RNA–Protein interactions for RNA: ENST00000445902.2

VPS52-212, Transcript of VPS52, GARP complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS52, Length 2,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-212ENST00000445902 ENAMQ9NRM1 1142 aa13.23□□□□□ -0.29
VPS52-212ENST00000445902 PLXNB3Q9ULL4 1909 aa13.22□□□□□ -0.29
VPS52-212ENST00000445902 TRBV5-4A0A0C4DH59 114 aa13.22□□□□□ -0.29
VPS52-212ENST00000445902 MYADML2A6NDP7 307 aa13.22□□□□□ -0.29
VPS52-212ENST00000445902 NME6O75414 186 aaPredicted RBP13.22□□□□□ -0.29
VPS52-212ENST00000445902 PPM1BO75688 479 aa13.22□□□□□ -0.29
VPS52-212ENST00000445902 RRASP10301 218 aa13.22□□□□□ -0.29
VPS52-212ENST00000445902 GABRA5P31644 462 aa13.22□□□□□ -0.29
VPS52-212ENST00000445902 SPAM1P38567 509 aa13.22□□□□□ -0.29
VPS52-212ENST00000445902 NSG1P42857 185 aa13.22□□□□□ -0.29
VPS52-212ENST00000445902 MRPL58Q14197 206 aaKnown RBP13.22□□□□□ -0.29
VPS52-212ENST00000445902 ZNF791Q3KP31 576 aaPredicted RBP13.22□□□□□ -0.29
VPS52-212ENST00000445902 TCTN3Q6NUS6 607 aa13.22□□□□□ -0.29
VPS52-212ENST00000445902 RTL4Q6ZR62 310 aa13.22□□□□□ -0.29
VPS52-212ENST00000445902 OLIG3Q7RTU3 272 aa13.22□□□□□ -0.29
VPS52-212ENST00000445902 HS6ST3Q8IZP7 471 aa13.22□□□□□ -0.29
VPS52-212ENST00000445902 PIAS4Q8N2W9 510 aaPredicted RBP13.22□□□□□ -0.29
VPS52-212ENST00000445902 OXR1Q8N573 874 aa13.22□□□□□ -0.29
VPS52-212ENST00000445902 GPR32P1Q8NGA4 272 aa13.22□□□□□ -0.29
VPS52-212ENST00000445902 OTULINQ96BN8 352 aa13.22□□□□□ -0.29
VPS52-212ENST00000445902 OTUB1Q96FW1 271 aaPredicted RBP13.22□□□□□ -0.29
VPS52-212ENST00000445902 PPA2Q9H2U2 334 aa13.22□□□□□ -0.29
VPS52-212ENST00000445902 OR51J1Q9H342 316 aa13.22□□□□□ -0.29
VPS52-212ENST00000445902 TESQ9UGI8 421 aaKnown RBP13.22□□□□□ -0.29
VPS52-212ENST00000445902 PDE4DIPQ5VU43 2346 aa13.22□□□□□ -0.29
VPS52-212ENST00000445902 PIPSLA2A3N6 862 aa13.22□□□□□ -0.29
VPS52-212ENST00000445902 SH3BP5O60239 455 aa13.22□□□□□ -0.29
VPS52-212ENST00000445902 DDNO94850 711 aaPredicted RBP13.22□□□□□ -0.29
VPS52-212ENST00000445902 HK1P19367 917 aa13.22□□□□□ -0.29
VPS52-212ENST00000445902 DUSP4Q13115 394 aa13.22□□□□□ -0.29
VPS52-212ENST00000445902 COL28A1Q2UY09 1125 aa13.22□□□□□ -0.29
VPS52-212ENST00000445902 ZNF772Q68DY9 489 aaPredicted RBP13.22□□□□□ -0.29
VPS52-212ENST00000445902 GDF6Q6KF10 455 aaPredicted RBP13.22□□□□□ -0.29
VPS52-212ENST00000445902 KANSL1Q7Z3B3 1105 aa13.22□□□□□ -0.29
VPS52-212ENST00000445902 MRPL10Q7Z7H8 261 aaKnown RBP13.22□□□□□ -0.29
VPS52-212ENST00000445902 ADGRF3Q8IZF5 1079 aa13.22□□□□□ -0.29
VPS52-212ENST00000445902 HSD17B8Q92506 261 aa13.22□□□□□ -0.29
VPS52-212ENST00000445902 C11orf24Q96F05 449 aaPredicted RBP13.22□□□□□ -0.29
VPS52-212ENST00000445902 ART5Q96L15 291 aa13.22□□□□□ -0.29
VPS52-212ENST00000445902 GHITMQ9H3K2 345 aa13.22□□□□□ -0.29
VPS52-212ENST00000445902 IMP3Q9NV31 184 aaKnown RBP13.22□□□□□ -0.29
VPS52-212ENST00000445902 MGAT4BQ9UQ53 548 aa13.22□□□□□ -0.29
VPS52-212ENST00000445902 TP53BP1Q12888 1972 aaPredicted RBP13.21□□□□□ -0.29
VPS52-212ENST00000445902 TEX13CA0A0J9YWL9 993 aa13.21□□□□□ -0.29
VPS52-212ENST00000445902 NPIPB8E9PQR5 432 aa13.21□□□□□ -0.29
VPS52-212ENST00000445902 STK25O00506 426 aa13.21□□□□□ -0.29
VPS52-212ENST00000445902 GABRPO00591 440 aa13.21□□□□□ -0.29
VPS52-212ENST00000445902 H1F0P07305 194 aaKnown RBP13.21□□□□□ -0.29
VPS52-212ENST00000445902 DNASE1P24855 282 aa13.21□□□□□ -0.29
VPS52-212ENST00000445902 TIA1P31483 386 aaKnown RBP eCLIP13.21□□□□□ -0.29
VPS52-212ENST00000445902 BTCP35070 178 aa13.21□□□□□ -0.29
VPS52-212ENST00000445902 THPOP40225 353 aa13.21□□□□□ -0.29
VPS52-212ENST00000445902 HNMTP50135 292 aa13.21□□□□□ -0.29
VPS52-212ENST00000445902 PCBP3P57721 371 aaKnown RBP13.21□□□□□ -0.29
VPS52-212ENST00000445902 COX10Q12887 443 aa13.21□□□□□ -0.29
VPS52-212ENST00000445902 KCNC3Q14003 757 aa13.21□□□□□ -0.29
VPS52-212ENST00000445902 OCLNQ16625 522 aa13.21□□□□□ -0.29
VPS52-212ENST00000445902 CCL14Q16627 93 aa13.21□□□□□ -0.29
VPS52-212ENST00000445902 ZNF630Q2M218 657 aaPredicted RBP13.21□□□□□ -0.29
VPS52-212ENST00000445902 CLLU1Q5K131 121 aa13.21□□□□□ -0.29
VPS52-212ENST00000445902 MTFR2Q6P444 385 aa13.21□□□□□ -0.29
VPS52-212ENST00000445902 NR2C2APQ86WQ0 139 aa13.21□□□□□ -0.29
VPS52-212ENST00000445902 SDR16C5Q8N3Y7 309 aa13.21□□□□□ -0.29
VPS52-212ENST00000445902 MS4A15Q8N5U1 240 aa13.21□□□□□ -0.29
VPS52-212ENST00000445902 ST8SIA4Q92187 359 aa13.21□□□□□ -0.29
VPS52-212ENST00000445902 RFT1Q96AA3 541 aa13.21□□□□□ -0.29
VPS52-212ENST00000445902 NLNQ9BYT8 704 aa13.21□□□□□ -0.29
VPS52-212ENST00000445902 ZSCAN32Q9NX65 697 aa13.21□□□□□ -0.29
VPS52-212ENST00000445902 KCMF1Q9P0J7 381 aa13.21□□□□□ -0.29
VPS52-212ENST00000445902 KCND3Q9UK17 655 aa13.21□□□□□ -0.29
VPS52-212ENST00000445902 A0A1W2PPL8 197 aa13.21□□□□□ -0.29
VPS52-212ENST00000445902 NPIPB15A6NHN6 443 aaPredicted RBP13.21□□□□□ -0.29
VPS52-212ENST00000445902 C5orf58C9J3I9 102 aa13.21□□□□□ -0.29
VPS52-212ENST00000445902 C8GP07360 202 aa13.21□□□□□ -0.29
VPS52-212ENST00000445902 LIMS3P0CW19 117 aa13.21□□□□□ -0.29
VPS52-212ENST00000445902 LIMS4P0CW20 117 aa13.21□□□□□ -0.29
VPS52-212ENST00000445902 ARAFP10398 606 aa13.21□□□□□ -0.29
VPS52-212ENST00000445902 ATP5C1P36542 298 aaKnown RBP13.21□□□□□ -0.29
VPS52-212ENST00000445902 DSTNP60981 165 aa13.21□□□□□ -0.29
VPS52-212ENST00000445902 PUDPQ08623 228 aa13.21□□□□□ -0.29
VPS52-212ENST00000445902 MAP4K2Q12851 820 aa13.21□□□□□ -0.29
VPS52-212ENST00000445902 TPBGQ13641 420 aa13.21□□□□□ -0.29
VPS52-212ENST00000445902 GRB14Q14449 540 aa13.21□□□□□ -0.29
VPS52-212ENST00000445902 ZSWIM7Q19AV6 140 aa13.21□□□□□ -0.29
VPS52-212ENST00000445902 GPAT4Q86UL3 456 aa13.21□□□□□ -0.29
VPS52-212ENST00000445902 GPALPP1Q8IXQ4 340 aa13.21□□□□□ -0.29
VPS52-212ENST00000445902 OR7G3Q8NG95 312 aa13.21□□□□□ -0.29
VPS52-212ENST00000445902 OR4F15Q8NGB8 312 aa13.21□□□□□ -0.29
VPS52-212ENST00000445902 WDR48Q8TAF3 677 aa13.21□□□□□ -0.29
VPS52-212ENST00000445902 PPCDCQ96CD2 204 aa13.21□□□□□ -0.29
VPS52-212ENST00000445902 GPA33Q99795 319 aa13.21□□□□□ -0.29
VPS52-212ENST00000445902 PLA2G12AQ9BZM1 189 aa13.21□□□□□ -0.29
VPS52-212ENST00000445902 AP5M1Q9H0R1 490 aa13.21□□□□□ -0.29
VPS52-212ENST00000445902 TMEM38AQ9H6F2 299 aa13.21□□□□□ -0.29
VPS52-212ENST00000445902 REEP4Q9H6H4 257 aa13.21□□□□□ -0.29
VPS52-212ENST00000445902 EGLN3Q9H6Z9 239 aa13.21□□□□□ -0.29
VPS52-212ENST00000445902 EMC7Q9NPA0 242 aa13.21□□□□□ -0.29
VPS52-212ENST00000445902 A0A1B0GVM2 712 aa13.2□□□□□ -0.3
VPS52-212ENST00000445902 TOR1AO14656 332 aa13.2□□□□□ -0.3
VPS52-212ENST00000445902 TGFB1P01137 390 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms