RNA–Protein interactions for RNA: ENST00000452852.1

LINC00393-202, long intergenic non-protein coding RNA 393, humanhuman

TSL 3 BASIC

Gene LINC00393, Length 485 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00393-202ENST00000452852 RIMS4Q9H426 269 aaPredicted RBP3.95□□□□□ -1.78
LINC00393-202ENST00000452852 MAGEF1Q9HAY2 307 aa3.95□□□□□ -1.78
LINC00393-202ENST00000452852 PARVGQ9HBI0 331 aa3.95□□□□□ -1.78
LINC00393-202ENST00000452852 CD93Q9NPY3 652 aa3.95□□□□□ -1.78
LINC00393-202ENST00000452852 HEBP1Q9NRV9 189 aa3.95□□□□□ -1.78
LINC00393-202ENST00000452852 FAM118AQ9NWS6 357 aa3.95□□□□□ -1.78
LINC00393-202ENST00000452852 SOHLH2Q9NX45 425 aa3.95□□□□□ -1.78
LINC00393-202ENST00000452852 SMARCAL1Q9NZC9 954 aa3.95□□□□□ -1.78
LINC00393-202ENST00000452852 ZNF224Q9NZL3 707 aa3.95□□□□□ -1.78
LINC00393-202ENST00000452852 TUBGCP4Q9UGJ1 667 aa3.95□□□□□ -1.78
LINC00393-202ENST00000452852 UBQLN2Q9UHD9 624 aa3.95□□□□□ -1.78
LINC00393-202ENST00000452852 SMC3Q9UQE7 1217 aa3.95□□□□□ -1.78
LINC00393-202ENST00000452852 ASB3Q9Y575 518 aa3.95□□□□□ -1.78
LINC00393-202ENST00000452852 MYO16Q9Y6X6 1858 aa3.94□□□□□ -1.78
LINC00393-202ENST00000452852 SCN1AP35498 2009 aa3.94□□□□□ -1.78
LINC00393-202ENST00000452852 GREB1Q4ZG55 1949 aa3.94□□□□□ -1.78
LINC00393-202ENST00000452852 TTC26A0AVF1 554 aa3.94□□□□□ -1.78
LINC00393-202ENST00000452852 MACROD2A1Z1Q3 448 aa3.94□□□□□ -1.78
LINC00393-202ENST00000452852 ANKDD1BA6NHY2 528 aa3.94□□□□□ -1.78
LINC00393-202ENST00000452852 KPNA7A9QM74 516 aa3.94□□□□□ -1.78
LINC00393-202ENST00000452852 TMEM150CB9EJG8 249 aa3.94□□□□□ -1.78
LINC00393-202ENST00000452852 OR6B1O95007 311 aa3.94□□□□□ -1.78
LINC00393-202ENST00000452852 AKR7A3O95154 331 aa3.94□□□□□ -1.78
LINC00393-202ENST00000452852 SEC24AO95486 1093 aa3.94□□□□□ -1.78
LINC00393-202ENST00000452852 PMS2P2O95744 297 aa3.94□□□□□ -1.78
LINC00393-202ENST00000452852 FGF3P11487 239 aaPredicted RBP3.94□□□□□ -1.78
LINC00393-202ENST00000452852 HLA-DOBP13765 273 aa3.94□□□□□ -1.78
LINC00393-202ENST00000452852 GJB2P29033 226 aa3.94□□□□□ -1.78
LINC00393-202ENST00000452852 LONP1P36776 959 aaKnown RBP3.94□□□□□ -1.78
LINC00393-202ENST00000452852 TUFMP49411 452 aaKnown RBP3.94□□□□□ -1.78
LINC00393-202ENST00000452852 PDLIM4P50479 330 aa3.94□□□□□ -1.78
LINC00393-202ENST00000452852 HNRNPFP52597 415 aaKnown RBP3.94□□□□□ -1.78
LINC00393-202ENST00000452852 CACNG1Q06432 222 aa3.94□□□□□ -1.78
LINC00393-202ENST00000452852 IL10RBQ08334 325 aa3.94□□□□□ -1.78
LINC00393-202ENST00000452852 ABRQ12979 859 aa3.94□□□□□ -1.78
LINC00393-202ENST00000452852 NFATC4Q14934 902 aa3.94□□□□□ -1.78
LINC00393-202ENST00000452852 TMEM132DQ14C87 1099 aa3.94□□□□□ -1.78
LINC00393-202ENST00000452852 TEAD2Q15562 447 aa3.94□□□□□ -1.78
LINC00393-202ENST00000452852 CEBPEQ15744 281 aa3.94□□□□□ -1.78
LINC00393-202ENST00000452852 IL17AQ16552 155 aa3.94□□□□□ -1.78
LINC00393-202ENST00000452852 DUOXA1Q1HG43 343 aa3.94□□□□□ -1.78
LINC00393-202ENST00000452852 ITPRIPL2Q3MIP1 535 aa3.94□□□□□ -1.78
LINC00393-202ENST00000452852 ANKDD1AQ495B1 522 aa3.94□□□□□ -1.78
LINC00393-202ENST00000452852 CCDC40Q4G0X9 1142 aa3.94□□□□□ -1.78
LINC00393-202ENST00000452852 HSP90AA5PQ58FG0 334 aa3.94□□□□□ -1.78
LINC00393-202ENST00000452852 STXBP5Q5T5C0 1151 aa3.94□□□□□ -1.78
LINC00393-202ENST00000452852 NADSYN1Q6IA69 706 aa3.94□□□□□ -1.78
LINC00393-202ENST00000452852 CAPRIN2Q6IMN6 1127 aaKnown RBP3.94□□□□□ -1.78
LINC00393-202ENST00000452852 C8orf82Q6P1X6 216 aaPredicted RBP3.94□□□□□ -1.78
LINC00393-202ENST00000452852 NEK5Q6P3R8 708 aa3.94□□□□□ -1.78
LINC00393-202ENST00000452852 CD300LGQ6UXG3 332 aa3.94□□□□□ -1.78
LINC00393-202ENST00000452852 VITQ6UXI7 678 aa3.94□□□□□ -1.78
LINC00393-202ENST00000452852 PACS1Q6VY07 963 aa3.94□□□□□ -1.78
LINC00393-202ENST00000452852 RBM43Q6ZSC3 357 aaKnown RBP3.94□□□□□ -1.78
LINC00393-202ENST00000452852 RTN4RL2Q86UN3 420 aa3.94□□□□□ -1.78
LINC00393-202ENST00000452852 LONP2Q86WA8 852 aa3.94□□□□□ -1.78
LINC00393-202ENST00000452852 NUDT13Q86X67 352 aa3.94□□□□□ -1.78
LINC00393-202ENST00000452852 MFSD6LQ8IWD5 586 aa3.94□□□□□ -1.78
LINC00393-202ENST00000452852 LAX1Q8IWV1 398 aa3.94□□□□□ -1.78
LINC00393-202ENST00000452852 CDK20Q8IZL9 346 aa3.94□□□□□ -1.78
LINC00393-202ENST00000452852 THEM5Q8N1Q8 247 aa3.94□□□□□ -1.78
LINC00393-202ENST00000452852 CLIP4Q8N3C7 705 aa3.94□□□□□ -1.78
LINC00393-202ENST00000452852 SMYD1Q8NB12 490 aa3.94□□□□□ -1.78
LINC00393-202ENST00000452852 OR10Q1Q8NGQ4 319 aa3.94□□□□□ -1.78
LINC00393-202ENST00000452852 CCDC110Q8TBZ0 833 aa3.94□□□□□ -1.78
LINC00393-202ENST00000452852 C2orf15Q8WU43 125 aaKnown RBP3.94□□□□□ -1.78
LINC00393-202ENST00000452852 CLDN23Q96B33 292 aa3.94□□□□□ -1.78
LINC00393-202ENST00000452852 TCEAL4Q96EI5 215 aa3.94□□□□□ -1.78
LINC00393-202ENST00000452852 CFAP36Q96G28 342 aa3.94□□□□□ -1.78
LINC00393-202ENST00000452852 RBM18Q96H35 190 aaKnown RBP3.94□□□□□ -1.78
LINC00393-202ENST00000452852 SGK494Q96LW2 274 aa3.94□□□□□ -1.78
LINC00393-202ENST00000452852 NSMCE2Q96MF7 247 aa3.94□□□□□ -1.78
LINC00393-202ENST00000452852 KCNK16Q96T55 309 aa3.94□□□□□ -1.78
LINC00393-202ENST00000452852 PLA2G2FQ9BZM2 168 aa3.94□□□□□ -1.78
LINC00393-202ENST00000452852 DDX47Q9H0S4 455 aaKnown RBP3.94□□□□□ -1.78
LINC00393-202ENST00000452852 C8orf33Q9H7E9 229 aaPredicted RBP3.94□□□□□ -1.78
LINC00393-202ENST00000452852 LRRC4Q9HBW1 653 aa3.94□□□□□ -1.78
LINC00393-202ENST00000452852 ZNF334Q9HCZ1 680 aaPredicted RBP3.94□□□□□ -1.78
LINC00393-202ENST00000452852 NGBQ9NPG2 151 aa3.94□□□□□ -1.78
LINC00393-202ENST00000452852 TRPV5Q9NQA5 729 aa3.94□□□□□ -1.78
LINC00393-202ENST00000452852 ZNF701Q9NV72 531 aaPredicted RBP3.94□□□□□ -1.78
LINC00393-202ENST00000452852 DONSONQ9NYP3 566 aa3.94□□□□□ -1.78
LINC00393-202ENST00000452852 TRIM10Q9UDY6 481 aa3.94□□□□□ -1.78
LINC00393-202ENST00000452852 RALYQ9UKM9 306 aaKnown RBP3.94□□□□□ -1.78
LINC00393-202ENST00000452852 MYH10P35580 1976 aa3.94□□□□□ -1.78
LINC00393-202ENST00000452852 ANAPC1Q9H1A4 1944 aa3.93□□□□□ -1.78
LINC00393-202ENST00000452852 PIEZO1Q92508 2521 aa3.93□□□□□ -1.78
LINC00393-202ENST00000452852 KIAA1549LQ6ZVL6 1849 aa3.93□□□□□ -1.78
LINC00393-202ENST00000452852 MAGEB16A2A368 324 aa3.93□□□□□ -1.78
LINC00393-202ENST00000452852 MTMR11A4FU01 709 aa3.93□□□□□ -1.78
LINC00393-202ENST00000452852 VPS37CA5D8V6 355 aaPredicted RBP3.93□□□□□ -1.78
LINC00393-202ENST00000452852 ARHGAP42A6NI28 874 aa3.93□□□□□ -1.78
LINC00393-202ENST00000452852 C17orf105B2RV13 164 aa3.93□□□□□ -1.78
LINC00393-202ENST00000452852 PRSS44E7EML9 344 aa3.93□□□□□ -1.78
LINC00393-202ENST00000452852 PRR23D1E9PI22 279 aaPredicted RBP3.93□□□□□ -1.78
LINC00393-202ENST00000452852 CYB561D2O14569 222 aa3.93□□□□□ -1.78
LINC00393-202ENST00000452852 ACOT8O14734 319 aa3.93□□□□□ -1.78
LINC00393-202ENST00000452852 RASGRF2O14827 1237 aa3.93□□□□□ -1.78
LINC00393-202ENST00000452852 ARPC2O15144 300 aa3.93□□□□□ -1.78
LINC00393-202ENST00000452852 CHADO15335 359 aa3.93□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms