RNA–Protein interactions for RNA: ENST00000452372.1

COL9A3-202, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 5

Gene COL9A3, Length 596 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-202ENST00000452372 ZGRF1Q86YA3 2104 aa18.5■□□□□ 0.55
COL9A3-202ENST00000452372 PRAMEF2O60811 474 aa18.49■□□□□ 0.55
COL9A3-202ENST00000452372 PEX11AO75192 247 aa18.49■□□□□ 0.55
COL9A3-202ENST00000452372 CLPSP04118 112 aa18.49■□□□□ 0.55
COL9A3-202ENST00000452372 JUNP05412 331 aaKnown RBP18.49■□□□□ 0.55
COL9A3-202ENST00000452372 SDC1P18827 310 aa18.49■□□□□ 0.55
COL9A3-202ENST00000452372 S1PR1P21453 382 aa18.49■□□□□ 0.55
COL9A3-202ENST00000452372 CYB561P49447 251 aa18.49■□□□□ 0.55
COL9A3-202ENST00000452372 HK2P52789 917 aa18.49■□□□□ 0.55
COL9A3-202ENST00000452372 SLC37A1P57057 533 aa18.49■□□□□ 0.55
COL9A3-202ENST00000452372 OC90Q02509 493 aaPredicted RBP18.49■□□□□ 0.55
COL9A3-202ENST00000452372 DUSP2Q05923 314 aa18.49■□□□□ 0.55
COL9A3-202ENST00000452372 OR1C1Q15619 314 aa18.49■□□□□ 0.55
COL9A3-202ENST00000452372 ATP6AP1LQ52LC2 224 aa18.49■□□□□ 0.55
COL9A3-202ENST00000452372 C6orf163Q5TEZ5 329 aa18.49■□□□□ 0.55
COL9A3-202ENST00000452372 TICAM1Q8IUC6 712 aa18.49■□□□□ 0.55
COL9A3-202ENST00000452372 C9orf40Q8IXQ3 194 aa18.49■□□□□ 0.55
COL9A3-202ENST00000452372 CCDC116Q8IYX3 515 aa18.49■□□□□ 0.55
COL9A3-202ENST00000452372 HORMAD2Q8N7B1 307 aa18.49■□□□□ 0.55
COL9A3-202ENST00000452372 MDS2Q8NDY4 140 aa18.49■□□□□ 0.55
COL9A3-202ENST00000452372 SSC4DQ8WTU2 575 aa18.49■□□□□ 0.55
COL9A3-202ENST00000452372 SIGLEC12Q96PQ1 595 aa18.49■□□□□ 0.55
COL9A3-202ENST00000452372 MIEF1Q9NQG6 463 aa18.49■□□□□ 0.55
COL9A3-202ENST00000452372 GIMAP4Q9NUV9 329 aa18.49■□□□□ 0.55
COL9A3-202ENST00000452372 PNPOQ9NVS9 261 aa18.49■□□□□ 0.55
COL9A3-202ENST00000452372 MAT2BQ9NZL9 334 aa18.49■□□□□ 0.55
COL9A3-202ENST00000452372 LRFN1Q9P244 771 aa18.49■□□□□ 0.55
COL9A3-202ENST00000452372 GIMAP2Q9UG22 337 aa18.49■□□□□ 0.55
COL9A3-202ENST00000452372 PCDHGB6Q9Y5F9 930 aa18.49■□□□□ 0.55
COL9A3-202ENST00000452372 DIDO1Q9BTC0 2240 aaKnown RBP18.48■□□□□ 0.55
COL9A3-202ENST00000452372 WIPF3A6NGB9 483 aa18.48■□□□□ 0.55
COL9A3-202ENST00000452372 OR6C76A6NM76 312 aa18.48■□□□□ 0.55
COL9A3-202ENST00000452372 WWP2O00308 870 aa18.48■□□□□ 0.55
COL9A3-202ENST00000452372 OR2J2O76002 312 aa18.48■□□□□ 0.55
COL9A3-202ENST00000452372 NEURL1O76050 574 aa18.48■□□□□ 0.55
COL9A3-202ENST00000452372 BCKDHAP12694 445 aa18.48■□□□□ 0.55
COL9A3-202ENST00000452372 MAPK1P28482 360 aa18.48■□□□□ 0.55
COL9A3-202ENST00000452372 SSTR4P31391 388 aa18.48■□□□□ 0.55
COL9A3-202ENST00000452372 SSR4P51571 173 aa18.48■□□□□ 0.55
COL9A3-202ENST00000452372 PDCD2Q16342 344 aaPredicted RBP18.48■□□□□ 0.55
COL9A3-202ENST00000452372 MPEG1Q2M385 716 aa18.48■□□□□ 0.55
COL9A3-202ENST00000452372 SPINK14Q6IE38 97 aa18.48■□□□□ 0.55
COL9A3-202ENST00000452372 C16orf47Q6ZP98 133 aaPredicted RBP18.48■□□□□ 0.55
COL9A3-202ENST00000452372 SLC29A4Q7RTT9 530 aa18.48■□□□□ 0.55
COL9A3-202ENST00000452372 TMEM156Q8N614 296 aa18.48■□□□□ 0.55
COL9A3-202ENST00000452372 OR7G1Q8NGA0 311 aa18.48■□□□□ 0.55
COL9A3-202ENST00000452372 CTHRC1Q96CG8 243 aa18.48■□□□□ 0.55
COL9A3-202ENST00000452372 TUBGCP3Q96CW5 907 aa18.48■□□□□ 0.55
COL9A3-202ENST00000452372 BRINP2Q9C0B6 783 aa18.48■□□□□ 0.55
COL9A3-202ENST00000452372 PLEKHB1Q9UF11 243 aaPredicted RBP18.48■□□□□ 0.55
COL9A3-202ENST00000452372 BAIAP2L1Q9UHR4 511 aa18.48■□□□□ 0.55
COL9A3-202ENST00000452372 ZNF639Q9UID6 485 aa18.48■□□□□ 0.55
COL9A3-202ENST00000452372 ENTPD4Q9Y227 616 aa18.48■□□□□ 0.55
COL9A3-202ENST00000452372 CRYBG3Q68DQ2 2970 aa18.47■□□□□ 0.55
COL9A3-202ENST00000452372 MYO1GB0I1T2 1018 aa18.47■□□□□ 0.55
COL9A3-202ENST00000452372 KLF11O14901 512 aa18.47■□□□□ 0.55
COL9A3-202ENST00000452372 MPIP34949 423 aa18.47■□□□□ 0.55
COL9A3-202ENST00000452372 SOX18P35713 384 aa18.47■□□□□ 0.55
COL9A3-202ENST00000452372 ASMTP46597 345 aa18.47■□□□□ 0.55
COL9A3-202ENST00000452372 PRSS53Q2L4Q9 553 aa18.47■□□□□ 0.55
COL9A3-202ENST00000452372 ZNF766Q5HY98 468 aa18.47■□□□□ 0.55
COL9A3-202ENST00000452372 FAM111BQ6SJ93 734 aa18.47■□□□□ 0.55
COL9A3-202ENST00000452372 ZNF227Q86WZ6 799 aa18.47■□□□□ 0.55
COL9A3-202ENST00000452372 VWA5B2Q8N398 1253 aa18.47■□□□□ 0.55
COL9A3-202ENST00000452372 ZNF615Q8N8J6 731 aa18.47■□□□□ 0.55
COL9A3-202ENST00000452372 ADCY4Q8NFM4 1077 aa18.47■□□□□ 0.55
COL9A3-202ENST00000452372 PRR7Q8TB68 274 aa18.47■□□□□ 0.55
COL9A3-202ENST00000452372 ZNF675Q8TD23 568 aa18.47■□□□□ 0.55
COL9A3-202ENST00000452372 ZNF764Q96H86 408 aaPredicted RBP18.47■□□□□ 0.55
COL9A3-202ENST00000452372 TSSK3Q96PN8 268 aa18.47■□□□□ 0.55
COL9A3-202ENST00000452372 BBS4Q96RK4 519 aa18.47■□□□□ 0.55
COL9A3-202ENST00000452372 RASL10BQ96S79 203 aa18.47■□□□□ 0.55
COL9A3-202ENST00000452372 OR10A5Q9H207 317 aa18.47■□□□□ 0.55
COL9A3-202ENST00000452372 COPG1Q9Y678 874 aaKnown RBP18.47■□□□□ 0.55
COL9A3-202ENST00000452372 CELSR2Q9HCU4 2923 aa18.47■□□□□ 0.55
COL9A3-202ENST00000452372 TBX19O60806 448 aa18.46■□□□□ 0.55
COL9A3-202ENST00000452372 CD46P15529 392 aa18.46■□□□□ 0.55
COL9A3-202ENST00000452372 PTGER1P34995 402 aa18.46■□□□□ 0.55
COL9A3-202ENST00000452372 OCRLQ01968 901 aa18.46■□□□□ 0.55
COL9A3-202ENST00000452372 EMX2Q04743 252 aa18.46■□□□□ 0.55
COL9A3-202ENST00000452372 EBPQ15125 230 aaKnown RBP18.46■□□□□ 0.55
COL9A3-202ENST00000452372 SMU1Q2TAY7 513 aa18.46■□□□□ 0.55
COL9A3-202ENST00000452372 C4orf17Q53FE4 359 aa18.46■□□□□ 0.55
COL9A3-202ENST00000452372 PIGGQ5H8A4 983 aa18.46■□□□□ 0.55
COL9A3-202ENST00000452372 SLC25A25Q6KCM7 469 aa18.46■□□□□ 0.55
COL9A3-202ENST00000452372 FNDC5Q8NAU1 212 aa18.46■□□□□ 0.55
COL9A3-202ENST00000452372 ZNF75CPQ92670 426 aaPredicted RBP18.46■□□□□ 0.55
COL9A3-202ENST00000452372 GFM2Q969S9 779 aaKnown RBP18.46■□□□□ 0.55
COL9A3-202ENST00000452372 SCMH1Q96GD3 660 aa18.46■□□□□ 0.55
COL9A3-202ENST00000452372 WWTR1Q9GZV5 400 aa18.46■□□□□ 0.55
COL9A3-202ENST00000452372 REEP4Q9H6H4 257 aa18.46■□□□□ 0.55
COL9A3-202ENST00000452372 AKTIPQ9H8T0 292 aa18.46■□□□□ 0.55
COL9A3-202ENST00000452372 RYDENQ9NUL5 291 aaKnown RBP18.46■□□□□ 0.55
COL9A3-202ENST00000452372 ZNF446Q9NWS9 450 aa18.46■□□□□ 0.55
COL9A3-202ENST00000452372 MAP10Q9P2G4 905 aa18.46■□□□□ 0.55
COL9A3-202ENST00000452372 SP1P08047 785 aa18.45■□□□□ 0.54
COL9A3-202ENST00000452372 PRPS2P11908 318 aa18.45■□□□□ 0.54
COL9A3-202ENST00000452372 PPP2R2AP63151 447 aa18.45■□□□□ 0.54
COL9A3-202ENST00000452372 MAD2L1Q13257 205 aaPredicted RBP18.45■□□□□ 0.54
COL9A3-202ENST00000452372 PDE7AQ13946 482 aa18.45■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms