RNA–Protein interactions for RNA: ENST00000438801.1

HMGB1P18-201, Transcript of high mobility group box 1 pseudogene 18, humanhuman

BASIC

Gene HMGB1P18, Length 619 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P18-201ENST00000438801 EXD1Q8NHP7 514 aa2.15□□□□□ -2.07
HMGB1P18-201ENST00000438801 ACER1Q8TDN7 264 aa2.15□□□□□ -2.07
HMGB1P18-201ENST00000438801 MPP4Q96JB8 637 aa2.15□□□□□ -2.07
HMGB1P18-201ENST00000438801 C4orf45Q96LM5 186 aa2.15□□□□□ -2.07
HMGB1P18-201ENST00000438801 FAM218AQ96MZ4 157 aa2.15□□□□□ -2.07
HMGB1P18-201ENST00000438801 LINC00167Q96N53 147 aa2.15□□□□□ -2.07
HMGB1P18-201ENST00000438801 FEM1AQ9BSK4 669 aa2.15□□□□□ -2.07
HMGB1P18-201ENST00000438801 TRIM9Q9C026 710 aa2.15□□□□□ -2.07
HMGB1P18-201ENST00000438801 MTMR12Q9C0I1 747 aa2.15□□□□□ -2.07
HMGB1P18-201ENST00000438801 WNT5BQ9H1J7 359 aa2.15□□□□□ -2.07
HMGB1P18-201ENST00000438801 SMARCAD1Q9H4L7 1026 aa2.15□□□□□ -2.07
HMGB1P18-201ENST00000438801 MTHFD2LQ9H903 347 aaPredicted RBP2.15□□□□□ -2.07
HMGB1P18-201ENST00000438801 PDE7BQ9NP56 450 aa2.15□□□□□ -2.07
HMGB1P18-201ENST00000438801 TNFRSF19Q9NS68 423 aa2.15□□□□□ -2.07
HMGB1P18-201ENST00000438801 KRT84Q9NSB2 600 aa2.15□□□□□ -2.07
HMGB1P18-201ENST00000438801 OLA1Q9NTK5 396 aaKnown RBP2.15□□□□□ -2.07
HMGB1P18-201ENST00000438801 WSB2Q9NYS7 404 aaPredicted RBP2.15□□□□□ -2.07
HMGB1P18-201ENST00000438801 POMT2Q9UKY4 750 aa2.15□□□□□ -2.07
HMGB1P18-201ENST00000438801 VSIG4Q9Y279 399 aa2.15□□□□□ -2.07
HMGB1P18-201ENST00000438801 KIF25-AS1Q9Y6Z4 181 aa2.15□□□□□ -2.07
HMGB1P18-201ENST00000438801 MYH3P11055 1940 aa2.15□□□□□ -2.07
HMGB1P18-201ENST00000438801 FREM1Q5H8C1 2179 aa2.15□□□□□ -2.07
HMGB1P18-201ENST00000438801 NUMA1Q14980 2115 aa2.14□□□□□ -2.07
HMGB1P18-201ENST00000438801 HRNRQ86YZ3 2850 aaPredicted RBP2.14□□□□□ -2.07
HMGB1P18-201ENST00000438801 IGLV4-3A0A075B6K6 122 aa2.14□□□□□ -2.07
HMGB1P18-201ENST00000438801 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP2.14□□□□□ -2.07
HMGB1P18-201ENST00000438801 FEZF1A0PJY2 475 aa2.14□□□□□ -2.07
HMGB1P18-201ENST00000438801 A8MV72 311 aaPredicted RBP2.14□□□□□ -2.07
HMGB1P18-201ENST00000438801 NPIPB9F8W1W9 429 aa2.14□□□□□ -2.07
HMGB1P18-201ENST00000438801 G3V2L1 256 aa2.14□□□□□ -2.07
HMGB1P18-201ENST00000438801 CHADO15335 359 aa2.14□□□□□ -2.07
HMGB1P18-201ENST00000438801 KRT33AO76009 404 aa2.14□□□□□ -2.07
HMGB1P18-201ENST00000438801 SLCO2B1O94956 709 aa2.14□□□□□ -2.07
HMGB1P18-201ENST00000438801 CHRNA1P02708 482 aa2.14□□□□□ -2.07
HMGB1P18-201ENST00000438801 ZNF286BP0CG31 522 aa2.14□□□□□ -2.07
HMGB1P18-201ENST00000438801 PTMSP20962 102 aa2.14□□□□□ -2.07
HMGB1P18-201ENST00000438801 ZBTB25P24278 435 aa2.14□□□□□ -2.07
HMGB1P18-201ENST00000438801 ACP1P24666 158 aa2.14□□□□□ -2.07
HMGB1P18-201ENST00000438801 CASP2P42575 452 aa2.14□□□□□ -2.07
HMGB1P18-201ENST00000438801 DNA2P51530 1060 aa2.14□□□□□ -2.07
HMGB1P18-201ENST00000438801 VAMP7P51809 220 aa2.14□□□□□ -2.07
HMGB1P18-201ENST00000438801 MYL7Q01449 175 aa2.14□□□□□ -2.07
HMGB1P18-201ENST00000438801 CDC20Q12834 499 aa2.14□□□□□ -2.07
HMGB1P18-201ENST00000438801 ZNF177Q13360 481 aaPredicted RBP2.14□□□□□ -2.07
HMGB1P18-201ENST00000438801 CAPRIN1Q14444 709 aaKnown RBP2.14□□□□□ -2.07
HMGB1P18-201ENST00000438801 TMEM132DQ14C87 1099 aa2.14□□□□□ -2.07
HMGB1P18-201ENST00000438801 CCDC57Q2TAC2 916 aa2.14□□□□□ -2.07
HMGB1P18-201ENST00000438801 PPM1LQ5SGD2 360 aa2.14□□□□□ -2.07
HMGB1P18-201ENST00000438801 RNASEH2BQ5TBB1 312 aaKnown RBP2.14□□□□□ -2.07
HMGB1P18-201ENST00000438801 XKRXQ6PP77 449 aa2.14□□□□□ -2.07
HMGB1P18-201ENST00000438801 BAIAP2L2Q6UXY1 529 aa2.14□□□□□ -2.07
HMGB1P18-201ENST00000438801 ADAMTSL5Q6ZMM2 481 aa2.14□□□□□ -2.07
HMGB1P18-201ENST00000438801 MFSD6LQ8IWD5 586 aa2.14□□□□□ -2.07
HMGB1P18-201ENST00000438801 ST6GALNAC3Q8NDV1 305 aa2.14□□□□□ -2.07
HMGB1P18-201ENST00000438801 OR7A2PQ8NGA2 310 aa2.14□□□□□ -2.07
HMGB1P18-201ENST00000438801 GOT1L1Q8NHS2 421 aaPredicted RBP2.14□□□□□ -2.07
HMGB1P18-201ENST00000438801 FBXO30Q8TB52 745 aa2.14□□□□□ -2.07
HMGB1P18-201ENST00000438801 MS4A10Q96PG2 267 aa2.14□□□□□ -2.07
HMGB1P18-201ENST00000438801 CDRT15Q96T59 188 aa2.14□□□□□ -2.07
HMGB1P18-201ENST00000438801 ATF6BQ99941 703 aa2.14□□□□□ -2.07
HMGB1P18-201ENST00000438801 PANK2Q9BZ23 570 aa2.14□□□□□ -2.07
HMGB1P18-201ENST00000438801 SLITRK2Q9H156 845 aa2.14□□□□□ -2.07
HMGB1P18-201ENST00000438801 MED29Q9NX70 200 aa2.14□□□□□ -2.07
HMGB1P18-201ENST00000438801 ANAPC11Q9NYG5 84 aa2.14□□□□□ -2.07
HMGB1P18-201ENST00000438801 POLKQ9UBT6 870 aa2.14□□□□□ -2.07
HMGB1P18-201ENST00000438801 SWAP70Q9UH65 585 aa2.14□□□□□ -2.07
HMGB1P18-201ENST00000438801 LNPEPQ9UIQ6 1025 aa2.14□□□□□ -2.07
HMGB1P18-201ENST00000438801 ZNF256Q9Y2P7 627 aaPredicted RBP2.14□□□□□ -2.07
HMGB1P18-201ENST00000438801 MYH2Q9UKX2 1941 aa2.13□□□□□ -2.07
HMGB1P18-201ENST00000438801 ZNF638Q14966 1978 aaKnown RBP2.13□□□□□ -2.07
HMGB1P18-201ENST00000438801 A0A087X0M5 115 aa2.13□□□□□ -2.07
HMGB1P18-201ENST00000438801 A0A1B0GX30 115 aa2.13□□□□□ -2.07
HMGB1P18-201ENST00000438801 B4DLN1 442 aa2.13□□□□□ -2.07
HMGB1P18-201ENST00000438801 K7EQD1 137 aa2.13□□□□□ -2.07
HMGB1P18-201ENST00000438801 O00370 1275 aa2.13□□□□□ -2.07
HMGB1P18-201ENST00000438801 MEIS2O14770 477 aa2.13□□□□□ -2.07
HMGB1P18-201ENST00000438801 ARPC2O15144 300 aa2.13□□□□□ -2.07
HMGB1P18-201ENST00000438801 ZNF354AO60765 605 aaPredicted RBP2.13□□□□□ -2.07
HMGB1P18-201ENST00000438801 HSP90AA1P07900 732 aaKnown RBP2.13□□□□□ -2.07
HMGB1P18-201ENST00000438801 HAPLN1P10915 354 aaPredicted RBP2.13□□□□□ -2.07
HMGB1P18-201ENST00000438801 U2AF2P26368 475 aaKnown RBP eCLIP2.13□□□□□ -2.07
HMGB1P18-201ENST00000438801 HADHAP40939 763 aa2.13□□□□□ -2.07
HMGB1P18-201ENST00000438801 SLC15A1P46059 708 aa2.13□□□□□ -2.07
HMGB1P18-201ENST00000438801 OR3A2P47893 321 aa2.13□□□□□ -2.07
HMGB1P18-201ENST00000438801 HLCSP50747 726 aa2.13□□□□□ -2.07
HMGB1P18-201ENST00000438801 MRPL12P52815 198 aaKnown RBP2.13□□□□□ -2.07
HMGB1P18-201ENST00000438801 CLNS1AP54105 237 aaKnown RBP2.13□□□□□ -2.07
HMGB1P18-201ENST00000438801 MPP1Q00013 466 aa2.13□□□□□ -2.07
HMGB1P18-201ENST00000438801 DHODHQ02127 395 aa2.13□□□□□ -2.07
HMGB1P18-201ENST00000438801 MAPRE1Q15691 268 aaKnown RBP2.13□□□□□ -2.07
HMGB1P18-201ENST00000438801 LIN9Q5TKA1 542 aa2.13□□□□□ -2.07
HMGB1P18-201ENST00000438801 GARNL3Q5VVW2 1013 aa2.13□□□□□ -2.07
HMGB1P18-201ENST00000438801 ARHGAP22Q7Z5H3 698 aa2.13□□□□□ -2.07
HMGB1P18-201ENST00000438801 OR4N5Q8IXE1 308 aa2.13□□□□□ -2.07
HMGB1P18-201ENST00000438801 MMD2Q8IY49 270 aa2.13□□□□□ -2.07
HMGB1P18-201ENST00000438801 LGI2Q8N0V4 545 aa2.13□□□□□ -2.07
HMGB1P18-201ENST00000438801 IQCKQ8N0W5 287 aa2.13□□□□□ -2.07
HMGB1P18-201ENST00000438801 PARP8Q8N3A8 854 aa2.13□□□□□ -2.07
HMGB1P18-201ENST00000438801 TTC39CQ8N584 583 aa2.13□□□□□ -2.07
HMGB1P18-201ENST00000438801 THAP8Q8NA92 274 aa2.13□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms