RNA–Protein interactions for RNA: ENST00000442708.5

USP39-205, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-205ENST00000442708 CNTRLQ7Z7A1 2325 aa14.87□□□□□ -0.03
USP39-205ENST00000442708 BSNQ9UPA5 3926 aa14.87□□□□□ -0.03
USP39-205ENST00000442708 PDPK1O15530 556 aa14.87□□□□□ -0.03
USP39-205ENST00000442708 ZNF354AO60765 605 aaPredicted RBP14.87□□□□□ -0.03
USP39-205ENST00000442708 NME6O75414 186 aaPredicted RBP14.87□□□□□ -0.03
USP39-205ENST00000442708 ZFAND5O76080 213 aa14.87□□□□□ -0.03
USP39-205ENST00000442708 ZIC2O95409 532 aaPredicted RBP14.87□□□□□ -0.03
USP39-205ENST00000442708 TGDSO95455 350 aa14.87□□□□□ -0.03
USP39-205ENST00000442708 WDPCPO95876 746 aa14.87□□□□□ -0.03
USP39-205ENST00000442708 PRPS1L1P21108 318 aa14.87□□□□□ -0.03
USP39-205ENST00000442708 IL12AP29459 219 aa14.87□□□□□ -0.03
USP39-205ENST00000442708 HPCAL1P37235 193 aa14.87□□□□□ -0.03
USP39-205ENST00000442708 FRKP42685 505 aaPredicted RBP14.87□□□□□ -0.03
USP39-205ENST00000442708 NCBP2P52298 156 aaKnown RBP eCLIP14.87□□□□□ -0.033e-6■■□□□ 12.2
USP39-205ENST00000442708 AQP5P55064 265 aa14.87□□□□□ -0.03
USP39-205ENST00000442708 NME5P56597 212 aa14.87□□□□□ -0.03
USP39-205ENST00000442708 NADK2Q4G0N4 442 aa14.87□□□□□ -0.03
USP39-205ENST00000442708 ABHD17BQ5VST6 288 aa14.87□□□□□ -0.03
USP39-205ENST00000442708 CGB2Q6NT52 195 aa14.87□□□□□ -0.03
USP39-205ENST00000442708 SPATA19Q7Z5L4 167 aa14.87□□□□□ -0.03
USP39-205ENST00000442708 SAMD14Q8IZD0 417 aaPredicted RBP14.87□□□□□ -0.03
USP39-205ENST00000442708 FAM9CQ8IZT9 166 aa14.87□□□□□ -0.03
USP39-205ENST00000442708 SLC5A8Q8N695 610 aa14.87□□□□□ -0.03
USP39-205ENST00000442708 OR7G2Q8NG99 324 aa14.87□□□□□ -0.03
USP39-205ENST00000442708 ZNF675Q8TD23 568 aa14.87□□□□□ -0.03
USP39-205ENST00000442708 COQ8BQ96D53 544 aa14.87□□□□□ -0.03
USP39-205ENST00000442708 ART5Q96L15 291 aa14.87□□□□□ -0.03
USP39-205ENST00000442708 ZNF354BQ96LW1 612 aa14.87□□□□□ -0.03
USP39-205ENST00000442708 GIMAP4Q9NUV9 329 aa14.87□□□□□ -0.03
USP39-205ENST00000442708 FGFR1OP2Q9NVK5 253 aa14.87□□□□□ -0.03
USP39-205ENST00000442708 COPS7AQ9UBW8 275 aa14.87□□□□□ -0.03
USP39-205ENST00000442708 DTX4Q9Y2E6 619 aa14.87□□□□□ -0.03
USP39-205ENST00000442708 C9JVG2 144 aa14.86□□□□□ -0.03
USP39-205ENST00000442708 WWP2O00308 870 aa14.86□□□□□ -0.03
USP39-205ENST00000442708 DYRK3O43781 588 aa14.86□□□□□ -0.03
USP39-205ENST00000442708 NTSP30990 170 aa14.86□□□□□ -0.03
USP39-205ENST00000442708 MPIP34949 423 aa14.86□□□□□ -0.03
USP39-205ENST00000442708 GYS2P54840 703 aa14.86□□□□□ -0.03
USP39-205ENST00000442708 UFM1P61960 85 aa14.86□□□□□ -0.03
USP39-205ENST00000442708 NFATC3Q12968 1075 aa14.86□□□□□ -0.03
USP39-205ENST00000442708 EBPQ15125 230 aaKnown RBP14.86□□□□□ -0.03
USP39-205ENST00000442708 MEP1AQ16819 746 aa14.86□□□□□ -0.03
USP39-205ENST00000442708 RNF111Q6ZNA4 994 aa14.86□□□□□ -0.03
USP39-205ENST00000442708 R3HCC1LQ7Z5L2 792 aaKnown RBP14.86□□□□□ -0.03
USP39-205ENST00000442708 LGI4Q8N135 537 aa14.86□□□□□ -0.03
USP39-205ENST00000442708 OR8K3Q8NH51 312 aa14.86□□□□□ -0.03
USP39-205ENST00000442708 CEP70Q8NHQ1 597 aa14.86□□□□□ -0.03
USP39-205ENST00000442708 OR10A5Q9H207 317 aa14.86□□□□□ -0.03
USP39-205ENST00000442708 EPS8L2Q9H6S3 715 aa14.86□□□□□ -0.03
USP39-205ENST00000442708 NPHS2Q9NP85 383 aa14.86□□□□□ -0.03
USP39-205ENST00000442708 ANKRD10Q9NXR5 420 aa14.86□□□□□ -0.03
USP39-205ENST00000442708 MYOTQ9UBF9 498 aa14.86□□□□□ -0.03
USP39-205ENST00000442708 NUP214P35658 2090 aaPredicted RBP14.85□□□□□ -0.03
USP39-205ENST00000442708 KLHL41O60662 606 aa14.85□□□□□ -0.03
USP39-205ENST00000442708 OR2J2O76002 312 aa14.85□□□□□ -0.03
USP39-205ENST00000442708 CD96P40200 585 aa14.85□□□□□ -0.03
USP39-205ENST00000442708 MC3RP41968 323 aa14.85□□□□□ -0.03
USP39-205ENST00000442708 EMDP50402 254 aa14.85□□□□□ -0.03
USP39-205ENST00000442708 CDK9P50750 372 aaKnown RBP14.85□□□□□ -0.03
USP39-205ENST00000442708 WNT3P56703 355 aa14.85□□□□□ -0.03
USP39-205ENST00000442708 PHC1P78364 1004 aa14.85□□□□□ -0.03
USP39-205ENST00000442708 HSPB3Q12988 150 aa14.85□□□□□ -0.03
USP39-205ENST00000442708 TUBA3CQ13748 450 aa14.85□□□□□ -0.03
USP39-205ENST00000442708 PGS1Q32NB8 556 aa14.85□□□□□ -0.03
USP39-205ENST00000442708 CPTPQ5TA50 214 aa14.85□□□□□ -0.03
USP39-205ENST00000442708 TUBA3EQ6PEY2 450 aa14.85□□□□□ -0.03
USP39-205ENST00000442708 TMEM107Q6UX40 140 aa14.85□□□□□ -0.03
USP39-205ENST00000442708 CAMKMTQ7Z624 323 aa14.85□□□□□ -0.03
USP39-205ENST00000442708 ZNF227Q86WZ6 799 aa14.85□□□□□ -0.03
USP39-205ENST00000442708 ZADH2Q8N4Q0 377 aa14.85□□□□□ -0.03
USP39-205ENST00000442708 ZNF441Q8N8Z8 693 aa14.85□□□□□ -0.03
USP39-205ENST00000442708 OR7G1Q8NGA0 311 aa14.85□□□□□ -0.03
USP39-205ENST00000442708 OR52R1Q8NGF1 315 aa14.85□□□□□ -0.03
USP39-205ENST00000442708 C16orf52Q8NHV5 167 aa14.85□□□□□ -0.03
USP39-205ENST00000442708 HAS2Q92819 552 aa14.85□□□□□ -0.03
USP39-205ENST00000442708 ZNF317Q96PQ6 595 aaPredicted RBP14.85□□□□□ -0.03
USP39-205ENST00000442708 DPY30Q9C005 99 aa14.85□□□□□ -0.03
USP39-205ENST00000442708 WWTR1Q9GZV5 400 aa14.85□□□□□ -0.03
USP39-205ENST00000442708 TCF7L2Q9NQB0 619 aa14.85□□□□□ -0.03
USP39-205ENST00000442708 LUZP4Q9P127 313 aa14.85□□□□□ -0.03
USP39-205ENST00000442708 BCAP29Q9UHQ4 241 aa14.85□□□□□ -0.03
USP39-205ENST00000442708 TEKT2Q9UIF3 430 aa14.85□□□□□ -0.03
USP39-205ENST00000442708 DCTN4Q9UJW0 460 aa14.85□□□□□ -0.03
USP39-205ENST00000442708 EXPH5Q8NEV8 1989 aa14.84□□□□□ -0.03
USP39-205ENST00000442708 COL6A6A6NMZ7 2263 aa14.84□□□□□ -0.03
USP39-205ENST00000442708 OR6C76A6NM76 312 aa14.84□□□□□ -0.03
USP39-205ENST00000442708 E9PBE3 544 aa14.84□□□□□ -0.03
USP39-205ENST00000442708 UBDO15205 165 aa14.84□□□□□ -0.03
USP39-205ENST00000442708 PLOD3O60568 738 aa14.84□□□□□ -0.03
USP39-205ENST00000442708 DPM1O60762 260 aa14.84□□□□□ -0.03
USP39-205ENST00000442708 ITGA10O75578 1167 aa14.84□□□□□ -0.03
USP39-205ENST00000442708 NADKO95544 446 aaPredicted RBP14.84□□□□□ -0.03
USP39-205ENST00000442708 VIMP08670 466 aaKnown RBP14.84□□□□□ -0.03
USP39-205ENST00000442708 GPX3P22352 226 aa14.84□□□□□ -0.03
USP39-205ENST00000442708 RPL3P39023 403 aaKnown RBP14.84□□□□□ -0.03
USP39-205ENST00000442708 ZFP36L2P47974 494 aaKnown RBP14.84□□□□□ -0.03
USP39-205ENST00000442708 SF3A3Q12874 501 aaKnown RBP eCLIP14.84□□□□□ -0.03
USP39-205ENST00000442708 PLEKHN1Q494U1 663 aaPredicted RBP14.84□□□□□ -0.03
USP39-205ENST00000442708 C6orf163Q5TEZ5 329 aa14.84□□□□□ -0.03
USP39-205ENST00000442708 SLC6A19Q695T7 634 aa14.84□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms