RNA–Protein interactions for RNA: ENST00000437437.6

NR1I3-210, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 973 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-210ENST00000437437 SDAD1Q9NVU7 687 aaKnown RBP eCLIP12.13□□□□□ -0.47
NR1I3-210ENST00000437437 PTGFRNQ9P2B2 879 aa12.13□□□□□ -0.47
NR1I3-210ENST00000437437 BTNL2Q9UIR0 455 aa12.13□□□□□ -0.47
NR1I3-210ENST00000437437 TUBD1Q9UJT1 453 aa12.13□□□□□ -0.47
NR1I3-210ENST00000437437 PRSS51A0A1B0GVH4 220 aa12.12□□□□□ -0.47
NR1I3-210ENST00000437437 BCAS2O75934 225 aaPredicted RBP12.12□□□□□ -0.47
NR1I3-210ENST00000437437 NT5EP21589 574 aa12.12□□□□□ -0.47
NR1I3-210ENST00000437437 S100A3P33764 101 aa12.12□□□□□ -0.47
NR1I3-210ENST00000437437 CLCN2P51788 898 aa12.12□□□□□ -0.47
NR1I3-210ENST00000437437 POLR2JP52435 117 aaKnown RBP12.12□□□□□ -0.47
NR1I3-210ENST00000437437 LTB4RQ15722 352 aa12.12□□□□□ -0.47
NR1I3-210ENST00000437437 C6orf163Q5TEZ5 329 aa12.12□□□□□ -0.47
NR1I3-210ENST00000437437 PAOXQ6QHF9 649 aa12.12□□□□□ -0.47
NR1I3-210ENST00000437437 BLOC1S3Q6QNY0 202 aa12.12□□□□□ -0.47
NR1I3-210ENST00000437437 MTERF4Q7Z6M4 381 aaKnown RBP12.12□□□□□ -0.47
NR1I3-210ENST00000437437 CPLX4Q7Z7G2 160 aa12.12□□□□□ -0.47
NR1I3-210ENST00000437437 ANKS4BQ8N8V4 417 aa12.12□□□□□ -0.47
NR1I3-210ENST00000437437 OR9I1Q8NGQ6 314 aa12.12□□□□□ -0.47
NR1I3-210ENST00000437437 NUDT8Q8WV74 236 aa12.12□□□□□ -0.47
NR1I3-210ENST00000437437 HOXB13Q92826 284 aaPredicted RBP12.12□□□□□ -0.47
NR1I3-210ENST00000437437 ELP4Q96EB1 424 aa12.12□□□□□ -0.47
NR1I3-210ENST00000437437 CRELD1Q96HD1 420 aa12.12□□□□□ -0.47
NR1I3-210ENST00000437437 CCDC115Q96NT0 180 aa12.12□□□□□ -0.47
NR1I3-210ENST00000437437 ELAC2Q9BQ52 826 aaKnown RBP12.12□□□□□ -0.47
NR1I3-210ENST00000437437 NUDT9Q9BW91 350 aa12.12□□□□□ -0.47
NR1I3-210ENST00000437437 TRIM4Q9C037 500 aa12.12□□□□□ -0.47
NR1I3-210ENST00000437437 OR8D2Q9GZM6 311 aa12.12□□□□□ -0.47
NR1I3-210ENST00000437437 ADNPQ9H2P0 1102 aa12.12□□□□□ -0.47
NR1I3-210ENST00000437437 SAR1AQ9NR31 198 aa12.12□□□□□ -0.47
NR1I3-210ENST00000437437 SIRT3Q9NTG7 399 aaPredicted RBP12.12□□□□□ -0.47
NR1I3-210ENST00000437437 COPS7AQ9UBW8 275 aa12.12□□□□□ -0.47
NR1I3-210ENST00000437437 C19orf53Q9UNZ5 99 aaPredicted RBP12.12□□□□□ -0.47
NR1I3-210ENST00000437437 ERVK-19Q9WJR5 959 aa12.12□□□□□ -0.47
NR1I3-210ENST00000437437 PCDHGB7Q9Y5F8 929 aa12.12□□□□□ -0.47
NR1I3-210ENST00000437437 NBEAQ8NFP9 2946 aa12.11□□□□□ -0.47
NR1I3-210ENST00000437437 NUP214P35658 2090 aaPredicted RBP12.11□□□□□ -0.47
NR1I3-210ENST00000437437 MYOCOSA0A1B0GUC4 107 aa12.11□□□□□ -0.47
NR1I3-210ENST00000437437 A0A1W2PRB8 838 aa12.11□□□□□ -0.47
NR1I3-210ENST00000437437 TMEM200CA6NKL6 621 aa12.11□□□□□ -0.47
NR1I3-210ENST00000437437 A8MUA0 341 aa12.11□□□□□ -0.47
NR1I3-210ENST00000437437 HRKO00198 91 aa12.11□□□□□ -0.47
NR1I3-210ENST00000437437 PRAMEF2O60811 474 aa12.11□□□□□ -0.47
NR1I3-210ENST00000437437 DNAJB5O75953 348 aa12.11□□□□□ -0.47
NR1I3-210ENST00000437437 CELA2AP08217 269 aa12.11□□□□□ -0.47
NR1I3-210ENST00000437437 ITGAMP11215 1152 aa12.11□□□□□ -0.47
NR1I3-210ENST00000437437 TNNI3P19429 210 aa12.11□□□□□ -0.47
NR1I3-210ENST00000437437 MANFP55145 182 aaKnown RBP12.11□□□□□ -0.47
NR1I3-210ENST00000437437 DUSP8Q13202 625 aa12.11□□□□□ -0.47
NR1I3-210ENST00000437437 ZNF267Q14586 743 aaPredicted RBP12.11□□□□□ -0.47
NR1I3-210ENST00000437437 EBPQ15125 230 aaKnown RBP12.11□□□□□ -0.47
NR1I3-210ENST00000437437 COL28A1Q2UY09 1125 aa12.11□□□□□ -0.47
NR1I3-210ENST00000437437 CRB2Q5IJ48 1285 aa12.11□□□□□ -0.47
NR1I3-210ENST00000437437 EXOSC6Q5RKV6 272 aaKnown RBP12.11□□□□□ -0.47
NR1I3-210ENST00000437437 OR4F3Q6IEY1 312 aa12.11□□□□□ -0.47
NR1I3-210ENST00000437437 FAM111BQ6SJ93 734 aa12.11□□□□□ -0.47
NR1I3-210ENST00000437437 IGFL2Q6UWQ7 119 aa12.11□□□□□ -0.47
NR1I3-210ENST00000437437 HSDL2Q6YN16 418 aa12.11□□□□□ -0.47
NR1I3-210ENST00000437437 ZNF551Q7Z340 670 aaPredicted RBP12.11□□□□□ -0.47
NR1I3-210ENST00000437437 C9orf40Q8IXQ3 194 aa12.11□□□□□ -0.47
NR1I3-210ENST00000437437 ZNF321PQ8N8H1 164 aa12.11□□□□□ -0.47
NR1I3-210ENST00000437437 ZNF441Q8N8Z8 693 aa12.11□□□□□ -0.47
NR1I3-210ENST00000437437 VPS37AQ8NEZ2 397 aa12.11□□□□□ -0.47
NR1I3-210ENST00000437437 ADCY4Q8NFM4 1077 aa12.11□□□□□ -0.47
NR1I3-210ENST00000437437 OR7G2Q8NG99 324 aa12.11□□□□□ -0.47
NR1I3-210ENST00000437437 SFXN5Q8TD22 340 aa12.11□□□□□ -0.47
NR1I3-210ENST00000437437 MOAP1Q96BY2 351 aa12.11□□□□□ -0.47
NR1I3-210ENST00000437437 WBP1Q96G27 269 aa12.11□□□□□ -0.47
NR1I3-210ENST00000437437 CCT8L2Q96SF2 557 aa12.11□□□□□ -0.47
NR1I3-210ENST00000437437 SMAD5Q99717 465 aaKnown RBP12.11□□□□□ -0.47
NR1I3-210ENST00000437437 SERHLQ9NQF3 203 aa12.11□□□□□ -0.47
NR1I3-210ENST00000437437 TAS2R9Q9NYW1 312 aa12.11□□□□□ -0.47
NR1I3-210ENST00000437437 ERVK-11Q9UQG0 969 aa12.11□□□□□ -0.47
NR1I3-210ENST00000437437 CFL2Q9Y281 166 aa12.11□□□□□ -0.47
NR1I3-210ENST00000437437 MASP2O00187 686 aa12.1□□□□□ -0.47
NR1I3-210ENST00000437437 UPK1AO00322 258 aa12.1□□□□□ -0.47
NR1I3-210ENST00000437437 CCDC22O60826 627 aa12.1□□□□□ -0.47
NR1I3-210ENST00000437437 COQ9O75208 318 aa12.1□□□□□ -0.47
NR1I3-210ENST00000437437 ZFAND5O76080 213 aa12.1□□□□□ -0.47
NR1I3-210ENST00000437437 NCF2P19878 526 aaPredicted RBP12.1□□□□□ -0.47
NR1I3-210ENST00000437437 ITGA3P26006 1051 aa12.1□□□□□ -0.47
NR1I3-210ENST00000437437 SSTR4P31391 388 aa12.1□□□□□ -0.47
NR1I3-210ENST00000437437 MC3RP41968 323 aa12.1□□□□□ -0.47
NR1I3-210ENST00000437437 EMDP50402 254 aa12.1□□□□□ -0.47
NR1I3-210ENST00000437437 CDK9P50750 372 aaKnown RBP12.1□□□□□ -0.47
NR1I3-210ENST00000437437 PGDP52209 483 aa12.1□□□□□ -0.47
NR1I3-210ENST00000437437 POLE2P56282 527 aa12.1□□□□□ -0.47
NR1I3-210ENST00000437437 NME5P56597 212 aa12.1□□□□□ -0.47
NR1I3-210ENST00000437437 HBA1P69905 142 aa12.1□□□□□ -0.47
NR1I3-210ENST00000437437 RNF4P78317 190 aa12.1□□□□□ -0.47
NR1I3-210ENST00000437437 PSPHP78330 225 aa12.1□□□□□ -0.47
NR1I3-210ENST00000437437 MRPS35P82673 323 aaKnown RBP12.1□□□□□ -0.47
NR1I3-210ENST00000437437 HSPB3Q12988 150 aa12.1□□□□□ -0.47
NR1I3-210ENST00000437437 LINC00303Q3SY05 128 aa12.1□□□□□ -0.47
NR1I3-210ENST00000437437 TRMT12Q53H54 448 aaKnown RBP12.1□□□□□ -0.47
NR1I3-210ENST00000437437 RNF111Q6ZNA4 994 aa12.1□□□□□ -0.47
NR1I3-210ENST00000437437 HPS6Q86YV9 775 aa12.1□□□□□ -0.47
NR1I3-210ENST00000437437 KIF2BQ8N4N8 673 aa12.1□□□□□ -0.47
NR1I3-210ENST00000437437 SLC5A8Q8N695 610 aa12.1□□□□□ -0.47
NR1I3-210ENST00000437437 BRIX1Q8TDN6 353 aaKnown RBP12.1□□□□□ -0.47
NR1I3-210ENST00000437437 THOC3Q96J01 351 aaKnown RBP12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms