RNA–Protein interactions for RNA: ENST00000461328.1

VARS-219, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 662 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-219ENST00000461328 ZNF835Q9Y2P0 537 aa14.22□□□□□ -0.13
VARS-219ENST00000461328 POLR3HQ9Y535 204 aaPredicted RBP14.22□□□□□ -0.13
VARS-219ENST00000461328 NAV2Q8IVL1 2488 aa14.22□□□□□ -0.13
VARS-219ENST00000461328 DIDO1Q9BTC0 2240 aaKnown RBP14.22□□□□□ -0.13
VARS-219ENST00000461328 SLC28A1O00337 649 aa14.21□□□□□ -0.13
VARS-219ENST00000461328 RGS14O43566 566 aa14.21□□□□□ -0.13
VARS-219ENST00000461328 NPHS1O60500 1241 aa14.21□□□□□ -0.13
VARS-219ENST00000461328 CDC40O60508 579 aaKnown RBP eCLIP14.21□□□□□ -0.13
VARS-219ENST00000461328 ERLIN1O75477 346 aa14.21□□□□□ -0.13
VARS-219ENST00000461328 P04436 131 aa14.21□□□□□ -0.13
VARS-219ENST00000461328 CHRNGP07510 517 aa14.21□□□□□ -0.13
VARS-219ENST00000461328 MYZAPP0CAP1 466 aa14.21□□□□□ -0.13
VARS-219ENST00000461328 NEFHP12036 1026 aa14.21□□□□□ -0.13
VARS-219ENST00000461328 GSTM5P46439 218 aa14.21□□□□□ -0.13
VARS-219ENST00000461328 GALNT18Q6P9A2 607 aa14.21□□□□□ -0.13
VARS-219ENST00000461328 RPTNQ6XPR3 784 aa14.21□□□□□ -0.13
VARS-219ENST00000461328 Q6ZPB1 254 aaPredicted RBP14.21□□□□□ -0.13
VARS-219ENST00000461328 TRIM46Q7Z4K8 759 aa14.21□□□□□ -0.13
VARS-219ENST00000461328 MRGPRGQ86SM5 289 aa14.21□□□□□ -0.13
VARS-219ENST00000461328 DDIASQ8IXT1 998 aa14.21□□□□□ -0.13
VARS-219ENST00000461328 SAMD14Q8IZD0 417 aaPredicted RBP14.21□□□□□ -0.13
VARS-219ENST00000461328 GOLM1Q8NBJ4 401 aa14.21□□□□□ -0.13
VARS-219ENST00000461328 FAM13CQ8NE31 585 aa14.21□□□□□ -0.13
VARS-219ENST00000461328 ADCY4Q8NFM4 1077 aa14.21□□□□□ -0.13
VARS-219ENST00000461328 OR7G1Q8NGA0 311 aa14.21□□□□□ -0.13
VARS-219ENST00000461328 AGR3Q8TD06 166 aa14.21□□□□□ -0.13
VARS-219ENST00000461328 SPACA9Q96E40 222 aaPredicted RBP14.21□□□□□ -0.13
VARS-219ENST00000461328 SGCZQ96LD1 299 aa14.21□□□□□ -0.13
VARS-219ENST00000461328 ZIM3Q96PE6 472 aa14.21□□□□□ -0.13
VARS-219ENST00000461328 OR10A5Q9H207 317 aa14.21□□□□□ -0.13
VARS-219ENST00000461328 MIEF1Q9NQG6 463 aa14.21□□□□□ -0.13
VARS-219ENST00000461328 SACM1LQ9NTJ5 587 aa14.21□□□□□ -0.13
VARS-219ENST00000461328 PTGDR2Q9Y5Y4 395 aa14.21□□□□□ -0.13
VARS-219ENST00000461328 ACOT7O00154 380 aa14.2□□□□□ -0.14
VARS-219ENST00000461328 PRRG2O14669 202 aa14.2□□□□□ -0.14
VARS-219ENST00000461328 ZNHIT1O43257 154 aa14.2□□□□□ -0.14
VARS-219ENST00000461328 CTIFO43310 598 aaKnown RBP14.2□□□□□ -0.14
VARS-219ENST00000461328 HS6ST1O60243 411 aa14.2□□□□□ -0.14
VARS-219ENST00000461328 ZNF354AO60765 605 aaPredicted RBP14.2□□□□□ -0.14
VARS-219ENST00000461328 SEC22BO75396 215 aa14.2□□□□□ -0.14
VARS-219ENST00000461328 CLPSP04118 112 aa14.2□□□□□ -0.14
VARS-219ENST00000461328 ATP1B1P05026 303 aa14.2□□□□□ -0.14
VARS-219ENST00000461328 NR0B1P51843 470 aaKnown RBP14.2□□□□□ -0.14
VARS-219ENST00000461328 NRG3P56975 720 aa14.2□□□□□ -0.14
VARS-219ENST00000461328 FUT7Q11130 342 aa14.2□□□□□ -0.14
VARS-219ENST00000461328 LTB4RQ15722 352 aa14.2□□□□□ -0.14
VARS-219ENST00000461328 ARL13AQ5H913 290 aaPredicted RBP14.2□□□□□ -0.14
VARS-219ENST00000461328 SH2D4BQ5SQS7 431 aa14.2□□□□□ -0.14
VARS-219ENST00000461328 FAM111BQ6SJ93 734 aa14.2□□□□□ -0.14
VARS-219ENST00000461328 BNC2Q6ZN30 1099 aaPredicted RBP14.2□□□□□ -0.14
VARS-219ENST00000461328 GK5Q6ZS86 529 aa14.2□□□□□ -0.14
VARS-219ENST00000461328 FAM47EQ6ZV65 393 aa14.2□□□□□ -0.14
VARS-219ENST00000461328 CROCCP2Q86T23 111 aa14.2□□□□□ -0.14
VARS-219ENST00000461328 ZNF808Q8N4W9 903 aaPredicted RBP14.2□□□□□ -0.14
VARS-219ENST00000461328 SLC15A4Q8N697 577 aa14.2□□□□□ -0.14
VARS-219ENST00000461328 OR2M7Q8NG81 312 aa14.2□□□□□ -0.14
VARS-219ENST00000461328 OR5M3Q8NGP4 307 aa14.2□□□□□ -0.14
VARS-219ENST00000461328 C16orf52Q8NHV5 167 aa14.2□□□□□ -0.14
VARS-219ENST00000461328 ITLN2Q8WWU7 325 aaPredicted RBP14.2□□□□□ -0.14
VARS-219ENST00000461328 CNRIP1Q96F85 164 aaPredicted RBP14.2□□□□□ -0.14
VARS-219ENST00000461328 BBS4Q96RK4 519 aa14.2□□□□□ -0.14
VARS-219ENST00000461328 LRTM1Q9HBL6 345 aa14.2□□□□□ -0.14
VARS-219ENST00000461328 DEPPQ9NTK1 212 aa14.2□□□□□ -0.14
VARS-219ENST00000461328 MAT2BQ9NZL9 334 aa14.2□□□□□ -0.14
VARS-219ENST00000461328 A0A0G2JMM0 328 aa14.19□□□□□ -0.14
VARS-219ENST00000461328 A0A1W2PPB8 328 aa14.19□□□□□ -0.14
VARS-219ENST00000461328 A0A1W2PRS3 328 aa14.19□□□□□ -0.14
VARS-219ENST00000461328 KIR3DP1A8MWS1 328 aa14.19□□□□□ -0.14
VARS-219ENST00000461328 TMEM233B4DJY2 109 aa14.19□□□□□ -0.14
VARS-219ENST00000461328 PRSS44E7EML9 344 aa14.19□□□□□ -0.14
VARS-219ENST00000461328 TYROBPO43914 113 aa14.19□□□□□ -0.14
VARS-219ENST00000461328 NADKO95544 446 aaPredicted RBP14.19□□□□□ -0.14
VARS-219ENST00000461328 BPGMP07738 259 aa14.19□□□□□ -0.14
VARS-219ENST00000461328 CCL3P10147 92 aa14.19□□□□□ -0.14
VARS-219ENST00000461328 PCSK2P16519 638 aa14.19□□□□□ -0.14
VARS-219ENST00000461328 TMED10P49755 219 aaKnown RBP14.19□□□□□ -0.14
VARS-219ENST00000461328 PPIAP62937 165 aaKnown RBP14.19□□□□□ -0.14
VARS-219ENST00000461328 DUSP2Q05923 314 aa14.19□□□□□ -0.14
VARS-219ENST00000461328 C2orf80Q0P641 193 aa14.19□□□□□ -0.14
VARS-219ENST00000461328 EXOSC7Q15024 291 aaKnown RBP14.19□□□□□ -0.14
VARS-219ENST00000461328 NNATQ16517 81 aa14.19□□□□□ -0.14
VARS-219ENST00000461328 PRICKLE4Q2TBC4 344 aa14.19□□□□□ -0.14
VARS-219ENST00000461328 KANK2Q63ZY3 851 aa14.19□□□□□ -0.14
VARS-219ENST00000461328 NOXRED1Q6NXP6 359 aa14.19□□□□□ -0.14
VARS-219ENST00000461328 DND1Q8IYX4 353 aaKnown RBP14.19□□□□□ -0.14
VARS-219ENST00000461328 OR52R1Q8NGF1 315 aa14.19□□□□□ -0.14
VARS-219ENST00000461328 FAM76AQ8TAV0 307 aa14.19□□□□□ -0.14
VARS-219ENST00000461328 TWIST2Q8WVJ9 160 aa14.19□□□□□ -0.14
VARS-219ENST00000461328 PKNOX2Q96KN3 472 aa14.19□□□□□ -0.14
VARS-219ENST00000461328 FAM173AQ9BQD7 235 aa14.19□□□□□ -0.14
VARS-219ENST00000461328 KCNK9Q9NPC2 374 aa14.19□□□□□ -0.14
VARS-219ENST00000461328 C1orf109Q9NX04 203 aa14.19□□□□□ -0.14
VARS-219ENST00000461328 SIRT5Q9NXA8 310 aa14.19□□□□□ -0.14
VARS-219ENST00000461328 CFL2Q9Y281 166 aa14.19□□□□□ -0.14
VARS-219ENST00000461328 MEMO1Q9Y316 297 aa14.19□□□□□ -0.14
VARS-219ENST00000461328 UNC79Q9P2D8 2635 aa14.19□□□□□ -0.14
VARS-219ENST00000461328 A0A1B0GTH9 108 aa14.18□□□□□ -0.14
VARS-219ENST00000461328 WDR91A4D1P6 747 aa14.18□□□□□ -0.14
VARS-219ENST00000461328 PINLYPA6NC86 204 aa14.18□□□□□ -0.14
VARS-219ENST00000461328 FAM166BA8MTA8 275 aa14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms