RNA–Protein interactions for RNA: ENST00000439475.1

MCF2L-216, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5

Gene MCF2L, Length 453 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-216ENST00000439475 ABOP16442 354 aa9.67□□□□□ -0.86
MCF2L-216ENST00000439475 DDCP20711 480 aa9.67□□□□□ -0.86
MCF2L-216ENST00000439475 PRPH2P23942 346 aa9.67□□□□□ -0.86
MCF2L-216ENST00000439475 GPR85P60893 370 aa9.67□□□□□ -0.86
MCF2L-216ENST00000439475 ARL13AQ5H913 290 aaPredicted RBP9.67□□□□□ -0.86
MCF2L-216ENST00000439475 CLEC6AQ6EIG7 209 aa9.67□□□□□ -0.86
MCF2L-216ENST00000439475 NOXRED1Q6NXP6 359 aa9.67□□□□□ -0.86
MCF2L-216ENST00000439475 FAM111BQ6SJ93 734 aa9.67□□□□□ -0.86
MCF2L-216ENST00000439475 LRIG3Q6UXM1 1119 aa9.67□□□□□ -0.86
MCF2L-216ENST00000439475 IKBIPQ70UQ0 350 aa9.67□□□□□ -0.86
MCF2L-216ENST00000439475 EXOC3L1Q86VI1 746 aa9.67□□□□□ -0.86
MCF2L-216ENST00000439475 SLC22A16Q86VW1 577 aa9.67□□□□□ -0.86
MCF2L-216ENST00000439475 SPPL2CQ8IUH8 684 aa9.67□□□□□ -0.86
MCF2L-216ENST00000439475 DDIASQ8IXT1 998 aa9.67□□□□□ -0.86
MCF2L-216ENST00000439475 KIRREL3Q8IZU9 778 aa9.67□□□□□ -0.86
MCF2L-216ENST00000439475 ZNF615Q8N8J6 731 aa9.67□□□□□ -0.86
MCF2L-216ENST00000439475 ZFP62Q8NB50 900 aaPredicted RBP9.67□□□□□ -0.86
MCF2L-216ENST00000439475 FAM13CQ8NE31 585 aa9.67□□□□□ -0.86
MCF2L-216ENST00000439475 C17orf47Q8NEP4 570 aa9.67□□□□□ -0.86
MCF2L-216ENST00000439475 OR2M7Q8NG81 312 aa9.67□□□□□ -0.86
MCF2L-216ENST00000439475 RELTQ969Z4 430 aa9.67□□□□□ -0.86
MCF2L-216ENST00000439475 ERP27Q96DN0 273 aa9.67□□□□□ -0.86
MCF2L-216ENST00000439475 SPACA9Q96E40 222 aaPredicted RBP9.67□□□□□ -0.86
MCF2L-216ENST00000439475 HSPBAP1Q96EW2 488 aa9.67□□□□□ -0.86
MCF2L-216ENST00000439475 C11orf24Q96F05 449 aaPredicted RBP9.67□□□□□ -0.86
MCF2L-216ENST00000439475 CNRIP1Q96F85 164 aaPredicted RBP9.67□□□□□ -0.86
MCF2L-216ENST00000439475 ZNF681Q96N22 645 aa9.67□□□□□ -0.86
MCF2L-216ENST00000439475 ZIM3Q96PE6 472 aa9.67□□□□□ -0.86
MCF2L-216ENST00000439475 MECRQ9BV79 373 aa9.67□□□□□ -0.86
MCF2L-216ENST00000439475 LRTM1Q9HBL6 345 aa9.67□□□□□ -0.86
MCF2L-216ENST00000439475 KCNK9Q9NPC2 374 aa9.67□□□□□ -0.86
MCF2L-216ENST00000439475 MAT2BQ9NZL9 334 aa9.67□□□□□ -0.86
MCF2L-216ENST00000439475 HEY2Q9UBP5 337 aa9.67□□□□□ -0.86
MCF2L-216ENST00000439475 TMED5Q9Y3A6 229 aa9.67□□□□□ -0.86
MCF2L-216ENST00000439475 POLR3HQ9Y535 204 aaPredicted RBP9.67□□□□□ -0.86
MCF2L-216ENST00000439475 NPFFR2Q9Y5X5 522 aa9.67□□□□□ -0.86
MCF2L-216ENST00000439475 ACTL7BQ9Y614 415 aa9.67□□□□□ -0.86
MCF2L-216ENST00000439475 RP1L1Q8IWN7 2480 aaPredicted RBP9.67□□□□□ -0.86
MCF2L-216ENST00000439475 GTF3C1Q12789 2109 aa9.67□□□□□ -0.86
MCF2L-216ENST00000439475 TMEM114B3SHH9 223 aa9.66□□□□□ -0.86
MCF2L-216ENST00000439475 CCL21O00585 134 aa9.66□□□□□ -0.86
MCF2L-216ENST00000439475 HS6ST1O60243 411 aa9.66□□□□□ -0.86
MCF2L-216ENST00000439475 CDC40O60508 579 aaKnown RBP eCLIP9.66□□□□□ -0.86
MCF2L-216ENST00000439475 SLC19A2O60779 497 aa9.66□□□□□ -0.86
MCF2L-216ENST00000439475 SLITRK5O94991 958 aa9.66□□□□□ -0.86
MCF2L-216ENST00000439475 ZWINTO95229 277 aa9.66□□□□□ -0.86
MCF2L-216ENST00000439475 LDLRP01130 860 aa9.66□□□□□ -0.86
MCF2L-216ENST00000439475 FBXO45P0C2W1 286 aa9.66□□□□□ -0.86
MCF2L-216ENST00000439475 CREB1P16220 341 aa9.66□□□□□ -0.86
MCF2L-216ENST00000439475 NAGAP17050 411 aa9.66□□□□□ -0.86
MCF2L-216ENST00000439475 MAPK1P28482 360 aa9.66□□□□□ -0.86
MCF2L-216ENST00000439475 NTSP30990 170 aa9.66□□□□□ -0.86
MCF2L-216ENST00000439475 CA7P43166 264 aa9.66□□□□□ -0.86
MCF2L-216ENST00000439475 PPIAP62937 165 aaKnown RBP9.66□□□□□ -0.86
MCF2L-216ENST00000439475 NTRK2Q16620 822 aa9.66□□□□□ -0.86
MCF2L-216ENST00000439475 ZNF791Q3KP31 576 aaPredicted RBP9.66□□□□□ -0.86
MCF2L-216ENST00000439475 SH2D4BQ5SQS7 431 aa9.66□□□□□ -0.86
MCF2L-216ENST00000439475 C1QL3Q5VWW1 255 aa9.66□□□□□ -0.86
MCF2L-216ENST00000439475 KANK2Q63ZY3 851 aa9.66□□□□□ -0.86
MCF2L-216ENST00000439475 TMEM198Q66K66 360 aa9.66□□□□□ -0.86
MCF2L-216ENST00000439475 FAM71E1Q6IPT2 247 aa9.66□□□□□ -0.86
MCF2L-216ENST00000439475 Q6ZSR9 355 aa9.66□□□□□ -0.86
MCF2L-216ENST00000439475 FJX1Q86VR8 437 aa9.66□□□□□ -0.86
MCF2L-216ENST00000439475 TICAM1Q8IUC6 712 aa9.66□□□□□ -0.86
MCF2L-216ENST00000439475 FAM9CQ8IZT9 166 aa9.66□□□□□ -0.86
MCF2L-216ENST00000439475 ADCY4Q8NFM4 1077 aa9.66□□□□□ -0.86
MCF2L-216ENST00000439475 ZNF675Q8TD23 568 aa9.66□□□□□ -0.86
MCF2L-216ENST00000439475 PAQR8Q8TEZ7 354 aa9.66□□□□□ -0.86
MCF2L-216ENST00000439475 TWIST2Q8WVJ9 160 aa9.66□□□□□ -0.86
MCF2L-216ENST00000439475 CTHRC1Q96CG8 243 aa9.66□□□□□ -0.86
MCF2L-216ENST00000439475 PGM2Q96G03 612 aa9.66□□□□□ -0.86
MCF2L-216ENST00000439475 LCORQ96JN0 433 aaPredicted RBP9.66□□□□□ -0.86
MCF2L-216ENST00000439475 PPP3R2Q96LZ3 170 aa9.66□□□□□ -0.86
MCF2L-216ENST00000439475 PSMG3-AS1Q96PY0 264 aa9.66□□□□□ -0.86
MCF2L-216ENST00000439475 SECISBP2Q96T21 854 aaKnown RBP9.66□□□□□ -0.86
MCF2L-216ENST00000439475 TSPAN10Q9H1Z9 355 aaPredicted RBP9.66□□□□□ -0.86
MCF2L-216ENST00000439475 IL1RL2Q9HB29 575 aa9.66□□□□□ -0.86
MCF2L-216ENST00000439475 MYNNQ9NPC7 610 aa9.66□□□□□ -0.86
MCF2L-216ENST00000439475 TAS2R7Q9NYW3 318 aa9.66□□□□□ -0.86
MCF2L-216ENST00000439475 ZNF639Q9UID6 485 aa9.66□□□□□ -0.86
MCF2L-216ENST00000439475 BOKQ9UMX3 212 aaPredicted RBP9.66□□□□□ -0.86
MCF2L-216ENST00000439475 SEC23IPQ9Y6Y8 1000 aaKnown RBP9.66□□□□□ -0.86
MCF2L-216ENST00000439475 EML6Q6ZMW3 1958 aa9.66□□□□□ -0.86
MCF2L-216ENST00000439475 A0A1W2PS29 197 aa9.65□□□□□ -0.86
MCF2L-216ENST00000439475 WDR91A4D1P6 747 aa9.65□□□□□ -0.86
MCF2L-216ENST00000439475 WIPF3A6NGB9 483 aa9.65□□□□□ -0.86
MCF2L-216ENST00000439475 ACOX3O15254 700 aa9.65□□□□□ -0.86
MCF2L-216ENST00000439475 BIRC5O15392 142 aa9.65□□□□□ -0.86
MCF2L-216ENST00000439475 ZNF354AO60765 605 aaPredicted RBP9.65□□□□□ -0.86
MCF2L-216ENST00000439475 COQ9O75208 318 aa9.65□□□□□ -0.86
MCF2L-216ENST00000439475 NADKO95544 446 aaPredicted RBP9.65□□□□□ -0.86
MCF2L-216ENST00000439475 HSPA4LO95757 839 aa9.65□□□□□ -0.86
MCF2L-216ENST00000439475 CLPSP04118 112 aa9.65□□□□□ -0.86
MCF2L-216ENST00000439475 CHRNGP07510 517 aa9.65□□□□□ -0.86
MCF2L-216ENST00000439475 LINC00032P0C843 101 aa9.65□□□□□ -0.86
MCF2L-216ENST00000439475 GP1BBP13224 206 aa9.65□□□□□ -0.86
MCF2L-216ENST00000439475 S1PR1P21453 382 aa9.65□□□□□ -0.86
MCF2L-216ENST00000439475 DRD5P21918 477 aa9.65□□□□□ -0.86
MCF2L-216ENST00000439475 PTGS2P35354 604 aa9.65□□□□□ -0.86
MCF2L-216ENST00000439475 KRT20P35900 424 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms