RNA–Protein interactions for RNA: ENST00000460826.1

HDLBP-229, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 442 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-229ENST00000460826 BEST3Q8N1M1 668 aa13□□□□□ -0.33
HDLBP-229ENST00000460826 VWA5B2Q8N398 1253 aa13□□□□□ -0.33
HDLBP-229ENST00000460826 RBMXL3Q8N7X1 1067 aaKnown RBP13□□□□□ -0.33
HDLBP-229ENST00000460826 ZNF615Q8N8J6 731 aa13□□□□□ -0.33
HDLBP-229ENST00000460826 CEP70Q8NHQ1 597 aa13□□□□□ -0.33
HDLBP-229ENST00000460826 ZNF675Q8TD23 568 aa13□□□□□ -0.33
HDLBP-229ENST00000460826 SLC39A7Q92504 469 aa13□□□□□ -0.33
HDLBP-229ENST00000460826 ART5Q96L15 291 aa13□□□□□ -0.33
HDLBP-229ENST00000460826 TEX37Q96LM6 180 aa13□□□□□ -0.33
HDLBP-229ENST00000460826 NPHS2Q9NP85 383 aa13□□□□□ -0.33
HDLBP-229ENST00000460826 TCF7L2Q9NQB0 619 aa13□□□□□ -0.33
HDLBP-229ENST00000460826 COPS7AQ9UBW8 275 aa13□□□□□ -0.33
HDLBP-229ENST00000460826 DTX4Q9Y2E6 619 aa13□□□□□ -0.33
HDLBP-229ENST00000460826 PCDHGB7Q9Y5F8 929 aa13□□□□□ -0.33
HDLBP-229ENST00000460826 GPR45Q9Y5Y3 372 aa13□□□□□ -0.33
HDLBP-229ENST00000460826 C9JVG2 144 aa12.99□□□□□ -0.33
HDLBP-229ENST00000460826 E9PBE3 544 aa12.99□□□□□ -0.33
HDLBP-229ENST00000460826 POLR3GO15318 223 aaPredicted RBP12.99□□□□□ -0.33
HDLBP-229ENST00000460826 KLHL41O60662 606 aa12.99□□□□□ -0.33
HDLBP-229ENST00000460826 ZNF354AO60765 605 aaPredicted RBP12.99□□□□□ -0.33
HDLBP-229ENST00000460826 NME6O75414 186 aaPredicted RBP12.99□□□□□ -0.33
HDLBP-229ENST00000460826 ZFAND5O76080 213 aa12.99□□□□□ -0.33
HDLBP-229ENST00000460826 WDPCPO95876 746 aa12.99□□□□□ -0.33
HDLBP-229ENST00000460826 PRB1P04280 392 aa12.99□□□□□ -0.33
HDLBP-229ENST00000460826 ALPPP05187 535 aa12.99□□□□□ -0.33
HDLBP-229ENST00000460826 PRPS1L1P21108 318 aa12.99□□□□□ -0.33
HDLBP-229ENST00000460826 IL12AP29459 219 aa12.99□□□□□ -0.33
HDLBP-229ENST00000460826 MPIP34949 423 aa12.99□□□□□ -0.33
HDLBP-229ENST00000460826 FRKP42685 505 aaPredicted RBP12.99□□□□□ -0.33
HDLBP-229ENST00000460826 MLF1P58340 268 aa12.99□□□□□ -0.33
HDLBP-229ENST00000460826 UFM1P61960 85 aa12.99□□□□□ -0.33
HDLBP-229ENST00000460826 SF3A3Q12874 501 aaKnown RBP eCLIP12.99□□□□□ -0.338e-9■■■■□ 19.9
HDLBP-229ENST00000460826 MEP1AQ16819 746 aa12.99□□□□□ -0.33
HDLBP-229ENST00000460826 CPTPQ5TA50 214 aa12.99□□□□□ -0.33
HDLBP-229ENST00000460826 FHL5Q5TD97 284 aa12.99□□□□□ -0.33
HDLBP-229ENST00000460826 ZNF468Q5VIY5 522 aaPredicted RBP12.99□□□□□ -0.33
HDLBP-229ENST00000460826 ABHD17BQ5VST6 288 aa12.99□□□□□ -0.33
HDLBP-229ENST00000460826 ACAD11Q709F0 780 aa12.99□□□□□ -0.33
HDLBP-229ENST00000460826 PTRH1Q86Y79 214 aaKnown RBP12.99□□□□□ -0.33
HDLBP-229ENST00000460826 ARMC10Q8N2F6 343 aa12.99□□□□□ -0.33
HDLBP-229ENST00000460826 SLC5A8Q8N695 610 aa12.99□□□□□ -0.33
HDLBP-229ENST00000460826 LSM14AQ8ND56 463 aaKnown RBP12.99□□□□□ -0.33
HDLBP-229ENST00000460826 OR7G2Q8NG99 324 aa12.99□□□□□ -0.33
HDLBP-229ENST00000460826 OR8K3Q8NH51 312 aa12.99□□□□□ -0.33
HDLBP-229ENST00000460826 COQ8BQ96D53 544 aa12.99□□□□□ -0.33
HDLBP-229ENST00000460826 ZNF354BQ96LW1 612 aa12.99□□□□□ -0.33
HDLBP-229ENST00000460826 LMF1Q96S06 567 aa12.99□□□□□ -0.33
HDLBP-229ENST00000460826 MFRPQ9BY79 579 aa12.99□□□□□ -0.33
HDLBP-229ENST00000460826 DPY30Q9C005 99 aa12.99□□□□□ -0.33
HDLBP-229ENST00000460826 OR10A5Q9H207 317 aa12.99□□□□□ -0.33
HDLBP-229ENST00000460826 STMN3Q9NZ72 180 aa12.99□□□□□ -0.33
HDLBP-229ENST00000460826 DCTN4Q9UJW0 460 aa12.99□□□□□ -0.33
HDLBP-229ENST00000460826 SPENQ96T58 3664 aaKnown RBP12.99□□□□□ -0.33
HDLBP-229ENST00000460826 WWP2O00308 870 aa12.98□□□□□ -0.33
HDLBP-229ENST00000460826 UBDO15205 165 aa12.98□□□□□ -0.33
HDLBP-229ENST00000460826 VIMP08670 466 aaKnown RBP12.98□□□□□ -0.33
HDLBP-229ENST00000460826 SFTPCP11686 197 aa12.98□□□□□ -0.33
HDLBP-229ENST00000460826 RPL3P39023 403 aaKnown RBP12.98□□□□□ -0.33
HDLBP-229ENST00000460826 MC3RP41968 323 aa12.98□□□□□ -0.33
HDLBP-229ENST00000460826 CDK9P50750 372 aaKnown RBP12.98□□□□□ -0.33
HDLBP-229ENST00000460826 PHC1P78364 1004 aa12.98□□□□□ -0.33
HDLBP-229ENST00000460826 HSPB3Q12988 150 aa12.98□□□□□ -0.33
HDLBP-229ENST00000460826 EBPQ15125 230 aaKnown RBP12.98□□□□□ -0.33
HDLBP-229ENST00000460826 PGS1Q32NB8 556 aa12.98□□□□□ -0.33
HDLBP-229ENST00000460826 C6orf163Q5TEZ5 329 aa12.98□□□□□ -0.33
HDLBP-229ENST00000460826 OR4F3Q6IEY1 312 aa12.98□□□□□ -0.33
HDLBP-229ENST00000460826 TMEM107Q6UX40 140 aa12.98□□□□□ -0.33
HDLBP-229ENST00000460826 IGFL3Q6UXB1 125 aa12.98□□□□□ -0.33
HDLBP-229ENST00000460826 LGI4Q8N135 537 aa12.98□□□□□ -0.33
HDLBP-229ENST00000460826 OR7G1Q8NGA0 311 aa12.98□□□□□ -0.33
HDLBP-229ENST00000460826 OR52R1Q8NGF1 315 aa12.98□□□□□ -0.33
HDLBP-229ENST00000460826 ZNF317Q96PQ6 595 aaPredicted RBP12.98□□□□□ -0.33
HDLBP-229ENST00000460826 CCDC28BQ9BUN5 200 aa12.98□□□□□ -0.33
HDLBP-229ENST00000460826 WWTR1Q9GZV5 400 aa12.98□□□□□ -0.33
HDLBP-229ENST00000460826 EPS8L2Q9H6S3 715 aa12.98□□□□□ -0.33
HDLBP-229ENST00000460826 BCAP29Q9UHQ4 241 aa12.98□□□□□ -0.33
HDLBP-229ENST00000460826 TEKT2Q9UIF3 430 aa12.98□□□□□ -0.33
HDLBP-229ENST00000460826 NBASA2RRP1 2371 aa12.97□□□□□ -0.33
HDLBP-229ENST00000460826 PLOD3O60568 738 aa12.97□□□□□ -0.33
HDLBP-229ENST00000460826 DPM1O60762 260 aa12.97□□□□□ -0.33
HDLBP-229ENST00000460826 ITGA10O75578 1167 aa12.97□□□□□ -0.33
HDLBP-229ENST00000460826 IDO1P14902 403 aa12.97□□□□□ -0.33
HDLBP-229ENST00000460826 GPX3P22352 226 aa12.97□□□□□ -0.33
HDLBP-229ENST00000460826 ZFP36L2P47974 494 aaKnown RBP12.97□□□□□ -0.33
HDLBP-229ENST00000460826 EMDP50402 254 aa12.97□□□□□ -0.33
HDLBP-229ENST00000460826 WNT3P56703 355 aa12.97□□□□□ -0.33
HDLBP-229ENST00000460826 NFATC3Q12968 1075 aa12.97□□□□□ -0.33
HDLBP-229ENST00000460826 NADK2Q4G0N4 442 aa12.97□□□□□ -0.33
HDLBP-229ENST00000460826 PDCD4Q53EL6 469 aaKnown RBP12.97□□□□□ -0.33
HDLBP-229ENST00000460826 SPANXN4Q5MJ08 99 aa12.97□□□□□ -0.33
HDLBP-229ENST00000460826 CAMKMTQ7Z624 323 aa12.97□□□□□ -0.33
HDLBP-229ENST00000460826 ZADH2Q8N4Q0 377 aa12.97□□□□□ -0.33
HDLBP-229ENST00000460826 ZNF441Q8N8Z8 693 aa12.97□□□□□ -0.33
HDLBP-229ENST00000460826 CATSPER1Q8NEC5 780 aa12.97□□□□□ -0.33
HDLBP-229ENST00000460826 C16orf52Q8NHV5 167 aa12.97□□□□□ -0.33
HDLBP-229ENST00000460826 ELP4Q96EB1 424 aa12.97□□□□□ -0.33
HDLBP-229ENST00000460826 ZBED6CLQ96FA7 236 aaPredicted RBP12.97□□□□□ -0.33
HDLBP-229ENST00000460826 GAL3ST4Q96RP7 486 aa12.97□□□□□ -0.33
HDLBP-229ENST00000460826 DUSP26Q9BV47 211 aa12.97□□□□□ -0.33
HDLBP-229ENST00000460826 ITPAQ9BY32 194 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms