RNA–Protein interactions for RNA: ENST00000463487.1

COL9A3-204, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 5

Gene COL9A3, Length 760 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-204ENST00000463487 IFI6P09912 130 aa18.38■□□□□ 0.53
COL9A3-204ENST00000463487 SSTR4P31391 388 aa18.38■□□□□ 0.53
COL9A3-204ENST00000463487 MDH1P40925 334 aaKnown RBP18.38■□□□□ 0.53
COL9A3-204ENST00000463487 SSR4P51571 173 aa18.38■□□□□ 0.53
COL9A3-204ENST00000463487 AQP5P55064 265 aa18.38■□□□□ 0.53
COL9A3-204ENST00000463487 MANFP55145 182 aaKnown RBP18.38■□□□□ 0.53
COL9A3-204ENST00000463487 STX1BP61266 288 aa18.38■□□□□ 0.53
COL9A3-204ENST00000463487 LTB4RQ15722 352 aa18.38■□□□□ 0.53
COL9A3-204ENST00000463487 SLC9B1Q4ZJI4 515 aa18.38■□□□□ 0.53
COL9A3-204ENST00000463487 SOWAHCQ53LP3 525 aaPredicted RBP18.38■□□□□ 0.53
COL9A3-204ENST00000463487 ZNF628Q5EBL2 1059 aa18.38■□□□□ 0.53
COL9A3-204ENST00000463487 ANKRD26P1Q6NSI1 321 aa18.38■□□□□ 0.53
COL9A3-204ENST00000463487 GPALPP1Q8IXQ4 340 aa18.38■□□□□ 0.53
COL9A3-204ENST00000463487 ZNF321PQ8N8H1 164 aa18.38■□□□□ 0.53
COL9A3-204ENST00000463487 CTHRC1Q96CG8 243 aa18.38■□□□□ 0.53
COL9A3-204ENST00000463487 BBC3Q96PG8 261 aaPredicted RBP18.38■□□□□ 0.53
COL9A3-204ENST00000463487 BHLHE41Q9C0J9 482 aaPredicted RBP18.38■□□□□ 0.53
COL9A3-204ENST00000463487 CCDC134Q9H6E4 229 aa18.38■□□□□ 0.53
COL9A3-204ENST00000463487 DDX18Q9NVP1 670 aaKnown RBP18.38■□□□□ 0.53
COL9A3-204ENST00000463487 AIG1Q9NVV5 245 aa18.38■□□□□ 0.53
COL9A3-204ENST00000463487 A0A087WV62 115 aa18.37■□□□□ 0.53
COL9A3-204ENST00000463487 TRAV17A0A0B4J275 112 aa18.37■□□□□ 0.53
COL9A3-204ENST00000463487 C2orf92A0A1B0GVN3 265 aa18.37■□□□□ 0.53
COL9A3-204ENST00000463487 HRKO00198 91 aa18.37■□□□□ 0.53
COL9A3-204ENST00000463487 ZNF195O14628 629 aa18.37■□□□□ 0.53
COL9A3-204ENST00000463487 UBDO15205 165 aa18.37■□□□□ 0.53
COL9A3-204ENST00000463487 WDPCPO95876 746 aa18.37■□□□□ 0.53
COL9A3-204ENST00000463487 CT62P0C5K7 136 aa18.37■□□□□ 0.53
COL9A3-204ENST00000463487 CYB561P49447 251 aa18.37■□□□□ 0.53
COL9A3-204ENST00000463487 IRX1P78414 480 aaPredicted RBP18.37■□□□□ 0.53
COL9A3-204ENST00000463487 GUCY1A3Q02108 690 aa18.37■□□□□ 0.53
COL9A3-204ENST00000463487 SRSF11Q05519 484 aaKnown RBP18.37■□□□□ 0.53
COL9A3-204ENST00000463487 HSPB3Q12988 150 aa18.37■□□□□ 0.53
COL9A3-204ENST00000463487 MPEG1Q2M385 716 aa18.37■□□□□ 0.53
COL9A3-204ENST00000463487 LSM12Q3MHD2 195 aaKnown RBP18.37■□□□□ 0.53
COL9A3-204ENST00000463487 FAM111BQ6SJ93 734 aa18.37■□□□□ 0.53
COL9A3-204ENST00000463487 MAVSQ7Z434 540 aa18.37■□□□□ 0.53
COL9A3-204ENST00000463487 CAMKMTQ7Z624 323 aa18.37■□□□□ 0.53
COL9A3-204ENST00000463487 C9orf40Q8IXQ3 194 aa18.37■□□□□ 0.53
COL9A3-204ENST00000463487 TAGAPQ8N103 731 aa18.37■□□□□ 0.53
COL9A3-204ENST00000463487 VPS37AQ8NEZ2 397 aa18.37■□□□□ 0.53
COL9A3-204ENST00000463487 DOK4Q8TEW6 326 aa18.37■□□□□ 0.53
COL9A3-204ENST00000463487 STON2Q8WXE9 905 aa18.37■□□□□ 0.53
COL9A3-204ENST00000463487 ASB15Q8WXK1 588 aa18.37■□□□□ 0.53
COL9A3-204ENST00000463487 PNPLA2Q96AD5 504 aa18.37■□□□□ 0.53
COL9A3-204ENST00000463487 CCDC28BQ9BUN5 200 aa18.37■□□□□ 0.53
COL9A3-204ENST00000463487 WWTR1Q9GZV5 400 aa18.37■□□□□ 0.53
COL9A3-204ENST00000463487 GLIPR2Q9H4G4 154 aa18.37■□□□□ 0.53
COL9A3-204ENST00000463487 ZBTB20Q9HC78 741 aaPredicted RBP18.37■□□□□ 0.53
COL9A3-204ENST00000463487 TAS2R9Q9NYW1 312 aa18.37■□□□□ 0.53
COL9A3-204ENST00000463487 ZNF639Q9UID6 485 aa18.37■□□□□ 0.53
COL9A3-204ENST00000463487 CPAMD8Q8IZJ3 1885 aa18.37■□□□□ 0.53
COL9A3-204ENST00000463487 TNRC6AQ8NDV7 1962 aaKnown RBP18.37■□□□□ 0.53
COL9A3-204ENST00000463487 PLOD2O00469 737 aa18.36■□□□□ 0.53
COL9A3-204ENST00000463487 PLOD3O60568 738 aa18.36■□□□□ 0.53
COL9A3-204ENST00000463487 OR2J2O76002 312 aa18.36■□□□□ 0.53
COL9A3-204ENST00000463487 FRKP42685 505 aaPredicted RBP18.36■□□□□ 0.53
COL9A3-204ENST00000463487 IDH3AP50213 366 aa18.36■□□□□ 0.53
COL9A3-204ENST00000463487 NRG3P56975 720 aa18.36■□□□□ 0.53
COL9A3-204ENST00000463487 DCAF7P61962 342 aa18.36■□□□□ 0.53
COL9A3-204ENST00000463487 MRPS35P82673 323 aaKnown RBP18.36■□□□□ 0.53
COL9A3-204ENST00000463487 DUSP2Q05923 314 aa18.36■□□□□ 0.53
COL9A3-204ENST00000463487 ZNF169Q14929 603 aaPredicted RBP18.36■□□□□ 0.53
COL9A3-204ENST00000463487 MLC1Q15049 377 aa18.36■□□□□ 0.53
COL9A3-204ENST00000463487 EBPQ15125 230 aaKnown RBP18.36■□□□□ 0.53
COL9A3-204ENST00000463487 PGS1Q32NB8 556 aa18.36■□□□□ 0.53
COL9A3-204ENST00000463487 SLC6A19Q695T7 634 aa18.36■□□□□ 0.53
COL9A3-204ENST00000463487 OPN5Q6U736 354 aa18.36■□□□□ 0.53
COL9A3-204ENST00000463487 Q6ZS92 163 aa18.36■□□□□ 0.53
COL9A3-204ENST00000463487 PTRH1Q86Y79 214 aaKnown RBP18.36■□□□□ 0.53
COL9A3-204ENST00000463487 RIMKLAQ8IXN7 391 aa18.36■□□□□ 0.53
COL9A3-204ENST00000463487 DND1Q8IYX4 353 aaKnown RBP18.36■□□□□ 0.53
COL9A3-204ENST00000463487 SLC15A4Q8N697 577 aa18.36■□□□□ 0.53
COL9A3-204ENST00000463487 KRTCAP2Q8N6L1 136 aa18.36■□□□□ 0.53
COL9A3-204ENST00000463487 RBMXL3Q8N7X1 1067 aaKnown RBP18.36■□□□□ 0.53
COL9A3-204ENST00000463487 ZNF615Q8N8J6 731 aa18.36■□□□□ 0.53
COL9A3-204ENST00000463487 C17orf47Q8NEP4 570 aa18.36■□□□□ 0.53
COL9A3-204ENST00000463487 OR7A2PQ8NGA2 310 aa18.36■□□□□ 0.53
COL9A3-204ENST00000463487 OR52R1Q8NGF1 315 aa18.36■□□□□ 0.53
COL9A3-204ENST00000463487 KAT2AQ92830 837 aa18.36■□□□□ 0.53
COL9A3-204ENST00000463487 TP53INP1Q96A56 240 aa18.36■□□□□ 0.53
COL9A3-204ENST00000463487 TMEM125Q96AQ2 219 aa18.36■□□□□ 0.53
COL9A3-204ENST00000463487 CIDECQ96AQ7 238 aaPredicted RBP18.36■□□□□ 0.53
COL9A3-204ENST00000463487 TESCQ96BS2 214 aa18.36■□□□□ 0.53
COL9A3-204ENST00000463487 COQ8BQ96D53 544 aa18.36■□□□□ 0.53
COL9A3-204ENST00000463487 DUSP26Q9BV47 211 aa18.36■□□□□ 0.53
COL9A3-204ENST00000463487 C3orf14Q9HBI5 128 aa18.36■□□□□ 0.53
COL9A3-204ENST00000463487 NEUROD4Q9HD90 331 aa18.36■□□□□ 0.53
COL9A3-204ENST00000463487 NPHS2Q9NP85 383 aa18.36■□□□□ 0.53
COL9A3-204ENST00000463487 SLAMF7Q9NQ25 335 aa18.36■□□□□ 0.53
COL9A3-204ENST00000463487 ATMQ13315 3056 aa18.36■□□□□ 0.53
COL9A3-204ENST00000463487 A0A1W2PRB8 838 aa18.35■□□□□ 0.53
COL9A3-204ENST00000463487 A8MVJ9 347 aa18.35■□□□□ 0.53
COL9A3-204ENST00000463487 CAPN14A8MX76 684 aa18.35■□□□□ 0.53
COL9A3-204ENST00000463487 E9PBE3 544 aa18.35■□□□□ 0.53
COL9A3-204ENST00000463487 WWP2O00308 870 aa18.35■□□□□ 0.53
COL9A3-204ENST00000463487 PRKNO60260 465 aaPredicted RBP18.35■□□□□ 0.53
COL9A3-204ENST00000463487 ALDOCP09972 364 aaKnown RBP18.35■□□□□ 0.53
COL9A3-204ENST00000463487 TRHRP34981 398 aaPredicted RBP18.35■□□□□ 0.53
COL9A3-204ENST00000463487 KIR3DL1P43629 444 aa18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms