RNA–Protein interactions for RNA: ENST00000452483.1

HMGB3P21-201, Transcript of high mobility group box 3 pseudogene 21, humanhuman

BASIC

Gene HMGB3P21, Length 547 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P21-201ENST00000452483 CYLC1P35663 651 aaPredicted RBP4.09□□□□□ -1.75
HMGB3P21-201ENST00000452483 RPL21P46778 160 aaKnown RBP4.09□□□□□ -1.75
HMGB3P21-201ENST00000452483 HSPA13P48723 471 aa4.09□□□□□ -1.75
HMGB3P21-201ENST00000452483 GTF2A1P52655 376 aaPredicted RBP4.09□□□□□ -1.75
HMGB3P21-201ENST00000452483 PRPS1P60891 318 aa4.09□□□□□ -1.75
HMGB3P21-201ENST00000452483 POLR2GP62487 172 aaKnown RBP eCLIP4.09□□□□□ -1.75
HMGB3P21-201ENST00000452483 CDK16Q00536 496 aa4.09□□□□□ -1.75
HMGB3P21-201ENST00000452483 PSG6Q00889 435 aa4.09□□□□□ -1.75
HMGB3P21-201ENST00000452483 OCA2Q04671 838 aa4.09□□□□□ -1.75
HMGB3P21-201ENST00000452483 SIGLEC14Q08ET2 396 aa4.09□□□□□ -1.75
HMGB3P21-201ENST00000452483 GANABQ14697 944 aaKnown RBP4.09□□□□□ -1.75
HMGB3P21-201ENST00000452483 SYPL1Q16563 259 aa4.09□□□□□ -1.75
HMGB3P21-201ENST00000452483 DNAL1Q4LDG9 190 aa4.09□□□□□ -1.75
HMGB3P21-201ENST00000452483 NDUFAF5Q5TEU4 345 aa4.09□□□□□ -1.75
HMGB3P21-201ENST00000452483 LIPNQ5VXI9 398 aa4.09□□□□□ -1.75
HMGB3P21-201ENST00000452483 TMEM71Q6P5X7 295 aa4.09□□□□□ -1.75
HMGB3P21-201ENST00000452483 ZNF534Q76KX8 674 aa4.09□□□□□ -1.75
HMGB3P21-201ENST00000452483 SLC26A9Q7LBE3 791 aa4.09□□□□□ -1.75
HMGB3P21-201ENST00000452483 AKAP14Q86UN6 197 aa4.09□□□□□ -1.75
HMGB3P21-201ENST00000452483 SATL1Q86VE3 508 aa4.09□□□□□ -1.75
HMGB3P21-201ENST00000452483 TMC8Q8IU68 726 aa4.09□□□□□ -1.75
HMGB3P21-201ENST00000452483 HIST2H2ABQ8IUE6 130 aaPredicted RBP4.09□□□□□ -1.75
HMGB3P21-201ENST00000452483 SYT12Q8IV01 421 aa4.09□□□□□ -1.75
HMGB3P21-201ENST00000452483 TDHQ8IZJ6 230 aa4.09□□□□□ -1.75
HMGB3P21-201ENST00000452483 ZNF276Q8N554 614 aa4.09□□□□□ -1.75
HMGB3P21-201ENST00000452483 CNBD1Q8NA66 436 aa4.09□□□□□ -1.75
HMGB3P21-201ENST00000452483 MLKLQ8NB16 471 aa4.09□□□□□ -1.75
HMGB3P21-201ENST00000452483 DDHD1Q8NEL9 900 aa4.09□□□□□ -1.75
HMGB3P21-201ENST00000452483 TTLQ8NG68 377 aa4.09□□□□□ -1.75
HMGB3P21-201ENST00000452483 OR13C3Q8NGS6 347 aa4.09□□□□□ -1.75
HMGB3P21-201ENST00000452483 OR52I2Q8NH67 350 aa4.09□□□□□ -1.75
HMGB3P21-201ENST00000452483 HIST1H2ACQ93077 130 aa4.09□□□□□ -1.75
HMGB3P21-201ENST00000452483 LGALS12Q96DT0 336 aa4.09□□□□□ -1.75
HMGB3P21-201ENST00000452483 MTERF3Q96E29 417 aa4.09□□□□□ -1.75
HMGB3P21-201ENST00000452483 MRPL53Q96EL3 112 aaKnown RBP4.09□□□□□ -1.75
HMGB3P21-201ENST00000452483 SH3YL1Q96HL8 342 aaPredicted RBP4.09□□□□□ -1.75
HMGB3P21-201ENST00000452483 AKR1E2Q96JD6 320 aa4.09□□□□□ -1.75
HMGB3P21-201ENST00000452483 CCDC17Q96LX7 622 aa4.09□□□□□ -1.75
HMGB3P21-201ENST00000452483 DEFB118Q96PH6 123 aa4.09□□□□□ -1.75
HMGB3P21-201ENST00000452483 ADOQ96SZ5 270 aa4.09□□□□□ -1.75
HMGB3P21-201ENST00000452483 COPS8Q99627 209 aa4.09□□□□□ -1.75
HMGB3P21-201ENST00000452483 NAPGQ99747 312 aaPredicted RBP4.09□□□□□ -1.75
HMGB3P21-201ENST00000452483 PRMT1Q99873 361 aaKnown RBP4.09□□□□□ -1.75
HMGB3P21-201ENST00000452483 TTYH2Q9BSA4 534 aa4.09□□□□□ -1.75
HMGB3P21-201ENST00000452483 MED10Q9BTT4 135 aa4.09□□□□□ -1.75
HMGB3P21-201ENST00000452483 DPH7Q9BTV6 452 aa4.09□□□□□ -1.75
HMGB3P21-201ENST00000452483 FUNDC2Q9BWH2 189 aa4.09□□□□□ -1.75
HMGB3P21-201ENST00000452483 ANGPTL4Q9BY76 406 aa4.09□□□□□ -1.75
HMGB3P21-201ENST00000452483 POTEKPQ9BYX7 375 aa4.09□□□□□ -1.75
HMGB3P21-201ENST00000452483 SLITRK6Q9H5Y7 841 aa4.09□□□□□ -1.75
HMGB3P21-201ENST00000452483 PPP1R3EQ9H7J1 279 aa4.09□□□□□ -1.75
HMGB3P21-201ENST00000452483 PHPT1Q9NRX4 125 aaPredicted RBP4.09□□□□□ -1.75
HMGB3P21-201ENST00000452483 ZFP57Q9NU63 452 aa4.09□□□□□ -1.75
HMGB3P21-201ENST00000452483 DLL3Q9NYJ7 618 aa4.09□□□□□ -1.75
HMGB3P21-201ENST00000452483 PTTG2Q9NZH5 202 aa4.09□□□□□ -1.75
HMGB3P21-201ENST00000452483 C1RLQ9NZP8 487 aa4.09□□□□□ -1.75
HMGB3P21-201ENST00000452483 EPHA6Q9UF33 1036 aa4.09□□□□□ -1.75
HMGB3P21-201ENST00000452483 TTC7AQ9ULT0 858 aaPredicted RBP4.09□□□□□ -1.75
HMGB3P21-201ENST00000452483 NFE2L3Q9Y4A8 694 aa4.09□□□□□ -1.75
HMGB3P21-201ENST00000452483 ZMYM6O95789 1325 aa4.09□□□□□ -1.75
HMGB3P21-201ENST00000452483 PPIAL4CA0A0B4J2A2 164 aa4.08□□□□□ -1.76
HMGB3P21-201ENST00000452483 TRBV11-1A0A0K0K1C0 115 aa4.08□□□□□ -1.76
HMGB3P21-201ENST00000452483 PRSS51A0A1B0GVH4 220 aa4.08□□□□□ -1.76
HMGB3P21-201ENST00000452483 NPIPA3F8WFD2 350 aa4.08□□□□□ -1.76
HMGB3P21-201ENST00000452483 FBP2O00757 339 aa4.08□□□□□ -1.76
HMGB3P21-201ENST00000452483 GPR171O14626 319 aa4.08□□□□□ -1.76
HMGB3P21-201ENST00000452483 BUD23O43709 281 aaKnown RBP4.08□□□□□ -1.76
HMGB3P21-201ENST00000452483 SNX3O60493 162 aa4.08□□□□□ -1.76
HMGB3P21-201ENST00000452483 ZFPL1O95159 310 aa4.08□□□□□ -1.76
HMGB3P21-201ENST00000452483 GSTA2P09210 222 aa4.08□□□□□ -1.76
HMGB3P21-201ENST00000452483 PPIAL4GP0DN37 164 aa4.08□□□□□ -1.76
HMGB3P21-201ENST00000452483 FGF5P12034 268 aa4.08□□□□□ -1.76
HMGB3P21-201ENST00000452483 MLNP12872 115 aa4.08□□□□□ -1.76
HMGB3P21-201ENST00000452483 IRF2P14316 349 aa4.08□□□□□ -1.76
HMGB3P21-201ENST00000452483 ETS2P15036 469 aa4.08□□□□□ -1.76
HMGB3P21-201ENST00000452483 GOT1P17174 413 aa4.08□□□□□ -1.76
HMGB3P21-201ENST00000452483 HOXB8P17481 243 aaPredicted RBP4.08□□□□□ -1.76
HMGB3P21-201ENST00000452483 PSMB6P28072 239 aa4.08□□□□□ -1.76
HMGB3P21-201ENST00000452483 GTF2E2P29084 291 aaKnown RBP4.08□□□□□ -1.76
HMGB3P21-201ENST00000452483 CTGFP29279 349 aa4.08□□□□□ -1.76
HMGB3P21-201ENST00000452483 MMP12P39900 470 aa4.08□□□□□ -1.76
HMGB3P21-201ENST00000452483 CBX5P45973 191 aa4.08□□□□□ -1.76
HMGB3P21-201ENST00000452483 UQCRFS1P47985 274 aa4.08□□□□□ -1.76
HMGB3P21-201ENST00000452483 METAP2P50579 478 aaKnown RBP eCLIP4.08□□□□□ -1.76
HMGB3P21-201ENST00000452483 COPB1P53618 953 aaKnown RBP4.08□□□□□ -1.76
HMGB3P21-201ENST00000452483 PSMD4P55036 377 aaKnown RBP4.08□□□□□ -1.76
HMGB3P21-201ENST00000452483 CD81P60033 236 aa4.08□□□□□ -1.76
HMGB3P21-201ENST00000452483 RAB14P61106 215 aa4.08□□□□□ -1.76
HMGB3P21-201ENST00000452483 ZXDBP98169 803 aa4.08□□□□□ -1.76
HMGB3P21-201ENST00000452483 GUCY1B3Q02153 619 aa4.08□□□□□ -1.76
HMGB3P21-201ENST00000452483 NHLH2Q02577 135 aa4.08□□□□□ -1.76
HMGB3P21-201ENST00000452483 CFHR3Q02985 330 aa4.08□□□□□ -1.76
HMGB3P21-201ENST00000452483 ZFP36L1Q07352 338 aaKnown RBP4.08□□□□□ -1.76
HMGB3P21-201ENST00000452483 MYBPHQ13203 477 aa4.08□□□□□ -1.76
HMGB3P21-201ENST00000452483 PEX6Q13608 980 aa4.08□□□□□ -1.76
HMGB3P21-201ENST00000452483 HNF4GQ14541 408 aa4.08□□□□□ -1.76
HMGB3P21-201ENST00000452483 MFSD13AQ14CX5 517 aa4.08□□□□□ -1.76
HMGB3P21-201ENST00000452483 VAMP3Q15836 100 aa4.08□□□□□ -1.76
HMGB3P21-201ENST00000452483 KNOP1Q1ED39 458 aaKnown RBP4.08□□□□□ -1.76
HMGB3P21-201ENST00000452483 C18orf21Q32NC0 220 aaPredicted RBP4.08□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms