RNA–Protein interactions for RNA: ENST00000459775.5

USP39-210, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2

Gene USP39, Length 2,148 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-210ENST00000459775 CLEC4FQ8N1N0 589 aa9.73□□□□□ -0.85
USP39-210ENST00000459775 TMEM132CQ8N3T6 1108 aa9.73□□□□□ -0.85
USP39-210ENST00000459775 TMEM52Q8NDY8 209 aa9.73□□□□□ -0.85
USP39-210ENST00000459775 OR56B2PQ8NGI1 322 aa9.73□□□□□ -0.85
USP39-210ENST00000459775 EFHD2Q96C19 240 aaPredicted RBP9.73□□□□□ -0.85
USP39-210ENST00000459775 ZNF285Q96NJ3 590 aa9.73□□□□□ -0.85
USP39-210ENST00000459775 CENPKQ9BS16 269 aa9.73□□□□□ -0.85
USP39-210ENST00000459775 CLMPQ9H6B4 373 aa9.73□□□□□ -0.85
USP39-210ENST00000459775 AHSPQ9NZD4 102 aa9.73□□□□□ -0.85
USP39-210ENST00000459775 SH3BP4Q9P0V3 963 aa9.73□□□□□ -0.85
USP39-210ENST00000459775 MAP10Q9P2G4 905 aa9.73□□□□□ -0.85
USP39-210ENST00000459775 NDOR1Q9UHB4 597 aa9.73□□□□□ -0.85
USP39-210ENST00000459775 SLC7A8Q9UHI5 535 aa9.73□□□□□ -0.85
USP39-210ENST00000459775 ASPMQ8IZT6 3477 aa9.73□□□□□ -0.85
USP39-210ENST00000459775 A0A1W2PNU3 283 aaPredicted RBP9.72□□□□□ -0.85
USP39-210ENST00000459775 EIF4E1BA6NMX2 242 aaKnown RBP9.72□□□□□ -0.85
USP39-210ENST00000459775 EFCAB7A8K855 629 aa9.72□□□□□ -0.85
USP39-210ENST00000459775 GALR3O60755 368 aaPredicted RBP9.72□□□□□ -0.85
USP39-210ENST00000459775 JRKO75564 520 aa9.72□□□□□ -0.85
USP39-210ENST00000459775 CDC123O75794 336 aaPredicted RBP9.72□□□□□ -0.85
USP39-210ENST00000459775 GSNP06396 782 aa9.72□□□□□ -0.85
USP39-210ENST00000459775 PRPS2P11908 318 aa9.72□□□□□ -0.85
USP39-210ENST00000459775 COX7A2P14406 83 aa9.72□□□□□ -0.85
USP39-210ENST00000459775 SPINK2P20155 84 aa9.72□□□□□ -0.85
USP39-210ENST00000459775 NCALDP61601 193 aa9.72□□□□□ -0.85
USP39-210ENST00000459775 S100A12P80511 92 aa9.72□□□□□ -0.85
USP39-210ENST00000459775 RCAN2Q14206 197 aa9.72□□□□□ -0.85
USP39-210ENST00000459775 CAPRIN1Q14444 709 aaKnown RBP9.72□□□□□ -0.85
USP39-210ENST00000459775 SMU1Q2TAY7 513 aa9.72□□□□□ -0.85
USP39-210ENST00000459775 GTDC1Q4AE62 458 aa9.72□□□□□ -0.85
USP39-210ENST00000459775 CDONQ4KMG0 1287 aa9.72□□□□□ -0.85
USP39-210ENST00000459775 RPS26P11Q5JNZ5 115 aaPredicted RBP9.72□□□□□ -0.85
USP39-210ENST00000459775 PWWP2BQ6NUJ5 590 aa9.72□□□□□ -0.85
USP39-210ENST00000459775 ZBTB46Q86UZ6 589 aa9.72□□□□□ -0.85
USP39-210ENST00000459775 COMTD1Q86VU5 262 aa9.72□□□□□ -0.85
USP39-210ENST00000459775 TICAM1Q8IUC6 712 aa9.72□□□□□ -0.85
USP39-210ENST00000459775 CLECL1Q8IZS7 167 aa9.72□□□□□ -0.85
USP39-210ENST00000459775 AMER2Q8N7J2 671 aa9.72□□□□□ -0.85
USP39-210ENST00000459775 FAM47BQ8NA70 645 aa9.72□□□□□ -0.85
USP39-210ENST00000459775 RBM15BQ8NDT2 890 aaKnown RBP9.72□□□□□ -0.85
USP39-210ENST00000459775 INPP5KQ9BT40 448 aa9.72□□□□□ -0.85
USP39-210ENST00000459775 TBCDQ9BTW9 1192 aa9.72□□□□□ -0.85
USP39-210ENST00000459775 AKIRIN1Q9H9L7 192 aaPredicted RBP9.72□□□□□ -0.85
USP39-210ENST00000459775 COPS7BQ9H9Q2 264 aaPredicted RBP9.72□□□□□ -0.85
USP39-210ENST00000459775 C12orf4Q9NQ89 552 aa9.72□□□□□ -0.85
USP39-210ENST00000459775 KCMF1Q9P0J7 381 aa9.72□□□□□ -0.85
USP39-210ENST00000459775 GMPR2Q9P2T1 348 aaKnown RBP9.72□□□□□ -0.85
USP39-210ENST00000459775 FREM2Q5SZK8 3169 aa9.71□□□□□ -0.85
USP39-210ENST00000459775 CACNA1GO43497 2377 aa9.71□□□□□ -0.85
USP39-210ENST00000459775 FAM234BA2RU67 622 aa9.71□□□□□ -0.85
USP39-210ENST00000459775 SCAMP2O15127 329 aaKnown RBP9.71□□□□□ -0.85
USP39-210ENST00000459775 RFPL3O75679 317 aa9.71□□□□□ -0.85
USP39-210ENST00000459775 SORBS2O94875 1100 aaKnown RBP9.71□□□□□ -0.85
USP39-210ENST00000459775 UNC5CO95185 931 aa9.71□□□□□ -0.85
USP39-210ENST00000459775 AIFM1O95831 613 aa9.71□□□□□ -0.85
USP39-210ENST00000459775 GP1BAP07359 652 aa9.71□□□□□ -0.85
USP39-210ENST00000459775 FURINP09958 794 aa9.71□□□□□ -0.85
USP39-210ENST00000459775 C8orf89P0DMQ9 161 aa9.71□□□□□ -0.85
USP39-210ENST00000459775 MAPK3P27361 379 aaPredicted RBP9.71□□□□□ -0.85
USP39-210ENST00000459775 NUDT2P50583 147 aa9.71□□□□□ -0.85
USP39-210ENST00000459775 ALDH3A2P51648 485 aa9.71□□□□□ -0.85
USP39-210ENST00000459775 LIM2P55344 173 aa9.71□□□□□ -0.85
USP39-210ENST00000459775 WNT3P56703 355 aa9.71□□□□□ -0.85
USP39-210ENST00000459775 KCNK10P57789 538 aa9.71□□□□□ -0.85
USP39-210ENST00000459775 SIM1P81133 766 aaPredicted RBP9.71□□□□□ -0.85
USP39-210ENST00000459775 DUSP2Q05923 314 aa9.71□□□□□ -0.85
USP39-210ENST00000459775 TLR1Q15399 786 aa9.71□□□□□ -0.85
USP39-210ENST00000459775 FAM91A1Q658Y4 838 aa9.71□□□□□ -0.85
USP39-210ENST00000459775 REP15Q6BDI9 236 aa9.71□□□□□ -0.85
USP39-210ENST00000459775 MRM1Q6IN84 353 aaKnown RBP9.71□□□□□ -0.85
USP39-210ENST00000459775 SLC30A6Q6NXT4 461 aa9.71□□□□□ -0.85
USP39-210ENST00000459775 MOSPD2Q8NHP6 518 aa9.71□□□□□ -0.85
USP39-210ENST00000459775 EXOSC8Q96B26 276 aaKnown RBP9.71□□□□□ -0.85
USP39-210ENST00000459775 NDEL1Q9GZM8 345 aa9.71□□□□□ -0.85
USP39-210ENST00000459775 PAQR5Q9NXK6 330 aaPredicted RBP9.71□□□□□ -0.85
USP39-210ENST00000459775 SIDT1Q9NXL6 827 aaKnown RBP9.71□□□□□ -0.85
USP39-210ENST00000459775 TAS2R7Q9NYW3 318 aa9.71□□□□□ -0.85
USP39-210ENST00000459775 TAS2R1Q9NYW7 299 aa9.71□□□□□ -0.85
USP39-210ENST00000459775 ATRXP46100 2492 aa9.71□□□□□ -0.85
USP39-210ENST00000459775 SPTBN2O15020 2390 aa9.71□□□□□ -0.86
USP39-210ENST00000459775 TEX51A0A1B0GUA7 166 aa9.71□□□□□ -0.86
USP39-210ENST00000459775 A6NHS1 94 aa9.71□□□□□ -0.86
USP39-210ENST00000459775 CCDC154A6NI56 674 aa9.71□□□□□ -0.86
USP39-210ENST00000459775 SMPD2O60906 423 aa9.71□□□□□ -0.86
USP39-210ENST00000459775 ANKRD34CP0C6C1 535 aa9.71□□□□□ -0.86
USP39-210ENST00000459775 ZNF28P17035 718 aa9.71□□□□□ -0.86
USP39-210ENST00000459775 ITGAXP20702 1163 aa9.71□□□□□ -0.86
USP39-210ENST00000459775 PRPS1L1P21108 318 aa9.71□□□□□ -0.86
USP39-210ENST00000459775 GSTM2P28161 218 aa9.71□□□□□ -0.86
USP39-210ENST00000459775 CPOXP36551 454 aa9.71□□□□□ -0.86
USP39-210ENST00000459775 ETV5P41161 510 aa9.71□□□□□ -0.86
USP39-210ENST00000459775 CDKN2CP42773 168 aa9.71□□□□□ -0.86
USP39-210ENST00000459775 FAM69BQ5VUD6 431 aa9.71□□□□□ -0.86
USP39-210ENST00000459775 MEX3BQ6ZN04 569 aaKnown RBP9.71□□□□□ -0.86
USP39-210ENST00000459775 ABHD13Q7L211 337 aa9.71□□□□□ -0.86
USP39-210ENST00000459775 PAGE2Q7Z2X7 111 aa9.71□□□□□ -0.86
USP39-210ENST00000459775 GPR180Q86V85 440 aa9.71□□□□□ -0.86
USP39-210ENST00000459775 BMPERQ8N8U9 685 aa9.71□□□□□ -0.86
USP39-210ENST00000459775 RP9Q8TA86 221 aaKnown RBP9.71□□□□□ -0.86
USP39-210ENST00000459775 FAM216AQ8WUB2 273 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms