RNA–Protein interactions for RNA: ENST00000460162.1

PTPN4-207, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 4

Gene PTPN4, Length 623 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-207ENST00000460162 C17orf47Q8NEP4 570 aa20.93■□□□□ 0.94
PTPN4-207ENST00000460162 OR10Q1Q8NGQ4 319 aa20.93■□□□□ 0.94
PTPN4-207ENST00000460162 TRPC4APQ8TEL6 797 aa20.93■□□□□ 0.94
PTPN4-207ENST00000460162 SECISBP2Q96T21 854 aaKnown RBP20.93■□□□□ 0.94
PTPN4-207ENST00000460162 BRF2Q9HAW0 419 aa20.93■□□□□ 0.94
PTPN4-207ENST00000460162 F8P00451 2351 aa20.92■□□□□ 0.94
PTPN4-207ENST00000460162 C1orf226A1L170 272 aa20.92■□□□□ 0.94
PTPN4-207ENST00000460162 A8MT66 165 aa20.92■□□□□ 0.94
PTPN4-207ENST00000460162 CT62P0C5K7 136 aa20.92■□□□□ 0.94
PTPN4-207ENST00000460162 CPMP14384 443 aa20.92■□□□□ 0.94
PTPN4-207ENST00000460162 MAPK12P53778 367 aa20.92■□□□□ 0.94
PTPN4-207ENST00000460162 NRG3P56975 720 aa20.92■□□□□ 0.94
PTPN4-207ENST00000460162 DMRTC2Q8IXT2 367 aaPredicted RBP20.92■□□□□ 0.94
PTPN4-207ENST00000460162 ZNF615Q8N8J6 731 aa20.92■□□□□ 0.94
PTPN4-207ENST00000460162 OR7G1Q8NGA0 311 aa20.92■□□□□ 0.94
PTPN4-207ENST00000460162 NEIL3Q8TAT5 605 aa20.92■□□□□ 0.94
PTPN4-207ENST00000460162 DIO2Q92813 273 aa20.92■□□□□ 0.94
PTPN4-207ENST00000460162 JSRP1Q96MG2 331 aaPredicted RBP20.92■□□□□ 0.94
PTPN4-207ENST00000460162 OR10A5Q9H207 317 aa20.92■□□□□ 0.94
PTPN4-207ENST00000460162 SLC6A15Q9H2J7 730 aa20.92■□□□□ 0.94
PTPN4-207ENST00000460162 SLC24A3Q9HC58 644 aa20.92■□□□□ 0.94
PTPN4-207ENST00000460162 TRPS1Q9UHF7 1281 aa20.92■□□□□ 0.94
PTPN4-207ENST00000460162 SNX6Q9UNH7 406 aa20.92■□□□□ 0.94
PTPN4-207ENST00000460162 SLC12A4Q9UP95 1085 aa20.92■□□□□ 0.94
PTPN4-207ENST00000460162 NINQ8N4C6 2090 aa20.92■□□□□ 0.94
PTPN4-207ENST00000460162 GOLGA6L10A6NI86 522 aa20.91■□□□□ 0.94
PTPN4-207ENST00000460162 TRIM3O75382 744 aaPredicted RBP20.91■□□□□ 0.94
PTPN4-207ENST00000460162 LRATO95237 230 aa20.91■□□□□ 0.94
PTPN4-207ENST00000460162 CTAGE8P0CG41 777 aa20.91■□□□□ 0.94
PTPN4-207ENST00000460162 NT5EP21589 574 aa20.91■□□□□ 0.94
PTPN4-207ENST00000460162 XKP51811 444 aa20.91■□□□□ 0.94
PTPN4-207ENST00000460162 RPP38P78345 283 aaKnown RBP20.91■□□□□ 0.94
PTPN4-207ENST00000460162 SLC48A1Q6P1K1 146 aa20.91■□□□□ 0.94
PTPN4-207ENST00000460162 LETMD1Q6P1Q0 360 aa20.91■□□□□ 0.94
PTPN4-207ENST00000460162 CDH24Q86UP0 819 aa20.91■□□□□ 0.94
PTPN4-207ENST00000460162 CTAGE4Q8IX94 777 aa20.91■□□□□ 0.94
PTPN4-207ENST00000460162 LIX1Q8N485 282 aa20.91■□□□□ 0.94
PTPN4-207ENST00000460162 SELENOMQ8WWX9 145 aa20.91■□□□□ 0.94
PTPN4-207ENST00000460162 ADIPOR1Q96A54 375 aa20.91■□□□□ 0.94
PTPN4-207ENST00000460162 PCDHA9Q9Y5H5 950 aa20.91■□□□□ 0.94
PTPN4-207ENST00000460162 NPFFR2Q9Y5X5 522 aa20.91■□□□□ 0.94
PTPN4-207ENST00000460162 A0A0G2JNJ9 132 aa20.9■□□□□ 0.94
PTPN4-207ENST00000460162 A0A1B0GTL3 188 aa20.9■□□□□ 0.94
PTPN4-207ENST00000460162 EXOC1LA0A1B0GW35 172 aa20.9■□□□□ 0.94
PTPN4-207ENST00000460162 ATP1B1P05026 303 aa20.9■□□□□ 0.94
PTPN4-207ENST00000460162 SNRPAP09012 282 aaKnown RBP20.9■□□□□ 0.94
PTPN4-207ENST00000460162 SBK3P0C264 359 aa20.9■□□□□ 0.94
PTPN4-207ENST00000460162 PORP16435 677 aaPredicted RBP20.9■□□□□ 0.94
PTPN4-207ENST00000460162 POU3F2P20265 443 aaPredicted RBP20.9■□□□□ 0.94
PTPN4-207ENST00000460162 GDF1P27539 372 aa20.9■□□□□ 0.94
PTPN4-207ENST00000460162 FBXW4P57775 412 aa20.9■□□□□ 0.94
PTPN4-207ENST00000460162 GALNT1Q10472 559 aaPredicted RBP20.9■□□□□ 0.94
PTPN4-207ENST00000460162 SGO1Q5FBB7 561 aa20.9■□□□□ 0.94
PTPN4-207ENST00000460162 TMEM198Q66K66 360 aa20.9■□□□□ 0.94
PTPN4-207ENST00000460162 RPS27LQ71UM5 84 aaKnown RBP20.9■□□□□ 0.94
PTPN4-207ENST00000460162 CLYBLQ8N0X4 340 aa20.9■□□□□ 0.94
PTPN4-207ENST00000460162 VWA5B2Q8N398 1253 aa20.9■□□□□ 0.94
PTPN4-207ENST00000460162 SPPL2AQ8TCT8 520 aa20.9■□□□□ 0.94
PTPN4-207ENST00000460162 ZNF592Q92610 1267 aa20.9■□□□□ 0.94
PTPN4-207ENST00000460162 FARSBQ9NSD9 589 aaKnown RBP20.9■□□□□ 0.94
PTPN4-207ENST00000460162 NMRK1Q9NWW6 199 aa20.9■□□□□ 0.94
PTPN4-207ENST00000460162 Q9UFV3 132 aa20.9■□□□□ 0.94
PTPN4-207ENST00000460162 KCNN3Q9UGI6 736 aa20.9■□□□□ 0.94
PTPN4-207ENST00000460162 SNX4O95219 450 aa20.89■□□□□ 0.93
PTPN4-207ENST00000460162 PDYNP01213 254 aa20.89■□□□□ 0.93
PTPN4-207ENST00000460162 ABHD2P08910 425 aa20.89■□□□□ 0.93
PTPN4-207ENST00000460162 GPX3P22352 226 aa20.89■□□□□ 0.93
PTPN4-207ENST00000460162 SLC25A35Q3KQZ1 300 aa20.89■□□□□ 0.93
PTPN4-207ENST00000460162 RIPPLY2Q5TAB7 128 aa20.89■□□□□ 0.93
PTPN4-207ENST00000460162 LGSNQ5TDP6 509 aa20.89■□□□□ 0.93
PTPN4-207ENST00000460162 TMEM64Q6YI46 380 aa20.89■□□□□ 0.93
PTPN4-207ENST00000460162 TMEM151AQ8N4L1 468 aa20.89■□□□□ 0.93
PTPN4-207ENST00000460162 UHMK1Q8TAS1 419 aaKnown RBP20.89■□□□□ 0.93
PTPN4-207ENST00000460162 RILPQ96NA2 401 aa20.89■□□□□ 0.93
PTPN4-207ENST00000460162 CES1P1Q9UKY3 287 aa20.89■□□□□ 0.93
PTPN4-207ENST00000460162 CFL2Q9Y281 166 aa20.89■□□□□ 0.93
PTPN4-207ENST00000460162 FREM3P0C091 2139 aa20.88■□□□□ 0.93
PTPN4-207ENST00000460162 HSD3B1P14060 373 aa20.88■□□□□ 0.93
PTPN4-207ENST00000460162 HSD3B2P26439 372 aa20.88■□□□□ 0.93
PTPN4-207ENST00000460162 ADH7P40394 386 aa20.88■□□□□ 0.93
PTPN4-207ENST00000460162 CDH13P55290 713 aa20.88■□□□□ 0.93
PTPN4-207ENST00000460162 PRICKLE4Q2TBC4 344 aa20.88■□□□□ 0.93
PTPN4-207ENST00000460162 LCA5Q86VQ0 697 aa20.88■□□□□ 0.93
PTPN4-207ENST00000460162 ULK2Q8IYT8 1036 aa20.88■□□□□ 0.93
PTPN4-207ENST00000460162 MTBPQ96DY7 904 aa20.88■□□□□ 0.93
PTPN4-207ENST00000460162 ANGPTL4Q9BY76 406 aa20.88■□□□□ 0.93
PTPN4-207ENST00000460162 UBQLN3Q9H347 655 aa20.88■□□□□ 0.93
PTPN4-207ENST00000460162 ALKBH4Q9NXW9 302 aa20.88■□□□□ 0.93
PTPN4-207ENST00000460162 PPP6CO00743 305 aa20.87■□□□□ 0.93
PTPN4-207ENST00000460162 CDH16O75309 829 aa20.87■□□□□ 0.93
PTPN4-207ENST00000460162 KRT15P19012 456 aa20.87■□□□□ 0.93
PTPN4-207ENST00000460162 TSPAN8P19075 237 aa20.87■□□□□ 0.93
PTPN4-207ENST00000460162 CSNK2A2P19784 350 aaPredicted RBP20.87■□□□□ 0.93
PTPN4-207ENST00000460162 TAC1P20366 129 aa20.87■□□□□ 0.93
PTPN4-207ENST00000460162 S1PR1P21453 382 aa20.87■□□□□ 0.93
PTPN4-207ENST00000460162 ABCD3P28288 659 aa20.87■□□□□ 0.93
PTPN4-207ENST00000460162 DEKP35659 375 aaKnown RBP20.87■□□□□ 0.93
PTPN4-207ENST00000460162 MASP1P48740 699 aa20.87■□□□□ 0.93
PTPN4-207ENST00000460162 TRA2BP62995 288 aaKnown RBP20.87■□□□□ 0.93
PTPN4-207ENST00000460162 CLCQ05315 142 aa20.87■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms