959 PANX1Q96RD7 426 aa12.38□□□□□ -0.43
PDCD11-202ENST00000466959 INPP5KQ9BT40 448 aa12.38□□□□□ -0.43
PDCD11-202ENST00000466959 ZNF700Q9H0M5 742 aa12.38□□□□□ -0.43
PDCD11-202ENST00000466959 SIRT3Q9NTG7 399 aaPredicted RBP12.38□□□□□ -0.43
PDCD11-202ENST00000466959 WDR70Q9NW82 654 aa12.38□□□□□ -0.43
PDCD11-202ENST00000466959 TAS2R9Q9NYW1 312 aa12.38□□□□□ -0.43
PDCD11-202ENST00000466959 MAT2BQ9NZL9 334 aa12.38□□□□□ -0.43
PDCD11-202ENST00000466959 CFAP46Q8IYW2 2715 aa12.38□□□□□ -0.43
PDCD11-202ENST00000466959 NUP214P35658 2090 aaPredicted RBP12.38□□□□□ -0.43
PDCD11-202ENST00000466959 TENM4Q6N022 2769 aa12.37□□□□□ -0.43
PDCD11-202ENST00000466959 SAGE2PA6NJ88 616 aa12.37□□□□□ -0.43
PDCD11-202ENST00000466959 PLOD2O00469 737 aa12.37□□□□□ -0.43
PDCD11-202ENST00000466959 MRASO14807 208 aa12.37□□□□□ -0.43
PDCD11-202ENST00000466959 ERN1O75460 977 aaKnown RBP12.37□□□□□ -0.43
PDCD11-202ENST00000466959 UBOX5O94941 541 aa12.37□□□□□ -0.43
PDCD11-202ENST00000466959 KCNH1O95259 989 aa12.37□□□□□ -0.43
PDCD11-202ENST00000466959 ABCB1P08183 1280 aaPredicted RBP12.37□□□□□ -0.43
PDCD11-202ENST00000466959 CT62P0C5K7 136 aa12.37□□□□□ -0.43
PDCD11-202ENST00000466959 ZCCHC18P0CG32 403 aa12.37□□□□□ -0.43
PDCD11-202ENST00000466959 CDKN2CP42773 168 aa12.37□□□□□ -0.43
PDCD11-202ENST00000466959 PCOLCEQ15113 449 aa12.37□□□□□ -0.43
PDCD11-202ENST00000466959 C6orf10Q5SRN2 563 aa12.37□□□□□ -0.43
PDCD11-202ENST00000466959 PAPD4Q6PIY7 484 aaKnown RBP12.37□□□□□ -0.43
PDCD11-202ENST00000466959 FAM111BQ6SJ93 734 aa12.37□□□□□ -0.43
PDCD11-202ENST00000466959 KIRREL2Q6UWL6 708 aa12.37□□□□□ -0.43
PDCD11-202ENST00000466959 TMEM107Q6UX40 140 aa12.37□□□□□ -0.43
PDCD11-202ENST00000466959 TMEM64Q6YI46 380 aa12.37□□□□□ -0.43
PDCD11-202ENST00000466959 MRGPREQ86SM8 312 aa12.37□□□□□ -0.43
PDCD11-202ENST00000466959 VWA5B2Q8N398 1253 aa12.37□□□□□ -0.43
PDCD11-202ENST00000466959 PCYOX1LQ8NBM8 494 aa12.37□□□□□ -0.43
PDCD11-202ENST00000466959 SFXN5Q8TD22 340 aa12.37□□□□□ -0.43
PDCD11-202ENST00000466959 ADAMTS17Q8TE56 1095 aa12.37□□□□□ -0.43
PDCD11-202ENST00000466959 KAT2AQ92830 837 aa12.37□□□□□ -0.43
PDCD11-202ENST00000466959 CTHRC1Q96CG8 243 aa12.37□□□□□ -0.43
PDCD11-202ENST00000466959 ELP4Q96EB1 424 aa12.37□□□□□ -0.43
PDCD11-202ENST00000466959 NAF1Q96HR8 494 aaKnown RBP12.37□□□□□ -0.43
PDCD11-202ENST00000466959 FBXL20Q96IG2 436 aa12.37□□□□□ -0.43
PDCD11-202ENST00000466959 NSL1Q96IY1 281 aa12.37□□□□□ -0.43
PDCD11-202ENST00000466959 ART5Q96L15 291 aa12.37□□□□□ -0.43
PDCD11-202ENST00000466959 IP6K3Q96PC2 410 aa12.37□□□□□ -0.43
PDCD11-202ENST00000466959 LPAR4Q99677 370 aa12.37□□□□□ -0.43
PDCD11-202ENST00000466959 NPAS2Q99743 824 aa12.37□□□□□ -0.43
PDCD11-202ENST00000466959 WDR77Q9BQA1 342 aaPredicted RBP12.37□□□□□ -0.43
PDCD11-202ENST00000466959 MESP1Q9BRJ9 268 aa12.37□□□□□ -0.43
PDCD11-202ENST00000466959 TRIM4Q9C037 500 aa12.37□□□□□ -0.43
PDCD11-202ENST00000466959 PAIP1Q9H074 479 aaKnown RBP12.37□□□□□ -0.43
PDCD11-202ENST00000466959 CXorf36Q9H7Y0 433 aa12.37□□□□□ -0.43
PDCD11-202ENST00000466959 PTGFRNQ9P2B2 879 aa12.37□□□□□ -0.43
PDCD11-202ENST00000466959 ZNF639Q9UID6 485 aa12.37□□□□□ -0.43
PDCD11-202ENST00000466959 VPS4AQ9UN37 437 aa12.37□□□□□ -0.43
PDCD11-202ENST00000466959 ERVK-11Q9UQG0 969 aa12.37□□□□□ -0.43
PDCD11-202ENST00000466959 CLCA3PQ9Y6N3 262 aa12.37□□□□□ -0.43
PDCD11-202ENST00000466959 CELSR3Q9NYQ7 3312 aa12.36□□□□□ -0.43
PDCD11-202ENST00000466959 PCSK5Q92824 1860 aa12.36□□□□□ -0.43
PDCD11-202ENST00000466959 A0A087WV62 115 aa12.36□□□□□ -0.43
PDCD11-202ENST00000466959 IGHV1-45A0A0A0MS14 117 aa12.36□□□□□ -0.43
PDCD11-202ENST00000466959 IGHV3-20A0A0C4DH32 117 aa12.36□□□□□ -0.43
PDCD11-202ENST00000466959 KLK10O43240 276 aa12.36□□□□□ -0.43
PDCD11-202ENST00000466959 EMC8O43402 210 aa12.36□□□□□ -0.43
PDCD11-202ENST00000466959 PLOD3O60568 738 aa12.36□□□□□ -0.43
PDCD11-202ENST00000466959 SEC24DO94855 1032 aaPredicted RBP12.36□□□□□ -0.43
PDCD11-202ENST00000466959 CBX6O95503 412 aa12.36□□□□□ -0.43
PDCD11-202ENST00000466959 DDAH2O95865 285 aa12.36□□□□□ -0.43
PDCD11-202ENST00000466959 ESRRAP11474 423 aaPredicted RBP12.36□□□□□ -0.43
PDCD11-202ENST00000466959 COX6A1P12074 109 aa12.36□□□□□ -0.43
PDCD11-202ENST00000466959 HOXB9P17482 250 aaPredicted RBP12.36□□□□□ -0.43
PDCD11-202ENST00000466959 PTPN6P29350 595 aa12.36□□□□□ -0.43
PDCD11-202ENST00000466959 SOAT1P35610 550 aa12.36□□□□□ -0.43
PDCD11-202ENST00000466959 SOX18P35713 384 aa12.36□□□□□ -0.43
PDCD11-202ENST00000466959 MC3RP41968 323 aa12.36□□□□□ -0.43
PDCD11-202ENST00000466959 PGDP52209 483 aa12.36□□□□□ -0.43
PDCD11-202ENST00000466959 MRPS35P82673 323 aaKnown RBP12.36□□□□□ -0.43
PDCD11-202ENST00000466959 SRSF6Q13247 344 aaKnown RBP12.36□□□□□ -0.43
PDCD11-202ENST00000466959 NFYCQ13952 458 aa12.36□□□□□ -0.43
PDCD11-202ENST00000466959 ZNF267Q14586 743 aaPredicted RBP12.36□□□□□ -0.43
PDCD11-202ENST00000466959 TRMT5Q32P41 509 aaKnown RBP12.36□□□□□ -0.43
PDCD11-202ENST00000466959 LRIF1Q5T3J3 769 aa12.36□□□□□ -0.43
PDCD11-202ENST00000466959 FHL5Q5TD97 284 aa12.36□□□□□ -0.43
PDCD11-202ENST00000466959 DNAJC14Q6Y2X3 702 aaPredicted RBP12.36□□□□□ -0.43
PDCD11-202ENST00000466959 DHDDSQ86SQ9 333 aa12.36□□□□□ -0.43
PDCD11-202ENST00000466959 ZNF843Q8N446 348 aa12.36□□□□□ -0.43
PDCD11-202ENST00000466959 TRIML2Q8N7C3 387 aa12.36□□□□□ -0.43
PDCD11-202ENST00000466959 MORN4Q8NDC4 146 aa12.36□□□□□ -0.43
PDCD11-202ENST00000466959 NFAM1Q8NET5 270 aaPredicted RBP12.36□□□□□ -0.43
PDCD11-202ENST00000466959 OR7G2Q8NG99 324 aa12.36□□□□□ -0.43
PDCD11-202ENST00000466959 OR11G2Q8NGC1 345 aa12.36□□□□□ -0.43
PDCD11-202ENST00000466959 SLC2A12Q8TD20 617 aa12.36□□□□□ -0.43
PDCD11-202ENST00000466959 DOK4Q8TEW6 326 aa12.36□□□□□ -0.43
PDCD11-202ENST00000466959 MOAP1Q96BY2 351 aa12.36□□□□□ -0.43
PDCD11-202ENST00000466959 PHF12Q96QT6 1004 aa12.36□□□□□ -0.43
PDCD11-202ENST00000466959 TUBB6Q9BUF5 446 aa12.36□□□□□ -0.43
PDCD11-202ENST00000466959 CNPPD1Q9BV87 410 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms