RNA–Protein interactions for RNA: ENST00000462258.1

SF3A3-204, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 2

Gene SF3A3, Length 527 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-204ENST00000462258 IL3P08700 152 aa9.37□□□□□ -0.91
SF3A3-204ENST00000462258 CSNK2A2P19784 350 aaPredicted RBP9.37□□□□□ -0.91
SF3A3-204ENST00000462258 AGAP20933 346 aa9.37□□□□□ -0.91
SF3A3-204ENST00000462258 GPX3P22352 226 aa9.37□□□□□ -0.91
SF3A3-204ENST00000462258 GRNP28799 593 aaKnown RBP9.37□□□□□ -0.91
SF3A3-204ENST00000462258 SERPINB3P29508 390 aa9.37□□□□□ -0.91
SF3A3-204ENST00000462258 TIA1P31483 386 aaKnown RBP eCLIP9.37□□□□□ -0.91
SF3A3-204ENST00000462258 CRHR1P34998 444 aa9.37□□□□□ -0.91
SF3A3-204ENST00000462258 PIGAP37287 484 aa9.37□□□□□ -0.91
SF3A3-204ENST00000462258 FEN1P39748 380 aaKnown RBP9.37□□□□□ -0.91
SF3A3-204ENST00000462258 CCT5P48643 541 aa9.37□□□□□ -0.91
SF3A3-204ENST00000462258 TMED10P49755 219 aaKnown RBP9.37□□□□□ -0.91
SF3A3-204ENST00000462258 NR0B1P51843 470 aaKnown RBP9.37□□□□□ -0.91
SF3A3-204ENST00000462258 FOXA1P55317 472 aa9.37□□□□□ -0.91
SF3A3-204ENST00000462258 NAA20P61599 178 aa9.37□□□□□ -0.91
SF3A3-204ENST00000462258 DUSP2Q05923 314 aa9.37□□□□□ -0.91
SF3A3-204ENST00000462258 ACSM2AQ08AH3 577 aa9.37□□□□□ -0.91
SF3A3-204ENST00000462258 FOXO1Q12778 655 aa9.37□□□□□ -0.91
SF3A3-204ENST00000462258 NTRK2Q16620 822 aa9.37□□□□□ -0.91
SF3A3-204ENST00000462258 HYAL4Q2M3T9 481 aa9.37□□□□□ -0.91
SF3A3-204ENST00000462258 PRICKLE4Q2TBC4 344 aa9.37□□□□□ -0.91
SF3A3-204ENST00000462258 SLC22A10Q63ZE4 541 aa9.37□□□□□ -0.91
SF3A3-204ENST00000462258 ACSM2BQ68CK6 577 aa9.37□□□□□ -0.91
SF3A3-204ENST00000462258 XKRXQ6PP77 449 aa9.37□□□□□ -0.91
SF3A3-204ENST00000462258 SH2D5Q6ZV89 423 aa9.37□□□□□ -0.91
SF3A3-204ENST00000462258 SLC34A3Q8N130 599 aa9.37□□□□□ -0.91
SF3A3-204ENST00000462258 C4orf33Q8N1A6 199 aa9.37□□□□□ -0.91
SF3A3-204ENST00000462258 LRRC25Q8N386 305 aaPredicted RBP9.37□□□□□ -0.91
SF3A3-204ENST00000462258 ZNF615Q8N8J6 731 aa9.37□□□□□ -0.91
SF3A3-204ENST00000462258 OR7G1Q8NGA0 311 aa9.37□□□□□ -0.91
SF3A3-204ENST00000462258 OR5M3Q8NGP4 307 aa9.37□□□□□ -0.91
SF3A3-204ENST00000462258 CHTF18Q8WVB6 975 aa9.37□□□□□ -0.91
SF3A3-204ENST00000462258 APIPQ96GX9 242 aa9.37□□□□□ -0.91
SF3A3-204ENST00000462258 SMC6Q96SB8 1091 aa9.37□□□□□ -0.91
SF3A3-204ENST00000462258 DMRTA2Q96SC8 542 aa9.37□□□□□ -0.91
SF3A3-204ENST00000462258 VKORC1Q9BQB6 163 aa9.37□□□□□ -0.91
SF3A3-204ENST00000462258 EBPLQ9BY08 206 aa9.37□□□□□ -0.91
SF3A3-204ENST00000462258 PFDN4Q9NQP4 134 aa9.37□□□□□ -0.91
SF3A3-204ENST00000462258 MAT2BQ9NZL9 334 aa9.37□□□□□ -0.91
SF3A3-204ENST00000462258 UTS2RQ9UKP6 389 aa9.37□□□□□ -0.91
SF3A3-204ENST00000462258 BOKQ9UMX3 212 aaPredicted RBP9.37□□□□□ -0.91
SF3A3-204ENST00000462258 DTX4Q9Y2E6 619 aa9.37□□□□□ -0.91
SF3A3-204ENST00000462258 TIMM22Q9Y584 194 aa9.37□□□□□ -0.91
SF3A3-204ENST00000462258 CHCHD2Q9Y6H1 151 aaPredicted RBP9.37□□□□□ -0.91
SF3A3-204ENST00000462258 ZNF780BQ9Y6R6 833 aa9.37□□□□□ -0.91
SF3A3-204ENST00000462258 PHF3Q92576 2039 aaKnown RBP9.37□□□□□ -0.91
SF3A3-204ENST00000462258 CSMD1Q96PZ7 3565 aa9.36□□□□□ -0.91
SF3A3-204ENST00000462258 LRRC3CA6NJW4 275 aa9.36□□□□□ -0.91
SF3A3-204ENST00000462258 CAPN14A8MX76 684 aa9.36□□□□□ -0.91
SF3A3-204ENST00000462258 H3BQF6 201 aa9.36□□□□□ -0.91
SF3A3-204ENST00000462258 UBFD1O14562 309 aaKnown RBP9.36□□□□□ -0.91
SF3A3-204ENST00000462258 ADAM10O14672 748 aa9.36□□□□□ -0.91
SF3A3-204ENST00000462258 HNRNPRO43390 633 aaKnown RBP9.36□□□□□ -0.91
SF3A3-204ENST00000462258 CRCPO75575 148 aa9.36□□□□□ -0.91
SF3A3-204ENST00000462258 CLDN14O95500 239 aa9.36□□□□□ -0.91
SF3A3-204ENST00000462258 IGHG3P01860 377 aa9.36□□□□□ -0.91
SF3A3-204ENST00000462258 CELA3AP09093 270 aa9.36□□□□□ -0.91
SF3A3-204ENST00000462258 KRT4P19013 534 aa9.36□□□□□ -0.91
SF3A3-204ENST00000462258 HTR1EP28566 365 aa9.36□□□□□ -0.91
SF3A3-204ENST00000462258 NAGLUP54802 743 aa9.36□□□□□ -0.91
SF3A3-204ENST00000462258 NRG3P56975 720 aa9.36□□□□□ -0.91
SF3A3-204ENST00000462258 FBXW4P57775 412 aa9.36□□□□□ -0.91
SF3A3-204ENST00000462258 DNAJB13P59910 316 aa9.36□□□□□ -0.91
SF3A3-204ENST00000462258 VSNL1P62760 191 aa9.36□□□□□ -0.91
SF3A3-204ENST00000462258 RAE1P78406 368 aaKnown RBP9.36□□□□□ -0.91
SF3A3-204ENST00000462258 LTB4RQ15722 352 aa9.36□□□□□ -0.91
SF3A3-204ENST00000462258 NNATQ16517 81 aa9.36□□□□□ -0.91
SF3A3-204ENST00000462258 IMPG1Q17R60 797 aa9.36□□□□□ -0.91
SF3A3-204ENST00000462258 CFAP157Q5JU67 520 aa9.36□□□□□ -0.91
SF3A3-204ENST00000462258 LIPMQ5VYY2 423 aa9.36□□□□□ -0.91
SF3A3-204ENST00000462258 FAM180BQ6P0A1 224 aa9.36□□□□□ -0.91
SF3A3-204ENST00000462258 FAM111BQ6SJ93 734 aa9.36□□□□□ -0.91
SF3A3-204ENST00000462258 SCIMPQ6UWF3 145 aa9.36□□□□□ -0.91
SF3A3-204ENST00000462258 TMEM64Q6YI46 380 aa9.36□□□□□ -0.91
SF3A3-204ENST00000462258 C17orf47Q8NEP4 570 aa9.36□□□□□ -0.91
SF3A3-204ENST00000462258 OR2W6PQ8NHA6 318 aa9.36□□□□□ -0.91
SF3A3-204ENST00000462258 CDC26Q8NHZ8 85 aa9.36□□□□□ -0.91
SF3A3-204ENST00000462258 ADIPOR1Q96A54 375 aa9.36□□□□□ -0.91
SF3A3-204ENST00000462258 TP53INP1Q96A56 240 aa9.36□□□□□ -0.91
SF3A3-204ENST00000462258 MARVELD3Q96A59 401 aa9.36□□□□□ -0.91
SF3A3-204ENST00000462258 EXOSC8Q96B26 276 aaKnown RBP9.36□□□□□ -0.91
SF3A3-204ENST00000462258 CNRIP1Q96F85 164 aaPredicted RBP9.36□□□□□ -0.91
SF3A3-204ENST00000462258 APOPT1Q96IL0 206 aa9.36□□□□□ -0.91
SF3A3-204ENST00000462258 ZNF597Q96LX8 424 aa9.36□□□□□ -0.91
SF3A3-204ENST00000462258 DOHHQ9BU89 302 aa9.36□□□□□ -0.91
SF3A3-204ENST00000462258 ITPAQ9BY32 194 aa9.36□□□□□ -0.91
SF3A3-204ENST00000462258 TP63Q9H3D4 680 aaPredicted RBP9.36□□□□□ -0.91
SF3A3-204ENST00000462258 C12orf65Q9H3J6 166 aaKnown RBP9.36□□□□□ -0.91
SF3A3-204ENST00000462258 CNIH4Q9P003 139 aa9.36□□□□□ -0.91
SF3A3-204ENST00000462258 HEY2Q9UBP5 337 aa9.36□□□□□ -0.91
SF3A3-204ENST00000462258 BCAP29Q9UHQ4 241 aa9.36□□□□□ -0.91
SF3A3-204ENST00000462258 MID2Q9UJV3 735 aa9.36□□□□□ -0.91
SF3A3-204ENST00000462258 CNOT11Q9UKZ1 510 aaKnown RBP9.36□□□□□ -0.91
SF3A3-204ENST00000462258 PSME2Q9UL46 239 aa9.36□□□□□ -0.91
SF3A3-204ENST00000462258 GRID1Q9ULK0 1009 aa9.36□□□□□ -0.91
SF3A3-204ENST00000462258 CFL2Q9Y281 166 aa9.36□□□□□ -0.91
SF3A3-204ENST00000462258 DLGAP4Q9Y2H0 992 aa9.36□□□□□ -0.91
SF3A3-204ENST00000462258 SEC23IPQ9Y6Y8 1000 aaKnown RBP9.36□□□□□ -0.91
SF3A3-204ENST00000462258 CACNA1DQ01668 2161 aa9.36□□□□□ -0.91
SF3A3-204ENST00000462258 ATP6AP2A0A1C7CYW4 349 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms