RNA–Protein interactions for RNA: ENST00000465727.5

SDF4-205, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 2,095 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-205ENST00000465727 OR2AP1Q8NGE2 309 aa18.69■□□□□ 0.58
SDF4-205ENST00000465727 WFDC5Q8TCV5 224 aa18.69■□□□□ 0.58
SDF4-205ENST00000465727 PHF21AQ96BD5 680 aa18.69■□□□□ 0.58
SDF4-205ENST00000465727 ECHDC3Q96DC8 303 aa18.69■□□□□ 0.58
SDF4-205ENST00000465727 RNFT2Q96EX2 444 aa18.69■□□□□ 0.58
SDF4-205ENST00000465727 C17orf62Q9BQA9 187 aa18.69■□□□□ 0.58
SDF4-205ENST00000465727 PRR14Q9BWN1 585 aa18.69■□□□□ 0.58
SDF4-205ENST00000465727 TMEM121BQ9BXQ6 578 aaPredicted RBP18.69■□□□□ 0.58
SDF4-205ENST00000465727 PPIL3Q9H2H8 161 aaKnown RBP18.69■□□□□ 0.58
SDF4-205ENST00000465727 BCHEP06276 602 aa18.69■□□□□ 0.58
SDF4-205ENST00000465727 GALP22466 123 aa18.69■□□□□ 0.58
SDF4-205ENST00000465727 STOMP27105 288 aa18.69■□□□□ 0.58
SDF4-205ENST00000465727 AVPR1BP47901 424 aa18.69■□□□□ 0.58
SDF4-205ENST00000465727 KCNJ5P48544 419 aa18.69■□□□□ 0.58
SDF4-205ENST00000465727 SPINT3P49223 89 aa18.69■□□□□ 0.58
SDF4-205ENST00000465727 ATN1P54259 1190 aaPredicted RBP18.69■□□□□ 0.58
SDF4-205ENST00000465727 PLA1AQ53H76 456 aa18.69■□□□□ 0.58
SDF4-205ENST00000465727 RTP2Q5QGT7 225 aa18.69■□□□□ 0.58
SDF4-205ENST00000465727 DEF8Q6ZN54 512 aa18.69■□□□□ 0.58
SDF4-205ENST00000465727 LRRC56Q8IYG6 542 aaPredicted RBP18.69■□□□□ 0.58
SDF4-205ENST00000465727 APCDD1Q8J025 514 aa18.69■□□□□ 0.58
SDF4-205ENST00000465727 C2orf69Q8N8R5 385 aa18.69■□□□□ 0.58
SDF4-205ENST00000465727 NEIL3Q8TAT5 605 aa18.69■□□□□ 0.58
SDF4-205ENST00000465727 NEURL3Q96EH8 262 aa18.69■□□□□ 0.58
SDF4-205ENST00000465727 WACQ9BTA9 647 aa18.69■□□□□ 0.58
SDF4-205ENST00000465727 ACAT2Q9BWD1 397 aa18.69■□□□□ 0.58
SDF4-205ENST00000465727 MGAT4AQ9UM21 535 aa18.69■□□□□ 0.58
SDF4-205ENST00000465727 STON1Q9Y6Q2 735 aa18.69■□□□□ 0.58
SDF4-205ENST00000465727 KIF26AQ9ULI4 1882 aaPredicted RBP18.68■□□□□ 0.58
SDF4-205ENST00000465727 A0A0A6YYJ9 748 aa18.68■□□□□ 0.58
SDF4-205ENST00000465727 CHST10O43529 356 aa18.68■□□□□ 0.58
SDF4-205ENST00000465727 CTRB1P17538 263 aa18.68■□□□□ 0.58
SDF4-205ENST00000465727 IMPA1P29218 277 aa18.68■□□□□ 0.58
SDF4-205ENST00000465727 PTGS2P35354 604 aa18.68■□□□□ 0.58
SDF4-205ENST00000465727 OPRD1P41143 372 aa18.68■□□□□ 0.58
SDF4-205ENST00000465727 MTNR1AP48039 350 aa18.68■□□□□ 0.58
SDF4-205ENST00000465727 TAS2R50P59544 299 aa18.68■□□□□ 0.58
SDF4-205ENST00000465727 ACSM1Q08AH1 577 aa18.68■□□□□ 0.58
SDF4-205ENST00000465727 GPR176Q14439 515 aa18.68■□□□□ 0.58
SDF4-205ENST00000465727 CTRB2Q6GPI1 263 aa18.68■□□□□ 0.58
SDF4-205ENST00000465727 FUT10Q6P4F1 479 aa18.68■□□□□ 0.58
SDF4-205ENST00000465727 ADGRF3Q8IZF5 1079 aa18.68■□□□□ 0.58
SDF4-205ENST00000465727 ZNF485Q8NCK3 441 aa18.68■□□□□ 0.58
SDF4-205ENST00000465727 WDR34Q96EX3 536 aa18.68■□□□□ 0.58
SDF4-205ENST00000465727 ZNF607Q96SK3 696 aa18.68■□□□□ 0.58
SDF4-205ENST00000465727 EFCAB11Q9BUY7 163 aa18.68■□□□□ 0.58
SDF4-205ENST00000465727 C1QTNF7Q9BXJ2 289 aa18.68■□□□□ 0.58
SDF4-205ENST00000465727 DMRT3Q9NQL9 472 aa18.68■□□□□ 0.58
SDF4-205ENST00000465727 AGRPO00253 132 aa18.67■□□□□ 0.58
SDF4-205ENST00000465727 LZTS3O60299 673 aaPredicted RBP18.67■□□□□ 0.58
SDF4-205ENST00000465727 ANXA3P12429 323 aa18.67■□□□□ 0.58
SDF4-205ENST00000465727 GSTM3P21266 225 aa18.67■□□□□ 0.58
SDF4-205ENST00000465727 AGFG1P52594 562 aaKnown RBP18.67■□□□□ 0.58
SDF4-205ENST00000465727 CYP4F8P98187 520 aa18.67■□□□□ 0.58
SDF4-205ENST00000465727 FCN2Q15485 313 aa18.67■□□□□ 0.58
SDF4-205ENST00000465727 SNAPC1Q16533 368 aa18.67■□□□□ 0.58
SDF4-205ENST00000465727 ZNF284Q2VY69 593 aa18.67■□□□□ 0.58
SDF4-205ENST00000465727 RPS26P11Q5JNZ5 115 aaPredicted RBP18.67■□□□□ 0.58
SDF4-205ENST00000465727 HACD4Q5VWC8 232 aa18.67■□□□□ 0.58
SDF4-205ENST00000465727 TMPRSS11BQ86T26 416 aa18.67■□□□□ 0.58
SDF4-205ENST00000465727 GPALPP1Q8IXQ4 340 aa18.67■□□□□ 0.58
SDF4-205ENST00000465727 SMG7Q92540 1137 aaKnown RBP18.67■□□□□ 0.58
SDF4-205ENST00000465727 NEIL2Q969S2 332 aa18.67■□□□□ 0.58
SDF4-205ENST00000465727 NACC2Q96BF6 587 aa18.67■□□□□ 0.58
SDF4-205ENST00000465727 SCMH1Q96GD3 660 aa18.67■□□□□ 0.58
SDF4-205ENST00000465727 CCDC120Q96HB5 630 aa18.67■□□□□ 0.58
SDF4-205ENST00000465727 TMEM19Q96HH6 336 aa18.67■□□□□ 0.58
SDF4-205ENST00000465727 SENP5Q96HI0 755 aaPredicted RBP18.67■□□□□ 0.58
SDF4-205ENST00000465727 FAM83CQ9BQN1 747 aa18.67■□□□□ 0.58
SDF4-205ENST00000465727 ZFP64Q9NPA5 681 aa18.67■□□□□ 0.58
SDF4-205ENST00000465727 DOCK6Q96HP0 2047 aa18.67■□□□□ 0.58
SDF4-205ENST00000465727 I3L521 148 aa18.67■□□□□ 0.58
SDF4-205ENST00000465727 AKAP8O43823 692 aaKnown RBP18.67■□□□□ 0.58
SDF4-205ENST00000465727 ZNF821O75541 412 aaPredicted RBP18.67■□□□□ 0.58
SDF4-205ENST00000465727 SLC16A8O95907 504 aa18.67■□□□□ 0.58
SDF4-205ENST00000465727 IFNA7P01567 189 aa18.67■□□□□ 0.58
SDF4-205ENST00000465727 LIMS3P0CW19 117 aa18.67■□□□□ 0.58
SDF4-205ENST00000465727 LIMS4P0CW20 117 aa18.67■□□□□ 0.58
SDF4-205ENST00000465727 HMGA1P17096 107 aaKnown RBP18.67■□□□□ 0.58
SDF4-205ENST00000465727 UBE3AQ05086 875 aa18.67■□□□□ 0.58
SDF4-205ENST00000465727 MFSD13AQ14CX5 517 aa18.67■□□□□ 0.58
SDF4-205ENST00000465727 HSD17B12Q53GQ0 312 aa18.67■□□□□ 0.58
SDF4-205ENST00000465727 ENTPD8Q5MY95 495 aa18.67■□□□□ 0.58
SDF4-205ENST00000465727 CD276Q5ZPR3 534 aa18.67■□□□□ 0.58
SDF4-205ENST00000465727 ACSM5Q6NUN0 579 aa18.67■□□□□ 0.58
SDF4-205ENST00000465727 RFLNAQ6ZTI6 216 aa18.67■□□□□ 0.58
SDF4-205ENST00000465727 HDHD2Q9H0R4 259 aa18.67■□□□□ 0.58
SDF4-205ENST00000465727 MIEF1Q9NQG6 463 aa18.67■□□□□ 0.58
SDF4-205ENST00000465727 ASB6Q9NWX5 421 aa18.67■□□□□ 0.58
SDF4-205ENST00000465727 MARCH5Q9NX47 278 aa18.67■□□□□ 0.58
SDF4-205ENST00000465727 FBXW2Q9UKT8 454 aa18.67■□□□□ 0.58
SDF4-205ENST00000465727 CLCA2Q9UQC9 943 aa18.67■□□□□ 0.58
SDF4-205ENST00000465727 GBAP04062 536 aa18.66■□□□□ 0.58
SDF4-205ENST00000465727 MMP11P24347 488 aa18.66■□□□□ 0.58
SDF4-205ENST00000465727 CTBP2P56545 445 aa18.66■□□□□ 0.58
SDF4-205ENST00000465727 SNRPD1P62314 119 aaKnown RBP18.66■□□□□ 0.58
SDF4-205ENST00000465727 CLLU1Q5K131 121 aa18.66■□□□□ 0.58
SDF4-205ENST00000465727 C1orf94Q6P1W5 598 aa18.66■□□□□ 0.58
SDF4-205ENST00000465727 PODNL1Q6PEZ8 512 aa18.66■□□□□ 0.58
SDF4-205ENST00000465727 LUZP2Q86TE4 346 aa18.66■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms