RNA–Protein interactions for RNA: ENST00000447232.6

PMS1-215, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 2 BASIC

Gene PMS1, Length 2,576 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-215ENST00000447232 PPP1R12AO14974 1030 aaPredicted RBP2.89□□□□□ -1.95
PMS1-215ENST00000447232 CHST10O43529 356 aa2.89□□□□□ -1.95
PMS1-215ENST00000447232 TRAPPC6AO75865 159 aa2.89□□□□□ -1.95
PMS1-215ENST00000447232 FTH1P02794 183 aa2.89□□□□□ -1.95
PMS1-215ENST00000447232 CYP1A2P05177 515 aa2.89□□□□□ -1.95
PMS1-215ENST00000447232 CD48P09326 243 aa2.89□□□□□ -1.95
PMS1-215ENST00000447232 NUDT17P0C025 328 aa2.89□□□□□ -1.95
PMS1-215ENST00000447232 PRSS56P0CW18 603 aa2.89□□□□□ -1.95
PMS1-215ENST00000447232 PEPDP12955 493 aa2.89□□□□□ -1.95
PMS1-215ENST00000447232 UCHL3P15374 230 aa2.89□□□□□ -1.95
PMS1-215ENST00000447232 TTKP33981 857 aa2.89□□□□□ -1.95
PMS1-215ENST00000447232 PDLIM4P50479 330 aa2.89□□□□□ -1.95
PMS1-215ENST00000447232 PRDX1Q06830 199 aaKnown RBP2.89□□□□□ -1.95
PMS1-215ENST00000447232 MSLNQ13421 630 aaPredicted RBP2.89□□□□□ -1.95
PMS1-215ENST00000447232 TAF1AQ15573 450 aaPredicted RBP2.89□□□□□ -1.95
PMS1-215ENST00000447232 MPEG1Q2M385 716 aa2.89□□□□□ -1.95
PMS1-215ENST00000447232 SYTL3Q4VX76 610 aa2.89□□□□□ -1.95
PMS1-215ENST00000447232 OR2A2Q6IF42 318 aa2.89□□□□□ -1.95
PMS1-215ENST00000447232 SBSNQ6UWP8 590 aa2.89□□□□□ -1.95
PMS1-215ENST00000447232 PACS1Q6VY07 963 aa2.89□□□□□ -1.95
PMS1-215ENST00000447232 HSDL2Q6YN16 418 aa2.89□□□□□ -1.95
PMS1-215ENST00000447232 SERPINA9Q86WD7 417 aa2.89□□□□□ -1.95
PMS1-215ENST00000447232 GRAMD2AQ8IUY3 354 aa2.89□□□□□ -1.95
PMS1-215ENST00000447232 PLD3Q8IV08 490 aa2.89□□□□□ -1.95
PMS1-215ENST00000447232 MCOLN2Q8IZK6 566 aa2.89□□□□□ -1.95
PMS1-215ENST00000447232 SLC25A41Q8N5S1 370 aa2.89□□□□□ -1.95
PMS1-215ENST00000447232 OR13C4Q8NGS5 318 aa2.89□□□□□ -1.95
PMS1-215ENST00000447232 SPACA9Q96E40 222 aaPredicted RBP2.89□□□□□ -1.95
PMS1-215ENST00000447232 ZNF597Q96LX8 424 aa2.89□□□□□ -1.95
PMS1-215ENST00000447232 JSRP1Q96MG2 331 aaPredicted RBP2.89□□□□□ -1.95
PMS1-215ENST00000447232 FOXN4Q96NZ1 517 aa2.89□□□□□ -1.95
PMS1-215ENST00000447232 CCT8L2Q96SF2 557 aa2.89□□□□□ -1.95
PMS1-215ENST00000447232 ACTR6Q9GZN1 396 aa2.89□□□□□ -1.95
PMS1-215ENST00000447232 GLOD4Q9HC38 313 aa2.89□□□□□ -1.95
PMS1-215ENST00000447232 UTP6Q9NYH9 597 aaKnown RBP2.89□□□□□ -1.95
PMS1-215ENST00000447232 CNIH4Q9P003 139 aa2.89□□□□□ -1.95
PMS1-215ENST00000447232 C15orf41Q9Y2V0 281 aa2.89□□□□□ -1.95
PMS1-215ENST00000447232 MMP24Q9Y5R2 645 aa2.89□□□□□ -1.95
PMS1-215ENST00000447232 ARFGEF3Q5TH69 2177 aa2.89□□□□□ -1.95
PMS1-215ENST00000447232 LCE6AA0A183 80 aa2.89□□□□□ -1.95
PMS1-215ENST00000447232 BICDL2A1A5D9 508 aa2.89□□□□□ -1.95
PMS1-215ENST00000447232 DPRXA6NFQ7 191 aa2.89□□□□□ -1.95
PMS1-215ENST00000447232 CCT8L1PA6NM43 557 aa2.89□□□□□ -1.95
PMS1-215ENST00000447232 PLOD2O00469 737 aa2.89□□□□□ -1.95
PMS1-215ENST00000447232 GALR3O60755 368 aaPredicted RBP2.89□□□□□ -1.95
PMS1-215ENST00000447232 RAMP1O60894 148 aa2.89□□□□□ -1.95
PMS1-215ENST00000447232 PDE5AO76074 875 aa2.89□□□□□ -1.95
PMS1-215ENST00000447232 GFPT2O94808 682 aa2.89□□□□□ -1.95
PMS1-215ENST00000447232 C1orf105O95561 183 aa2.89□□□□□ -1.95
PMS1-215ENST00000447232 TACSTD2P09758 323 aa2.89□□□□□ -1.95
PMS1-215ENST00000447232 PSMB1P20618 241 aaKnown RBP2.89□□□□□ -1.95
PMS1-215ENST00000447232 PPP2R1BP30154 601 aa2.89□□□□□ -1.95
PMS1-215ENST00000447232 CCR7P32248 378 aa2.89□□□□□ -1.95
PMS1-215ENST00000447232 PPP1R2P41236 205 aa2.89□□□□□ -1.95
PMS1-215ENST00000447232 ZNF140P52738 457 aaPredicted RBP2.89□□□□□ -1.95
PMS1-215ENST00000447232 C21orf58P58505 322 aa2.89□□□□□ -1.95
PMS1-215ENST00000447232 BSPH1Q075Z2 132 aa2.89□□□□□ -1.95
PMS1-215ENST00000447232 MAP4K2Q12851 820 aa2.89□□□□□ -1.95
PMS1-215ENST00000447232 STIM1Q13586 685 aa2.89□□□□□ -1.95
PMS1-215ENST00000447232 FGFBP1Q14512 234 aa2.89□□□□□ -1.95
PMS1-215ENST00000447232 ZNHIT3Q15649 155 aaPredicted RBP2.89□□□□□ -1.95
PMS1-215ENST00000447232 CYP1B1Q16678 543 aa2.89□□□□□ -1.95
PMS1-215ENST00000447232 PIGGQ5H8A4 983 aa2.89□□□□□ -1.95
PMS1-215ENST00000447232 HECTD2Q5U5R9 776 aa2.89□□□□□ -1.95
PMS1-215ENST00000447232 ICE2Q659A1 982 aa2.89□□□□□ -1.95
PMS1-215ENST00000447232 ASPHD2Q6ICH7 369 aa2.89□□□□□ -1.95
PMS1-215ENST00000447232 ZNF793Q6ZN11 406 aa2.89□□□□□ -1.95
PMS1-215ENST00000447232 CDKL3Q8IVW4 592 aaPredicted RBP2.89□□□□□ -1.95
PMS1-215ENST00000447232 PIANPQ8IYJ0 282 aa2.89□□□□□ -1.95
PMS1-215ENST00000447232 Q8N1X5 172 aa2.89□□□□□ -1.95
PMS1-215ENST00000447232 KLHL36Q8N4N3 616 aa2.89□□□□□ -1.95
PMS1-215ENST00000447232 CCNYQ8ND76 341 aa2.89□□□□□ -1.95
PMS1-215ENST00000447232 CFAP61Q8NHU2 1237 aa2.89□□□□□ -1.95
PMS1-215ENST00000447232 MAGEC3Q8TD91 643 aa2.89□□□□□ -1.95
PMS1-215ENST00000447232 NELFBQ8WX92 580 aa2.89□□□□□ -1.95
PMS1-215ENST00000447232 PDLIM2Q96JY6 352 aa2.89□□□□□ -1.95
PMS1-215ENST00000447232 SLC6A7Q99884 636 aa2.89□□□□□ -1.95
PMS1-215ENST00000447232 DOHHQ9BU89 302 aa2.89□□□□□ -1.95
PMS1-215ENST00000447232 BPESC1Q9GZL8 116 aa2.89□□□□□ -1.95
PMS1-215ENST00000447232 DDX28Q9NUL7 540 aaKnown RBP2.89□□□□□ -1.95
PMS1-215ENST00000447232 SPATA7Q9P0W8 599 aa2.89□□□□□ -1.95
PMS1-215ENST00000447232 FAM153AQ9UHL3 310 aa2.89□□□□□ -1.95
PMS1-215ENST00000447232 DLGAP4Q9Y2H0 992 aa2.89□□□□□ -1.95
PMS1-215ENST00000447232 ZDHHC9Q9Y397 364 aa2.89□□□□□ -1.95
PMS1-215ENST00000447232 KIAA1109Q2LD37 5005 aa2.88□□□□□ -1.95
PMS1-215ENST00000447232 A0A0A6YYK5 440 aaPredicted RBP2.88□□□□□ -1.95
PMS1-215ENST00000447232 LOC390937A0A1W2PQ73 354 aa2.88□□□□□ -1.95
PMS1-215ENST00000447232 C5orf60A6NFR6 353 aa2.88□□□□□ -1.95
PMS1-215ENST00000447232 C3orf84H3BNL1 204 aa2.88□□□□□ -1.95
PMS1-215ENST00000447232 H7C0S8 307 aa2.88□□□□□ -1.95
PMS1-215ENST00000447232 TIMM23O14925 209 aa2.88□□□□□ -1.95
PMS1-215ENST00000447232 PLXNB1O43157 2135 aa2.88□□□□□ -1.95
PMS1-215ENST00000447232 MDKP21741 143 aaPredicted RBP2.88□□□□□ -1.95
PMS1-215ENST00000447232 BDKRB1P46663 353 aa2.88□□□□□ -1.95
PMS1-215ENST00000447232 LHX2P50458 406 aa2.88□□□□□ -1.95
PMS1-215ENST00000447232 CLDN18P56856 261 aa2.88□□□□□ -1.95
PMS1-215ENST00000447232 SIRPAP78324 504 aa2.88□□□□□ -1.95
PMS1-215ENST00000447232 OLR1P78380 273 aa2.88□□□□□ -1.95
PMS1-215ENST00000447232 SLC25A11Q02978 314 aaKnown RBP2.88□□□□□ -1.95
PMS1-215ENST00000447232 HSPA14Q0VDF9 509 aa2.88□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms