RNA–Protein interactions for RNA: ENST00000446876.1

HDAC4-204, Transcript of histone deacetylase 4, humanhuman

TSL 4

Gene HDAC4, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-204ENST00000446876 EGLN2Q96KS0 407 aa13.72□□□□□ -0.21
HDAC4-204ENST00000446876 PAIP2Q9BPZ3 127 aaKnown RBP13.72□□□□□ -0.21
HDAC4-204ENST00000446876 OR10A5Q9H207 317 aa13.72□□□□□ -0.21
HDAC4-204ENST00000446876 MYNNQ9NPC7 610 aa13.72□□□□□ -0.21
HDAC4-204ENST00000446876 DEPPQ9NTK1 212 aa13.72□□□□□ -0.21
HDAC4-204ENST00000446876 SDAD1Q9NVU7 687 aaKnown RBP eCLIP13.72□□□□□ -0.21
HDAC4-204ENST00000446876 PSME2Q9UL46 239 aa13.72□□□□□ -0.21
HDAC4-204ENST00000446876 EXO1Q9UQ84 846 aaKnown RBP13.72□□□□□ -0.21
HDAC4-204ENST00000446876 DTX4Q9Y2E6 619 aa13.72□□□□□ -0.21
HDAC4-204ENST00000446876 ATP6AP2A0A1C7CYW4 349 aa13.71□□□□□ -0.21
HDAC4-204ENST00000446876 TMEM120BA0PK00 339 aa13.71□□□□□ -0.21
HDAC4-204ENST00000446876 ASPDHA6ND91 283 aa13.71□□□□□ -0.21
HDAC4-204ENST00000446876 NPIPB8E9PQR5 432 aa13.71□□□□□ -0.21
HDAC4-204ENST00000446876 CDK2AP1O14519 115 aa13.71□□□□□ -0.21
HDAC4-204ENST00000446876 LSM1O15116 133 aaKnown RBP13.71□□□□□ -0.21
HDAC4-204ENST00000446876 BIRC5O15392 142 aa13.71□□□□□ -0.21
HDAC4-204ENST00000446876 NME6O75414 186 aaPredicted RBP13.71□□□□□ -0.21
HDAC4-204ENST00000446876 ATP6AP2O75787 350 aa13.71□□□□□ -0.21
HDAC4-204ENST00000446876 CRYABP02511 175 aaKnown RBP13.71□□□□□ -0.21
HDAC4-204ENST00000446876 JUNP05412 331 aaKnown RBP13.71□□□□□ -0.21
HDAC4-204ENST00000446876 NEFHP12036 1026 aa13.71□□□□□ -0.21
HDAC4-204ENST00000446876 EDN3P14138 238 aa13.71□□□□□ -0.21
HDAC4-204ENST00000446876 PCSK2P16519 638 aa13.71□□□□□ -0.21
HDAC4-204ENST00000446876 DDCP20711 480 aa13.71□□□□□ -0.21
HDAC4-204ENST00000446876 MAGOHP61326 146 aaKnown RBP13.71□□□□□ -0.21
HDAC4-204ENST00000446876 ELOAQ14241 798 aaKnown RBP13.71□□□□□ -0.21
HDAC4-204ENST00000446876 MPEG1Q2M385 716 aa13.71□□□□□ -0.21
HDAC4-204ENST00000446876 RFTN2Q52LD8 501 aaPredicted RBP13.71□□□□□ -0.21
HDAC4-204ENST00000446876 TRMT12Q53H54 448 aaKnown RBP13.71□□□□□ -0.21
HDAC4-204ENST00000446876 RNFT1Q5M7Z0 435 aa13.71□□□□□ -0.21
HDAC4-204ENST00000446876 ANKRD26P1Q6NSI1 321 aa13.71□□□□□ -0.21
HDAC4-204ENST00000446876 LYPD8Q6UX82 237 aa13.71□□□□□ -0.21
HDAC4-204ENST00000446876 RNF165Q6ZSG1 346 aa13.71□□□□□ -0.21
HDAC4-204ENST00000446876 SULF2Q8IWU5 870 aa13.71□□□□□ -0.21
HDAC4-204ENST00000446876 ZNF441Q8N8Z8 693 aa13.71□□□□□ -0.21
HDAC4-204ENST00000446876 PSD4Q8NDX1 1056 aa13.71□□□□□ -0.21
HDAC4-204ENST00000446876 DNAJB8Q8NHS0 232 aa13.71□□□□□ -0.21
HDAC4-204ENST00000446876 FAM76AQ8TAV0 307 aa13.71□□□□□ -0.21
HDAC4-204ENST00000446876 KAT2AQ92830 837 aa13.71□□□□□ -0.21
HDAC4-204ENST00000446876 TLCD1Q96CP7 247 aa13.71□□□□□ -0.21
HDAC4-204ENST00000446876 FCRL1Q96LA6 429 aa13.71□□□□□ -0.21
HDAC4-204ENST00000446876 C3orf30Q96M34 536 aa13.71□□□□□ -0.21
HDAC4-204ENST00000446876 C20orf27Q9GZN8 174 aa13.71□□□□□ -0.21
HDAC4-204ENST00000446876 ANKRA2Q9H9E1 313 aa13.71□□□□□ -0.21
HDAC4-204ENST00000446876 TIMMDC1Q9NPL8 285 aa13.71□□□□□ -0.21
HDAC4-204ENST00000446876 SLC35C2Q9NQQ7 365 aa13.71□□□□□ -0.21
HDAC4-204ENST00000446876 BCAP29Q9UHQ4 241 aa13.71□□□□□ -0.21
HDAC4-204ENST00000446876 ENTPD4Q9Y227 616 aa13.71□□□□□ -0.21
HDAC4-204ENST00000446876 KLF13Q9Y2Y9 288 aaPredicted RBP13.71□□□□□ -0.21
HDAC4-204ENST00000446876 HIVEP3Q5T1R4 2406 aa13.71□□□□□ -0.22
HDAC4-204ENST00000446876 C2orf92A0A1B0GVN3 265 aa13.7□□□□□ -0.22
HDAC4-204ENST00000446876 CLEC18AA5D8T8 446 aa13.7□□□□□ -0.22
HDAC4-204ENST00000446876 PINLYPA6NC86 204 aa13.7□□□□□ -0.22
HDAC4-204ENST00000446876 OR6C76A6NM76 312 aa13.7□□□□□ -0.22
HDAC4-204ENST00000446876 AKAP10O43572 662 aa13.7□□□□□ -0.22
HDAC4-204ENST00000446876 PEX1O43933 1283 aa13.7□□□□□ -0.22
HDAC4-204ENST00000446876 SEMA7AO75326 666 aa13.7□□□□□ -0.22
HDAC4-204ENST00000446876 LRATO95237 230 aa13.7□□□□□ -0.22
HDAC4-204ENST00000446876 CBX7O95931 251 aa13.7□□□□□ -0.22
HDAC4-204ENST00000446876 CCL3P10147 92 aa13.7□□□□□ -0.22
HDAC4-204ENST00000446876 SDC1P18827 310 aa13.7□□□□□ -0.22
HDAC4-204ENST00000446876 GSTM5P46439 218 aa13.7□□□□□ -0.22
HDAC4-204ENST00000446876 NR0B1P51843 470 aaKnown RBP13.7□□□□□ -0.22
HDAC4-204ENST00000446876 WDR4P57081 412 aaKnown RBP13.7□□□□□ -0.22
HDAC4-204ENST00000446876 ABCE1P61221 599 aaKnown RBP13.7□□□□□ -0.22
HDAC4-204ENST00000446876 ALDH6A1Q02252 535 aaKnown RBP13.7□□□□□ -0.22
HDAC4-204ENST00000446876 MAP4K2Q12851 820 aa13.7□□□□□ -0.22
HDAC4-204ENST00000446876 NNATQ16517 81 aa13.7□□□□□ -0.22
HDAC4-204ENST00000446876 ZNF628Q5EBL2 1059 aa13.7□□□□□ -0.22
HDAC4-204ENST00000446876 XKR7Q5GH72 579 aa13.7□□□□□ -0.22
HDAC4-204ENST00000446876 CLEC18BQ6UXF7 455 aa13.7□□□□□ -0.22
HDAC4-204ENST00000446876 RTL4Q6ZR62 310 aa13.7□□□□□ -0.22
HDAC4-204ENST00000446876 GPALPP1Q8IXQ4 340 aa13.7□□□□□ -0.22
HDAC4-204ENST00000446876 ZNF781Q8N8C0 355 aa13.7□□□□□ -0.22
HDAC4-204ENST00000446876 FAM98AQ8NCA5 519 aaKnown RBP13.7□□□□□ -0.22
HDAC4-204ENST00000446876 CLEC18CQ8NCF0 446 aa13.7□□□□□ -0.22
HDAC4-204ENST00000446876 OR52R1Q8NGF1 315 aa13.7□□□□□ -0.22
HDAC4-204ENST00000446876 C16orf52Q8NHV5 167 aa13.7□□□□□ -0.22
HDAC4-204ENST00000446876 SLC22A8Q8TCC7 542 aa13.7□□□□□ -0.22
HDAC4-204ENST00000446876 TSSK3Q96PN8 268 aa13.7□□□□□ -0.22
HDAC4-204ENST00000446876 SORT1Q99523 831 aa13.7□□□□□ -0.22
HDAC4-204ENST00000446876 ITPAQ9BY32 194 aa13.7□□□□□ -0.22
HDAC4-204ENST00000446876 STMN4Q9H169 189 aaPredicted RBP13.7□□□□□ -0.22
HDAC4-204ENST00000446876 MIEF1Q9NQG6 463 aa13.7□□□□□ -0.22
HDAC4-204ENST00000446876 GIMAP4Q9NUV9 329 aa13.7□□□□□ -0.22
HDAC4-204ENST00000446876 EHD3Q9NZN3 535 aa13.7□□□□□ -0.22
HDAC4-204ENST00000446876 BAIAP2L1Q9UHR4 511 aa13.7□□□□□ -0.22
HDAC4-204ENST00000446876 ZNF639Q9UID6 485 aa13.7□□□□□ -0.22
HDAC4-204ENST00000446876 FLNCQ14315 2725 aa13.7□□□□□ -0.22
HDAC4-204ENST00000446876 TMEM114B3SHH9 223 aa13.69□□□□□ -0.22
HDAC4-204ENST00000446876 NPIPA5E9PKD4 350 aa13.69□□□□□ -0.22
HDAC4-204ENST00000446876 ZNHIT1O43257 154 aa13.69□□□□□ -0.22
HDAC4-204ENST00000446876 PEX11AO75192 247 aa13.69□□□□□ -0.22
HDAC4-204ENST00000446876 UNC5CO95185 931 aa13.69□□□□□ -0.22
HDAC4-204ENST00000446876 RNF224P0DH78 156 aa13.69□□□□□ -0.22
HDAC4-204ENST00000446876 GPX3P22352 226 aa13.69□□□□□ -0.22
HDAC4-204ENST00000446876 SLC1A6P48664 564 aa13.69□□□□□ -0.22
HDAC4-204ENST00000446876 PDCD2Q16342 344 aaPredicted RBP13.69□□□□□ -0.22
HDAC4-204ENST00000446876 ZNF791Q3KP31 576 aaPredicted RBP13.69□□□□□ -0.22
HDAC4-204ENST00000446876 FHL5Q5TD97 284 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms