RNA–Protein interactions for RNA: ENST00000462658.1

UBE4B-204, Transcript of ubiquitination factor E4B, humanhuman

TSL 3

Gene UBE4B, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-204ENST00000462658 CPSF7Q8N684 471 aaKnown RBP6.97□□□□□ -1.29
UBE4B-204ENST00000462658 SIRT6Q8N6T7 355 aa6.97□□□□□ -1.29
UBE4B-204ENST00000462658 VPS37AQ8NEZ2 397 aa6.97□□□□□ -1.29
UBE4B-204ENST00000462658 ABHD11Q8NFV4 315 aa6.97□□□□□ -1.29
UBE4B-204ENST00000462658 OR52E1Q8NGJ3 308 aa6.97□□□□□ -1.29
UBE4B-204ENST00000462658 OR2T11Q8NH01 316 aa6.97□□□□□ -1.29
UBE4B-204ENST00000462658 SMPDL3AQ92484 453 aa6.97□□□□□ -1.29
UBE4B-204ENST00000462658 NEIL2Q969S2 332 aa6.97□□□□□ -1.29
UBE4B-204ENST00000462658 SH3KBP1Q96B97 665 aa6.97□□□□□ -1.29
UBE4B-204ENST00000462658 ZG16BQ96DA0 208 aa6.97□□□□□ -1.29
UBE4B-204ENST00000462658 CXorf40BQ96DE9 158 aa6.97□□□□□ -1.29
UBE4B-204ENST00000462658 ZDHHC12Q96GR4 267 aa6.97□□□□□ -1.29
UBE4B-204ENST00000462658 MARK4Q96L34 752 aa6.97□□□□□ -1.29
UBE4B-204ENST00000462658 NRTNQ99748 197 aa6.97□□□□□ -1.29
UBE4B-204ENST00000462658 HAUS8Q9BT25 410 aa6.97□□□□□ -1.29
UBE4B-204ENST00000462658 RAB11FIP5Q9BXF6 653 aa6.97□□□□□ -1.29
UBE4B-204ENST00000462658 ELOVL6Q9H5J4 265 aa6.97□□□□□ -1.29
UBE4B-204ENST00000462658 XKR8Q9H6D3 395 aa6.97□□□□□ -1.29
UBE4B-204ENST00000462658 KIR3DX1Q9H7L2 352 aa6.97□□□□□ -1.29
UBE4B-204ENST00000462658 TXLNGQ9NUQ3 528 aa6.97□□□□□ -1.29
UBE4B-204ENST00000462658 TAAR2Q9P1P5 351 aa6.97□□□□□ -1.29
UBE4B-204ENST00000462658 ZNF624Q9P2J8 865 aaPredicted RBP6.97□□□□□ -1.29
UBE4B-204ENST00000462658 GIMAP2Q9UG22 337 aa6.97□□□□□ -1.29
UBE4B-204ENST00000462658 APOBEC3BQ9UH17 382 aaKnown RBP6.97□□□□□ -1.29
UBE4B-204ENST00000462658 ZNF490Q9ULM2 529 aaPredicted RBP6.97□□□□□ -1.29
UBE4B-204ENST00000462658 SLC12A4Q9UP95 1085 aa6.97□□□□□ -1.29
UBE4B-204ENST00000462658 RIF1Q5UIP0 2472 aaKnown RBP6.96□□□□□ -1.29
UBE4B-204ENST00000462658 ZNF292O60281 2723 aa6.96□□□□□ -1.29
UBE4B-204ENST00000462658 ANKRD12Q6UB98 2062 aa6.96□□□□□ -1.29
UBE4B-204ENST00000462658 ZFHX2Q9C0A1 2572 aaPredicted RBP6.96□□□□□ -1.29
UBE4B-204ENST00000462658 GVINP1Q7Z2Y8 2422 aa6.96□□□□□ -1.3
UBE4B-204ENST00000462658 A0A1W2PPV9 198 aa6.96□□□□□ -1.3
UBE4B-204ENST00000462658 OR5K4A6NMS3 321 aa6.96□□□□□ -1.3
UBE4B-204ENST00000462658 VILLO15195 856 aa6.96□□□□□ -1.3
UBE4B-204ENST00000462658 SLC22A2O15244 555 aa6.96□□□□□ -1.3
UBE4B-204ENST00000462658 BCAT2O15382 392 aaPredicted RBP6.96□□□□□ -1.3
UBE4B-204ENST00000462658 HNRNPCL1O60812 293 aaKnown RBP6.96□□□□□ -1.3
UBE4B-204ENST00000462658 PDYNP01213 254 aa6.96□□□□□ -1.3
UBE4B-204ENST00000462658 CSF2P04141 144 aa6.96□□□□□ -1.3
UBE4B-204ENST00000462658 PRR35P0CG20 571 aa6.96□□□□□ -1.3
UBE4B-204ENST00000462658 C1GALT1C1LP0DN25 315 aa6.96□□□□□ -1.3
UBE4B-204ENST00000462658 CD22P20273 847 aa6.96□□□□□ -1.3
UBE4B-204ENST00000462658 CALB2P22676 271 aa6.96□□□□□ -1.3
UBE4B-204ENST00000462658 PIK3R1P27986 724 aa6.96□□□□□ -1.3
UBE4B-204ENST00000462658 PRDX6P30041 224 aa6.96□□□□□ -1.3
UBE4B-204ENST00000462658 PKLRP30613 574 aa6.96□□□□□ -1.3
UBE4B-204ENST00000462658 CSNK1EP49674 416 aaKnown RBP6.96□□□□□ -1.3
UBE4B-204ENST00000462658 RAB28P51157 221 aa6.96□□□□□ -1.3
UBE4B-204ENST00000462658 C21orf59P57076 290 aa6.96□□□□□ -1.3
UBE4B-204ENST00000462658 NHLH1Q02575 133 aa6.96□□□□□ -1.3
UBE4B-204ENST00000462658 HIST2H2ACQ16777 129 aaPredicted RBP6.96□□□□□ -1.3
UBE4B-204ENST00000462658 IMPG1Q17R60 797 aa6.96□□□□□ -1.3
UBE4B-204ENST00000462658 TBC1D25Q3MII6 688 aa6.96□□□□□ -1.3
UBE4B-204ENST00000462658 ATP6AP1LQ52LC2 224 aa6.96□□□□□ -1.3
UBE4B-204ENST00000462658 C6orf136Q5SQH8 315 aa6.96□□□□□ -1.3
UBE4B-204ENST00000462658 FRG2Q64ET8 278 aa6.96□□□□□ -1.3
UBE4B-204ENST00000462658 ATG9BQ674R7 924 aa6.96□□□□□ -1.3
UBE4B-204ENST00000462658 HIST2H2AA3Q6FI13 130 aa6.96□□□□□ -1.3
UBE4B-204ENST00000462658 GRHL2Q6ISB3 625 aa6.96□□□□□ -1.3
UBE4B-204ENST00000462658 IYDQ6PHW0 289 aa6.96□□□□□ -1.3
UBE4B-204ENST00000462658 SLC29A4Q7RTT9 530 aa6.96□□□□□ -1.3
UBE4B-204ENST00000462658 TMPRSS11BQ86T26 416 aa6.96□□□□□ -1.3
UBE4B-204ENST00000462658 C17orf64Q86WR6 236 aa6.96□□□□□ -1.3
UBE4B-204ENST00000462658 SFRP1Q8N474 314 aa6.96□□□□□ -1.3
UBE4B-204ENST00000462658 LINC01555Q8NAE3 123 aa6.96□□□□□ -1.3
UBE4B-204ENST00000462658 OR2L8Q8NGY9 312 aa6.96□□□□□ -1.3
UBE4B-204ENST00000462658 MBD3L2Q8NHZ7 208 aaPredicted RBP6.96□□□□□ -1.3
UBE4B-204ENST00000462658 HMGCLL1Q8TB92 370 aa6.96□□□□□ -1.3
UBE4B-204ENST00000462658 ZFPM2Q8WW38 1151 aa6.96□□□□□ -1.3
UBE4B-204ENST00000462658 SLC5A11Q8WWX8 675 aa6.96□□□□□ -1.3
UBE4B-204ENST00000462658 SELENOMQ8WWX9 145 aa6.96□□□□□ -1.3
UBE4B-204ENST00000462658 WDR34Q96EX3 536 aa6.96□□□□□ -1.3
UBE4B-204ENST00000462658 PPP3R2Q96LZ3 170 aa6.96□□□□□ -1.3
UBE4B-204ENST00000462658 BBC3Q96PG8 261 aaPredicted RBP6.96□□□□□ -1.3
UBE4B-204ENST00000462658 FRG2BQ96QU4 278 aa6.96□□□□□ -1.3
UBE4B-204ENST00000462658 HBEGFQ99075 208 aa6.96□□□□□ -1.3
UBE4B-204ENST00000462658 THAP7Q9BT49 309 aaPredicted RBP6.96□□□□□ -1.3
UBE4B-204ENST00000462658 EFCAB11Q9BUY7 163 aa6.96□□□□□ -1.3
UBE4B-204ENST00000462658 ACAT2Q9BWD1 397 aa6.96□□□□□ -1.3
UBE4B-204ENST00000462658 PCBD2Q9H0N5 130 aa6.96□□□□□ -1.3
UBE4B-204ENST00000462658 EHD1Q9H4M9 534 aa6.96□□□□□ -1.3
UBE4B-204ENST00000462658 ZNF385DQ9H6B1 395 aa6.96□□□□□ -1.3
UBE4B-204ENST00000462658 ACTR5Q9H9F9 607 aaPredicted RBP6.96□□□□□ -1.3
UBE4B-204ENST00000462658 FARSBQ9NSD9 589 aaKnown RBP6.96□□□□□ -1.3
UBE4B-204ENST00000462658 MRGBPQ9NV56 204 aa6.96□□□□□ -1.3
UBE4B-204ENST00000462658 SH3BP4Q9P0V3 963 aa6.96□□□□□ -1.3
UBE4B-204ENST00000462658 C11orf21Q9P2W6 132 aa6.96□□□□□ -1.3
UBE4B-204ENST00000462658 NKX1-2Q9UD57 310 aaPredicted RBP6.96□□□□□ -1.3
UBE4B-204ENST00000462658 TAC3Q9UHF0 121 aa6.96□□□□□ -1.3
UBE4B-204ENST00000462658 ICKQ9UPZ9 632 aa6.96□□□□□ -1.3
UBE4B-204ENST00000462658 CCL27Q9Y4X3 112 aa6.96□□□□□ -1.3
UBE4B-204ENST00000462658 COPG1Q9Y678 874 aaKnown RBP6.96□□□□□ -1.3
UBE4B-204ENST00000462658 CAPN7Q9Y6W3 813 aa6.96□□□□□ -1.3
UBE4B-204ENST00000462658 DMXL1Q9Y485 3027 aa6.95□□□□□ -1.3
UBE4B-204ENST00000462658 FAM186AA6NE01 2351 aa6.95□□□□□ -1.3
UBE4B-204ENST00000462658 KIR2DS5A0A0G2JLQ3 304 aa6.95□□□□□ -1.3
UBE4B-204ENST00000462658 A0A0G2JNG1 304 aa6.95□□□□□ -1.3
UBE4B-204ENST00000462658 LOC100653049A0A140TA62 436 aa6.95□□□□□ -1.3
UBE4B-204ENST00000462658 H0YIV9 168 aa6.95□□□□□ -1.3
UBE4B-204ENST00000462658 KIR2DS3K7RE56 304 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms