RNA–Protein interactions for RNA: ENST00000462236.1

COPS3-204, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 551 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-204ENST00000462236 BCL2L1Q07817 233 aa4.52□□□□□ -1.69
COPS3-204ENST00000462236 GAGE1Q13065 139 aa4.52□□□□□ -1.69
COPS3-204ENST00000462236 GAGE4Q13068 117 aa4.52□□□□□ -1.69
COPS3-204ENST00000462236 FRG1Q14331 258 aaKnown RBP4.52□□□□□ -1.69
COPS3-204ENST00000462236 HNF4GQ14541 408 aa4.52□□□□□ -1.69
COPS3-204ENST00000462236 C2CD6Q53TS8 623 aa4.52□□□□□ -1.69
COPS3-204ENST00000462236 ZNF789Q5FWF6 425 aa4.52□□□□□ -1.69
COPS3-204ENST00000462236 CXorf66Q5JRM2 361 aaPredicted RBP4.52□□□□□ -1.69
COPS3-204ENST00000462236 FAM69BQ5VUD6 431 aa4.52□□□□□ -1.69
COPS3-204ENST00000462236 RPUSD3Q6P087 351 aaKnown RBP4.52□□□□□ -1.69
COPS3-204ENST00000462236 CYB5D1Q6P9G0 228 aa4.52□□□□□ -1.69
COPS3-204ENST00000462236 DOK6Q6PKX4 331 aa4.52□□□□□ -1.69
COPS3-204ENST00000462236 WASH2PQ6VEQ5 465 aa4.52□□□□□ -1.69
COPS3-204ENST00000462236 CERS6Q6ZMG9 384 aa4.52□□□□□ -1.69
COPS3-204ENST00000462236 C9orf47Q6ZRZ4 202 aa4.52□□□□□ -1.69
COPS3-204ENST00000462236 IKBIPQ70UQ0 350 aa4.52□□□□□ -1.69
COPS3-204ENST00000462236 SHFQ7M4L6 423 aa4.52□□□□□ -1.69
COPS3-204ENST00000462236 FJX1Q86VR8 437 aa4.52□□□□□ -1.69
COPS3-204ENST00000462236 KMT5CQ86Y97 462 aa4.52□□□□□ -1.69
COPS3-204ENST00000462236 GALNT13Q8IUC8 556 aa4.52□□□□□ -1.69
COPS3-204ENST00000462236 EMC1Q8N766 993 aa4.52□□□□□ -1.69
COPS3-204ENST00000462236 PRR26Q8N8Z3 221 aa4.52□□□□□ -1.69
COPS3-204ENST00000462236 TMEM35BQ8NCS4 154 aa4.52□□□□□ -1.69
COPS3-204ENST00000462236 OR8K5Q8NH50 307 aa4.52□□□□□ -1.69
COPS3-204ENST00000462236 ARRDC2Q8TBH0 407 aa4.52□□□□□ -1.69
COPS3-204ENST00000462236 MAGEC3Q8TD91 643 aa4.52□□□□□ -1.69
COPS3-204ENST00000462236 GRHL3Q8TE85 626 aa4.52□□□□□ -1.69
COPS3-204ENST00000462236 PPP4R1Q8TF05 950 aa4.52□□□□□ -1.69
COPS3-204ENST00000462236 FAM216AQ8WUB2 273 aa4.52□□□□□ -1.69
COPS3-204ENST00000462236 PIH1D2Q8WWB5 315 aa4.52□□□□□ -1.69
COPS3-204ENST00000462236 RXFP2Q8WXD0 754 aa4.52□□□□□ -1.69
COPS3-204ENST00000462236 SNX21Q969T3 373 aa4.52□□□□□ -1.69
COPS3-204ENST00000462236 HDAC11Q96DB2 347 aa4.52□□□□□ -1.69
COPS3-204ENST00000462236 PGAM5Q96HS1 289 aa4.52□□□□□ -1.69
COPS3-204ENST00000462236 ELMO2Q96JJ3 720 aa4.52□□□□□ -1.69
COPS3-204ENST00000462236 ZNF514Q96K75 400 aaPredicted RBP4.52□□□□□ -1.69
COPS3-204ENST00000462236 TGM7Q96PF1 710 aa4.52□□□□□ -1.69
COPS3-204ENST00000462236 PSKH2Q96QS6 385 aa4.52□□□□□ -1.69
COPS3-204ENST00000462236 PDE7BQ9NP56 450 aa4.52□□□□□ -1.69
COPS3-204ENST00000462236 SLC40A1Q9NP59 571 aa4.52□□□□□ -1.69
COPS3-204ENST00000462236 MKKSQ9NPJ1 570 aaPredicted RBP4.52□□□□□ -1.69
COPS3-204ENST00000462236 AGPAT4Q9NRZ5 378 aa4.52□□□□□ -1.69
COPS3-204ENST00000462236 FGF21Q9NSA1 209 aa4.52□□□□□ -1.69
COPS3-204ENST00000462236 CNOT8Q9UFF9 292 aaKnown RBP4.52□□□□□ -1.69
COPS3-204ENST00000462236 CFAP45Q9UL16 551 aa4.52□□□□□ -1.69
COPS3-204ENST00000462236 KCNK6Q9Y257 313 aa4.52□□□□□ -1.69
COPS3-204ENST00000462236 DOCK7Q96N67 2140 aa4.51□□□□□ -1.69
COPS3-204ENST00000462236 A6NL46 340 aa4.51□□□□□ -1.69
COPS3-204ENST00000462236 A8MZ25 164 aa4.51□□□□□ -1.69
COPS3-204ENST00000462236 INAFM1C9JVW0 142 aa4.51□□□□□ -1.69
COPS3-204ENST00000462236 H3BMH7 237 aa4.51□□□□□ -1.69
COPS3-204ENST00000462236 C19orf84I3L1E1 186 aa4.51□□□□□ -1.69
COPS3-204ENST00000462236 KLHL41O60662 606 aa4.51□□□□□ -1.69
COPS3-204ENST00000462236 PGLSO95336 258 aa4.51□□□□□ -1.69
COPS3-204ENST00000462236 LSM8O95777 96 aaKnown RBP4.51□□□□□ -1.69
COPS3-204ENST00000462236 PNMA6AP0CW24 399 aaPredicted RBP4.51□□□□□ -1.69
COPS3-204ENST00000462236 COX6B1P14854 86 aa4.51□□□□□ -1.69
COPS3-204ENST00000462236 ZNF30P17039 623 aa4.51□□□□□ -1.69
COPS3-204ENST00000462236 ALOX12P18054 663 aa4.51□□□□□ -1.69
COPS3-204ENST00000462236 PON1P27169 355 aa4.51□□□□□ -1.69
COPS3-204ENST00000462236 HNRNPH1P31943 449 aaKnown RBP4.51□□□□□ -1.69
COPS3-204ENST00000462236 RPL3P39023 403 aaKnown RBP4.51□□□□□ -1.69
COPS3-204ENST00000462236 STC1P52823 247 aa4.51□□□□□ -1.69
COPS3-204ENST00000462236 GSDMDP57764 484 aa4.51□□□□□ -1.69
COPS3-204ENST00000462236 TUBB4BP68371 445 aa4.51□□□□□ -1.69
COPS3-204ENST00000462236 ABATP80404 500 aa4.51□□□□□ -1.69
COPS3-204ENST00000462236 ACY1Q03154 408 aa4.51□□□□□ -1.69
COPS3-204ENST00000462236 EGR4Q05215 589 aa4.51□□□□□ -1.69
COPS3-204ENST00000462236 ABRQ12979 859 aa4.51□□□□□ -1.69
COPS3-204ENST00000462236 PNOCQ13519 176 aa4.51□□□□□ -1.69
COPS3-204ENST00000462236 NAE1Q13564 534 aa4.51□□□□□ -1.69
COPS3-204ENST00000462236 TUBB2AQ13885 445 aa4.51□□□□□ -1.69
COPS3-204ENST00000462236 IHHQ14623 411 aa4.51□□□□□ -1.69
COPS3-204ENST00000462236 RFTN1Q14699 578 aaPredicted RBP4.51□□□□□ -1.69
COPS3-204ENST00000462236 CCDC40Q4G0X9 1142 aa4.51□□□□□ -1.69
COPS3-204ENST00000462236 CFAP58Q5T655 872 aa4.51□□□□□ -1.69
COPS3-204ENST00000462236 HENMT1Q5T8I9 393 aaKnown RBP4.51□□□□□ -1.69
COPS3-204ENST00000462236 LYPLAL1Q5VWZ2 237 aa4.51□□□□□ -1.69
COPS3-204ENST00000462236 GGNBP1Q5YKI7 109 aa4.51□□□□□ -1.69
COPS3-204ENST00000462236 AWAT2Q6E213 333 aa4.51□□□□□ -1.69
COPS3-204ENST00000462236 ABRAXAS1Q6UWZ7 409 aa4.51□□□□□ -1.69
COPS3-204ENST00000462236 GLDNQ6ZMI3 551 aaPredicted RBP4.51□□□□□ -1.69
COPS3-204ENST00000462236 MARK2Q7KZI7 788 aaKnown RBP4.51□□□□□ -1.69
COPS3-204ENST00000462236 PGBD5Q8N414 524 aa4.51□□□□□ -1.69
COPS3-204ENST00000462236 ZADH2Q8N4Q0 377 aa4.51□□□□□ -1.69
COPS3-204ENST00000462236 SIDT2Q8NBJ9 832 aaKnown RBP4.51□□□□□ -1.69
COPS3-204ENST00000462236 OR14A16Q8NHC5 309 aa4.51□□□□□ -1.69
COPS3-204ENST00000462236 EXD1Q8NHP7 514 aa4.51□□□□□ -1.69
COPS3-204ENST00000462236 JOSD2Q8TAC2 188 aa4.51□□□□□ -1.69
COPS3-204ENST00000462236 AP2M1Q96CW1 435 aa4.51□□□□□ -1.69
COPS3-204ENST00000462236 DHTKD1Q96HY7 919 aaPredicted RBP4.51□□□□□ -1.69
COPS3-204ENST00000462236 IP6K3Q96PC2 410 aa4.51□□□□□ -1.69
COPS3-204ENST00000462236 LYSMD1Q96S90 227 aa4.51□□□□□ -1.69
COPS3-204ENST00000462236 MAP3K3Q99759 626 aa4.51□□□□□ -1.69
COPS3-204ENST00000462236 MGME1Q9BQP7 344 aa4.51□□□□□ -1.69
COPS3-204ENST00000462236 SLC25A33Q9BSK2 321 aa4.51□□□□□ -1.69
COPS3-204ENST00000462236 CRACR2AQ9BSW2 395 aa4.51□□□□□ -1.69
COPS3-204ENST00000462236 TUBB2BQ9BVA1 445 aa4.51□□□□□ -1.69
COPS3-204ENST00000462236 SLC39A8Q9C0K1 460 aa4.51□□□□□ -1.69
COPS3-204ENST00000462236 ILKAPQ9H0C8 392 aaPredicted RBP4.51□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms