RNA–Protein interactions for RNA: ENST00000440048.1

VARS-217, Transcript of valyl-tRNA synthetase, humanhuman

TSL 1 (best)

Gene VARS, Length 804 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-217ENST00000440048 NOXRED1Q6NXP6 359 aa21.84■■□□□ 1.09
VARS-217ENST00000440048 Q6ZSR9 355 aa21.84■■□□□ 1.09
VARS-217ENST00000440048 VWA5B2Q8N398 1253 aa21.84■■□□□ 1.09
VARS-217ENST00000440048 ZNF441Q8N8Z8 693 aa21.84■■□□□ 1.09
VARS-217ENST00000440048 GOLM1Q8NBJ4 401 aa21.84■■□□□ 1.09
VARS-217ENST00000440048 ADCY4Q8NFM4 1077 aa21.84■■□□□ 1.09
VARS-217ENST00000440048 OR6Y1Q8NGX8 325 aa21.84■■□□□ 1.09
VARS-217ENST00000440048 OR2T11Q8NH01 316 aa21.84■■□□□ 1.09
VARS-217ENST00000440048 CDC26Q8NHZ8 85 aa21.84■■□□□ 1.09
VARS-217ENST00000440048 PUM2Q8TB72 1066 aaKnown RBP eCLIP21.84■■□□□ 1.09
VARS-217ENST00000440048 EXOSC8Q96B26 276 aaKnown RBP21.84■■□□□ 1.09
VARS-217ENST00000440048 METTL2AQ96IZ6 378 aaKnown RBP21.84■■□□□ 1.09
VARS-217ENST00000440048 SGCZQ96LD1 299 aa21.84■■□□□ 1.09
VARS-217ENST00000440048 GPR137Q96N19 417 aa21.84■■□□□ 1.09
VARS-217ENST00000440048 PFDN4Q9NQP4 134 aa21.84■■□□□ 1.09
VARS-217ENST00000440048 NPIPA1Q9UND3 350 aa21.84■■□□□ 1.09
VARS-217ENST00000440048 SLC5A6Q9Y289 635 aa21.84■■□□□ 1.09
VARS-217ENST00000440048 TRAF6Q9Y4K3 522 aa21.84■■□□□ 1.09
VARS-217ENST00000440048 C2orf92A0A1B0GVN3 265 aa21.83■■□□□ 1.09
VARS-217ENST00000440048 ERLIN1O75477 346 aa21.83■■□□□ 1.09
VARS-217ENST00000440048 LINC00032P0C843 101 aa21.83■■□□□ 1.09
VARS-217ENST00000440048 RNF224P0DH78 156 aa21.83■■□□□ 1.09
VARS-217ENST00000440048 ZNF24P17028 368 aa21.83■■□□□ 1.09
VARS-217ENST00000440048 SERPINB5P36952 375 aa21.83■■□□□ 1.09
VARS-217ENST00000440048 RFC3P40938 356 aa21.83■■□□□ 1.09
VARS-217ENST00000440048 SERPINB4P48594 390 aa21.83■■□□□ 1.09
VARS-217ENST00000440048 LTB4RQ15722 352 aa21.83■■□□□ 1.09
VARS-217ENST00000440048 UGT3A2Q3SY77 523 aa21.83■■□□□ 1.09
VARS-217ENST00000440048 KRTCAP3Q53RY4 240 aa21.83■■□□□ 1.09
VARS-217ENST00000440048 FAM71E1Q6IPT2 247 aa21.83■■□□□ 1.09
VARS-217ENST00000440048 NUDCD3Q8IVD9 361 aa21.83■■□□□ 1.09
VARS-217ENST00000440048 CCDC116Q8IYX3 515 aa21.83■■□□□ 1.09
VARS-217ENST00000440048 CLYBLQ8N0X4 340 aa21.83■■□□□ 1.09
VARS-217ENST00000440048 ZFP62Q8NB50 900 aaPredicted RBP21.83■■□□□ 1.09
VARS-217ENST00000440048 CTHRC1Q96CG8 243 aa21.83■■□□□ 1.09
VARS-217ENST00000440048 PGM2Q96G03 612 aa21.83■■□□□ 1.09
VARS-217ENST00000440048 PKNOX2Q96KN3 472 aa21.83■■□□□ 1.09
VARS-217ENST00000440048 LRTM1Q9HBL6 345 aa21.83■■□□□ 1.09
VARS-217ENST00000440048 MYNNQ9NPC7 610 aa21.83■■□□□ 1.09
VARS-217ENST00000440048 SLC35C2Q9NQQ7 365 aa21.83■■□□□ 1.09
VARS-217ENST00000440048 C1orf109Q9NX04 203 aa21.83■■□□□ 1.09
VARS-217ENST00000440048 EHD3Q9NZN3 535 aa21.83■■□□□ 1.09
VARS-217ENST00000440048 ZNF639Q9UID6 485 aa21.83■■□□□ 1.09
VARS-217ENST00000440048 GTF3C1Q12789 2109 aa21.83■■□□□ 1.08
VARS-217ENST00000440048 A0A0G2JMM0 328 aa21.82■■□□□ 1.08
VARS-217ENST00000440048 A0A1W2PPB8 328 aa21.82■■□□□ 1.08
VARS-217ENST00000440048 A0A1W2PRS3 328 aa21.82■■□□□ 1.08
VARS-217ENST00000440048 KIR3DP1A8MWS1 328 aa21.82■■□□□ 1.08
VARS-217ENST00000440048 STSP08842 583 aa21.82■■□□□ 1.08
VARS-217ENST00000440048 NEFHP12036 1026 aa21.82■■□□□ 1.08
VARS-217ENST00000440048 DDCP20711 480 aa21.82■■□□□ 1.08
VARS-217ENST00000440048 NR0B1P51843 470 aaKnown RBP21.82■■□□□ 1.08
VARS-217ENST00000440048 EXOSC7Q15024 291 aaKnown RBP21.82■■□□□ 1.08
VARS-217ENST00000440048 SH2D4BQ5SQS7 431 aa21.82■■□□□ 1.08
VARS-217ENST00000440048 HLA-DQA1Q5Y7H0 255 aa21.82■■□□□ 1.08
VARS-217ENST00000440048 HOMEZQ8IX15 550 aa21.82■■□□□ 1.08
VARS-217ENST00000440048 SAMD14Q8IZD0 417 aaPredicted RBP21.82■■□□□ 1.08
VARS-217ENST00000440048 C16orf52Q8NHV5 167 aa21.82■■□□□ 1.08
VARS-217ENST00000440048 AGR3Q8TD06 166 aa21.82■■□□□ 1.08
VARS-217ENST00000440048 TWIST2Q8WVJ9 160 aa21.82■■□□□ 1.08
VARS-217ENST00000440048 ADIPOR1Q96A54 375 aa21.82■■□□□ 1.08
VARS-217ENST00000440048 TP53INP1Q96A56 240 aa21.82■■□□□ 1.08
VARS-217ENST00000440048 SPACA9Q96E40 222 aaPredicted RBP21.82■■□□□ 1.08
VARS-217ENST00000440048 WBP11Q9Y2W2 641 aaKnown RBP21.82■■□□□ 1.08
VARS-217ENST00000440048 ACTL7BQ9Y614 415 aa21.82■■□□□ 1.08
VARS-217ENST00000440048 PINLYPA6NC86 204 aa21.81■■□□□ 1.08
VARS-217ENST00000440048 G3V3Y1 287 aa21.81■■□□□ 1.08
VARS-217ENST00000440048 TM9SF1O15321 606 aa21.81■■□□□ 1.08
VARS-217ENST00000440048 ASNA1O43681 348 aa21.81■■□□□ 1.08
VARS-217ENST00000440048 CBX7O95931 251 aa21.81■■□□□ 1.08
VARS-217ENST00000440048 FBXO45P0C2W1 286 aa21.81■■□□□ 1.08
VARS-217ENST00000440048 CCL3P10147 92 aa21.81■■□□□ 1.08
VARS-217ENST00000440048 PCSK2P16519 638 aa21.81■■□□□ 1.08
VARS-217ENST00000440048 CNR1P21554 472 aa21.81■■□□□ 1.08
VARS-217ENST00000440048 DUSP8Q13202 625 aa21.81■■□□□ 1.08
VARS-217ENST00000440048 PRSS53Q2L4Q9 553 aa21.81■■□□□ 1.08
VARS-217ENST00000440048 C4orf17Q53FE4 359 aa21.81■■□□□ 1.08
VARS-217ENST00000440048 TRMT12Q53H54 448 aaKnown RBP21.81■■□□□ 1.08
VARS-217ENST00000440048 BEND6Q5SZJ8 279 aaPredicted RBP21.81■■□□□ 1.08
VARS-217ENST00000440048 MYO7BQ6PIF6 2116 aa21.81■■□□□ 1.08
VARS-217ENST00000440048 DDIASQ8IXT1 998 aa21.81■■□□□ 1.08
VARS-217ENST00000440048 TAGAPQ8N103 731 aa21.81■■□□□ 1.08
VARS-217ENST00000440048 SIMC1Q8NDZ2 872 aa21.81■■□□□ 1.08
VARS-217ENST00000440048 OR2M7Q8NG81 312 aa21.81■■□□□ 1.08
VARS-217ENST00000440048 ZNF675Q8TD23 568 aa21.81■■□□□ 1.08
VARS-217ENST00000440048 SH2D2AQ9NP31 389 aa21.81■■□□□ 1.08
VARS-217ENST00000440048 SACM1LQ9NTJ5 587 aa21.81■■□□□ 1.08
VARS-217ENST00000440048 RYDENQ9NUL5 291 aaKnown RBP21.81■■□□□ 1.08
VARS-217ENST00000440048 GIMAP4Q9NUV9 329 aa21.81■■□□□ 1.08
VARS-217ENST00000440048 BCAP29Q9UHQ4 241 aa21.81■■□□□ 1.08
VARS-217ENST00000440048 EXO1Q9UQ84 846 aaKnown RBP21.81■■□□□ 1.08
VARS-217ENST00000440048 ENTPD4Q9Y227 616 aa21.81■■□□□ 1.08
VARS-217ENST00000440048 DTX4Q9Y2E6 619 aa21.81■■□□□ 1.08
VARS-217ENST00000440048 WDR91A4D1P6 747 aa21.8■■□□□ 1.08
VARS-217ENST00000440048 PIP5K1BO14986 540 aa21.8■■□□□ 1.08
VARS-217ENST00000440048 LRRTM2O43300 516 aa21.8■■□□□ 1.08
VARS-217ENST00000440048 LDLRP01130 860 aa21.8■■□□□ 1.08
VARS-217ENST00000440048 MYZAPP0CAP1 466 aa21.8■■□□□ 1.08
VARS-217ENST00000440048 GPX3P22352 226 aa21.8■■□□□ 1.08
VARS-217ENST00000440048 TACR1P25103 407 aa21.8■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms