RNA–Protein interactions for RNA: ENST00000435607.3

SCN4A-201, Transcript of sodium voltage-gated channel alpha subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN4A, Length 7,805 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4A-201ENST00000435607 ZNF675Q8TD23 568 aa10.71□□□□□ -0.69
SCN4A-201ENST00000435607 C12orf43Q96C57 262 aaKnown RBP10.71□□□□□ -0.69
SCN4A-201ENST00000435607 IGSF21Q96ID5 467 aa10.71□□□□□ -0.69
SCN4A-201ENST00000435607 ENAMQ9NRM1 1142 aa10.71□□□□□ -0.69
SCN4A-201ENST00000435607 CUEDC1Q9NWM3 386 aaPredicted RBP10.71□□□□□ -0.69
SCN4A-201ENST00000435607 C11orf97A0A1B0GVM6 126 aaPredicted RBP10.71□□□□□ -0.7
SCN4A-201ENST00000435607 A6NIZ1 184 aa10.71□□□□□ -0.7
SCN4A-201ENST00000435607 AXIN1O15169 862 aa10.71□□□□□ -0.7
SCN4A-201ENST00000435607 PNMTP11086 282 aa10.71□□□□□ -0.7
SCN4A-201ENST00000435607 TIMP2P16035 220 aa10.71□□□□□ -0.7
SCN4A-201ENST00000435607 ZNF14P17017 642 aaPredicted RBP10.71□□□□□ -0.7
SCN4A-201ENST00000435607 POU3F2P20265 443 aaPredicted RBP10.71□□□□□ -0.7
SCN4A-201ENST00000435607 RAP1BP61224 184 aa10.71□□□□□ -0.7
SCN4A-201ENST00000435607 PCBD1P61457 104 aa10.71□□□□□ -0.7
SCN4A-201ENST00000435607 RAP1AP62834 184 aa10.71□□□□□ -0.7
SCN4A-201ENST00000435607 NDUFAF4Q9P032 175 aa10.71□□□□□ -0.7
SCN4A-201ENST00000435607 PTRH2Q9Y3E5 179 aaKnown RBP10.71□□□□□ -0.7
SCN4A-201ENST00000435607 LATO43561 262 aa10.71□□□□□ -0.7
SCN4A-201ENST00000435607 UBL4AP11441 157 aa10.71□□□□□ -0.7
SCN4A-201ENST00000435607 AK4P27144 223 aaPredicted RBP10.71□□□□□ -0.7
SCN4A-201ENST00000435607 LPAL2Q16609 132 aa10.71□□□□□ -0.7
SCN4A-201ENST00000435607 SOWAHAQ2M3V2 549 aa10.71□□□□□ -0.7
SCN4A-201ENST00000435607 GSG1LQ6UXU4 331 aa10.71□□□□□ -0.7
SCN4A-201ENST00000435607 RBMS3Q6XE24 437 aaKnown RBP10.71□□□□□ -0.7
SCN4A-201ENST00000435607 ZNF681Q96N22 645 aa10.71□□□□□ -0.7
SCN4A-201ENST00000435607 DCSTAMPQ9H295 470 aa10.71□□□□□ -0.7
SCN4A-201ENST00000435607 AKTIPQ9H8T0 292 aa10.71□□□□□ -0.7
SCN4A-201ENST00000435607 MTMR11A4FU01 709 aa10.71□□□□□ -0.7
SCN4A-201ENST00000435607 AURKAO14965 403 aa10.71□□□□□ -0.7
SCN4A-201ENST00000435607 WDPCPO95876 746 aa10.71□□□□□ -0.7
SCN4A-201ENST00000435607 C1GALT1C1LP0DN25 315 aa10.71□□□□□ -0.7
SCN4A-201ENST00000435607 ADRB3P13945 408 aa10.71□□□□□ -0.7
SCN4A-201ENST00000435607 FPR1P21462 350 aa10.71□□□□□ -0.7
SCN4A-201ENST00000435607 AGTR1P30556 359 aa10.71□□□□□ -0.7
SCN4A-201ENST00000435607 DEFB134Q4QY38 66 aa10.71□□□□□ -0.7
SCN4A-201ENST00000435607 ARSHQ5FYA8 562 aa10.71□□□□□ -0.7
SCN4A-201ENST00000435607 PRAMEF8Q5VWM4 474 aa10.71□□□□□ -0.7
SCN4A-201ENST00000435607 PRAMEF7Q5VXH5 474 aa10.71□□□□□ -0.7
SCN4A-201ENST00000435607 AWAT2Q6E213 333 aa10.71□□□□□ -0.7
SCN4A-201ENST00000435607 GPR149Q86SP6 731 aa10.71□□□□□ -0.7
SCN4A-201ENST00000435607 ZNF695Q8IW36 515 aa10.71□□□□□ -0.7
SCN4A-201ENST00000435607 OR4N2Q8NGD1 307 aa10.71□□□□□ -0.7
SCN4A-201ENST00000435607 ZNF431Q8TF32 576 aaPredicted RBP10.71□□□□□ -0.7
SCN4A-201ENST00000435607 TSACCQ96A04 125 aaPredicted RBP10.71□□□□□ -0.7
SCN4A-201ENST00000435607 DMRTB1Q96MA1 342 aa10.71□□□□□ -0.7
SCN4A-201ENST00000435607 BARD1Q99728 777 aaKnown RBP10.71□□□□□ -0.7
SCN4A-201ENST00000435607 WACQ9BTA9 647 aa10.71□□□□□ -0.7
SCN4A-201ENST00000435607 LMAN1LQ9HAT1 526 aa10.71□□□□□ -0.7
SCN4A-201ENST00000435607 AFDNP55196 1824 aaKnown RBP10.7□□□□□ -0.7
SCN4A-201ENST00000435607 SOCS2O14508 198 aa10.7□□□□□ -0.7
SCN4A-201ENST00000435607 PAX7P23759 505 aa10.7□□□□□ -0.7
SCN4A-201ENST00000435607 F2RL1P55085 397 aa10.7□□□□□ -0.7
SCN4A-201ENST00000435607 NIPA2Q8N8Q9 360 aa10.7□□□□□ -0.7
SCN4A-201ENST00000435607 LSM14AQ8ND56 463 aaKnown RBP10.7□□□□□ -0.7
SCN4A-201ENST00000435607 SMG9Q9H0W8 520 aaKnown RBP10.7□□□□□ -0.7
SCN4A-201ENST00000435607 OR10A5Q9H207 317 aa10.7□□□□□ -0.7
SCN4A-201ENST00000435607 OR10A2Q9H208 303 aa10.7□□□□□ -0.7
SCN4A-201ENST00000435607 B4GALT6Q9UBX8 382 aa10.7□□□□□ -0.7
SCN4A-201ENST00000435607 TMEM184BQ9Y519 407 aaPredicted RBP10.7□□□□□ -0.7
SCN4A-201ENST00000435607 ADGRB2O60241 1585 aa10.7□□□□□ -0.7
SCN4A-201ENST00000435607 SLC22A31A6NKX4 558 aa10.7□□□□□ -0.7
SCN4A-201ENST00000435607 SEC14L2O76054 403 aa10.7□□□□□ -0.7
SCN4A-201ENST00000435607 CLEC3BP05452 202 aa10.7□□□□□ -0.7
SCN4A-201ENST00000435607 SLC9A3P48764 834 aa10.7□□□□□ -0.7
SCN4A-201ENST00000435607 ZNF517Q6ZMY9 492 aaPredicted RBP10.7□□□□□ -0.7
SCN4A-201ENST00000435607 RBM12BQ8IXT5 1001 aaKnown RBP10.7□□□□□ -0.7
SCN4A-201ENST00000435607 PACRGLQ8N7B6 248 aa10.7□□□□□ -0.7
SCN4A-201ENST00000435607 METTL2AQ96IZ6 378 aaKnown RBP10.7□□□□□ -0.7
SCN4A-201ENST00000435607 C12orf42Q96LP6 360 aa10.7□□□□□ -0.7
SCN4A-201ENST00000435607 SLC19A3Q9BZV2 496 aa10.7□□□□□ -0.7
SCN4A-201ENST00000435607 KCNK5O95279 499 aa10.7□□□□□ -0.7
SCN4A-201ENST00000435607 OR12D1P0DN82 309 aa10.7□□□□□ -0.7
SCN4A-201ENST00000435607 IL3RAP26951 378 aa10.7□□□□□ -0.7
SCN4A-201ENST00000435607 OR5B2Q96R09 309 aa10.7□□□□□ -0.7
SCN4A-201ENST00000435607 CNN2Q99439 309 aaKnown RBP10.7□□□□□ -0.7
SCN4A-201ENST00000435607 CENPOQ9BU64 300 aa10.7□□□□□ -0.7
SCN4A-201ENST00000435607 FAAHO00519 579 aa10.7□□□□□ -0.7
SCN4A-201ENST00000435607 LILRB3O75022 631 aa10.7□□□□□ -0.7
SCN4A-201ENST00000435607 ETS2P15036 469 aa10.7□□□□□ -0.7
SCN4A-201ENST00000435607 RPS2P15880 293 aaKnown RBP10.7□□□□□ -0.7
SCN4A-201ENST00000435607 ADH7P40394 386 aa10.7□□□□□ -0.7
SCN4A-201ENST00000435607 CX3CR1P49238 355 aa10.7□□□□□ -0.7
SCN4A-201ENST00000435607 FADDQ13158 208 aa10.7□□□□□ -0.7
SCN4A-201ENST00000435607 HAGHLQ6PII5 290 aaPredicted RBP10.7□□□□□ -0.7
SCN4A-201ENST00000435607 TMEM205Q6UW68 189 aa10.7□□□□□ -0.7
SCN4A-201ENST00000435607 MSLNLQ96KJ4 702 aa10.7□□□□□ -0.7
SCN4A-201ENST00000435607 COQ10BQ9H8M1 238 aa10.7□□□□□ -0.7
SCN4A-201ENST00000435607 DECR2Q9NUI1 292 aa10.7□□□□□ -0.7
SCN4A-201ENST00000435607 LRFN1Q9P244 771 aa10.7□□□□□ -0.7
SCN4A-201ENST00000435607 TRBV2A0A0J9YWF9 115 aa10.7□□□□□ -0.7
SCN4A-201ENST00000435607 OR51F1A6NGY5 319 aa10.7□□□□□ -0.7
SCN4A-201ENST00000435607 CREG1O75629 220 aa10.7□□□□□ -0.7
SCN4A-201ENST00000435607 MPC1LP0DKB6 136 aa10.7□□□□□ -0.7
SCN4A-201ENST00000435607 HNRNPA2B1P22626 353 aaKnown RBP10.7□□□□□ -0.7
SCN4A-201ENST00000435607 ACVRL1P37023 503 aa10.7□□□□□ -0.7
SCN4A-201ENST00000435607 CHRNA4P43681 627 aa10.7□□□□□ -0.7
SCN4A-201ENST00000435607 EEF1A2Q05639 463 aaKnown RBP10.7□□□□□ -0.7
SCN4A-201ENST00000435607 MPP7Q5T2T1 576 aa10.7□□□□□ -0.7
SCN4A-201ENST00000435607 TMPRSS12Q86WS5 348 aa10.7□□□□□ -0.7
SCN4A-201ENST00000435607 OR1J2Q8NGS2 313 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms