RNA–Protein interactions for RNA: ENST00000428696.6

SGCE-204, Transcript of sarcoglycan epsilon, humanhuman

TSL 1 (best) BASIC

Gene SGCE, Length 1,409 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-204ENST00000428696 RGS9BPQ6ZS82 235 aa13.53□□□□□ -0.24
SGCE-204ENST00000428696 TMEM156Q8N614 296 aa13.53□□□□□ -0.24
SGCE-204ENST00000428696 OR52R1Q8NGF1 315 aa13.53□□□□□ -0.24
SGCE-204ENST00000428696 RFWD2Q8NHY2 731 aa13.53□□□□□ -0.24
SGCE-204ENST00000428696 ZFP28Q8NHY6 868 aa13.53□□□□□ -0.24
SGCE-204ENST00000428696 SUN3Q8TAQ9 357 aa13.53□□□□□ -0.24
SGCE-204ENST00000428696 ACTRT2Q8TDY3 377 aa13.53□□□□□ -0.24
SGCE-204ENST00000428696 MTERF3Q96E29 417 aa13.53□□□□□ -0.24
SGCE-204ENST00000428696 AMDHD1Q96NU7 426 aa13.53□□□□□ -0.24
SGCE-204ENST00000428696 ZBTB18Q99592 522 aa13.53□□□□□ -0.24
SGCE-204ENST00000428696 EBF4Q9BQW3 602 aa13.53□□□□□ -0.24
SGCE-204ENST00000428696 UTP23Q9BRU9 249 aaKnown RBP13.53□□□□□ -0.24
SGCE-204ENST00000428696 OR10A5Q9H207 317 aa13.53□□□□□ -0.24
SGCE-204ENST00000428696 GLIPR2Q9H4G4 154 aa13.53□□□□□ -0.24
SGCE-204ENST00000428696 FGFR1OP2Q9NVK5 253 aa13.53□□□□□ -0.24
SGCE-204ENST00000428696 TAS2R7Q9NYW3 318 aa13.53□□□□□ -0.24
SGCE-204ENST00000428696 MAT2BQ9NZL9 334 aa13.53□□□□□ -0.24
SGCE-204ENST00000428696 ZNF223Q9UK11 482 aaPredicted RBP13.53□□□□□ -0.24
SGCE-204ENST00000428696 SNX8Q9Y5X2 465 aa13.53□□□□□ -0.24
SGCE-204ENST00000428696 CACNA1GO43497 2377 aa13.53□□□□□ -0.24
SGCE-204ENST00000428696 IGSF10Q6WRI0 2623 aa13.52□□□□□ -0.24
SGCE-204ENST00000428696 C2orf92A0A1B0GVN3 265 aa13.52□□□□□ -0.25
SGCE-204ENST00000428696 A0A1W2PRB8 838 aa13.52□□□□□ -0.25
SGCE-204ENST00000428696 MYO1GB0I1T2 1018 aa13.52□□□□□ -0.25
SGCE-204ENST00000428696 C9JVG2 144 aa13.52□□□□□ -0.25
SGCE-204ENST00000428696 NME6O75414 186 aaPredicted RBP13.52□□□□□ -0.25
SGCE-204ENST00000428696 ITGA10O75578 1167 aa13.52□□□□□ -0.25
SGCE-204ENST00000428696 OR2J2O76002 312 aa13.52□□□□□ -0.25
SGCE-204ENST00000428696 ABCB1P08183 1280 aaPredicted RBP13.52□□□□□ -0.25
SGCE-204ENST00000428696 ALDOCP09972 364 aaKnown RBP13.52□□□□□ -0.25
SGCE-204ENST00000428696 TROVE2P10155 538 aaKnown RBP eCLIP13.52□□□□□ -0.25
SGCE-204ENST00000428696 NCF2P19878 526 aaPredicted RBP13.52□□□□□ -0.25
SGCE-204ENST00000428696 GALNSP34059 522 aa13.52□□□□□ -0.25
SGCE-204ENST00000428696 CASRP41180 1078 aa13.52□□□□□ -0.25
SGCE-204ENST00000428696 CD97P48960 835 aa13.52□□□□□ -0.25
SGCE-204ENST00000428696 UFM1P61960 85 aa13.52□□□□□ -0.25
SGCE-204ENST00000428696 SPRED3Q2MJR0 410 aa13.52□□□□□ -0.25
SGCE-204ENST00000428696 NADK2Q4G0N4 442 aa13.52□□□□□ -0.25
SGCE-204ENST00000428696 SOWAHCQ53LP3 525 aaPredicted RBP13.52□□□□□ -0.25
SGCE-204ENST00000428696 H3F3CQ6NXT2 135 aa13.52□□□□□ -0.25
SGCE-204ENST00000428696 LRRC34Q8IZ02 419 aa13.52□□□□□ -0.25
SGCE-204ENST00000428696 SIMC1Q8NDZ2 872 aa13.52□□□□□ -0.25
SGCE-204ENST00000428696 ZBED6CLQ96FA7 236 aaPredicted RBP13.52□□□□□ -0.25
SGCE-204ENST00000428696 DDX18Q9NVP1 670 aaKnown RBP13.52□□□□□ -0.25
SGCE-204ENST00000428696 ASIC5Q9NY37 505 aa13.52□□□□□ -0.25
SGCE-204ENST00000428696 ATP6V1HQ9UI12 483 aa13.52□□□□□ -0.25
SGCE-204ENST00000428696 PPIEQ9UNP9 301 aaKnown RBP13.52□□□□□ -0.25
SGCE-204ENST00000428696 PCDHGB7Q9Y5F8 929 aa13.52□□□□□ -0.25
SGCE-204ENST00000428696 HEMK1Q9Y5R4 338 aaPredicted RBP13.52□□□□□ -0.25
SGCE-204ENST00000428696 BOD1L1Q8NFC6 3051 aa13.52□□□□□ -0.25
SGCE-204ENST00000428696 IGKV3-11P04433 115 aa13.51□□□□□ -0.25
SGCE-204ENST00000428696 IDO1P14902 403 aa13.51□□□□□ -0.25
SGCE-204ENST00000428696 SOX11P35716 441 aa13.51□□□□□ -0.25
SGCE-204ENST00000428696 CD96P40200 585 aa13.51□□□□□ -0.25
SGCE-204ENST00000428696 MC3RP41968 323 aa13.51□□□□□ -0.25
SGCE-204ENST00000428696 SSR4P51571 173 aa13.51□□□□□ -0.25
SGCE-204ENST00000428696 NR0B1P51843 470 aaKnown RBP13.51□□□□□ -0.25
SGCE-204ENST00000428696 SLC37A1P57057 533 aa13.51□□□□□ -0.25
SGCE-204ENST00000428696 MLF1P58340 268 aa13.51□□□□□ -0.25
SGCE-204ENST00000428696 STX1BP61266 288 aa13.51□□□□□ -0.25
SGCE-204ENST00000428696 MGAT2Q10469 447 aa13.51□□□□□ -0.25
SGCE-204ENST00000428696 NNATQ16517 81 aa13.51□□□□□ -0.25
SGCE-204ENST00000428696 SPDYE7PQ495Y7 208 aa13.51□□□□□ -0.25
SGCE-204ENST00000428696 OGFOD2Q6N063 350 aa13.51□□□□□ -0.25
SGCE-204ENST00000428696 IL20RBQ6UXL0 311 aa13.51□□□□□ -0.25
SGCE-204ENST00000428696 C9orf40Q8IXQ3 194 aa13.51□□□□□ -0.25
SGCE-204ENST00000428696 LSM14AQ8ND56 463 aaKnown RBP13.51□□□□□ -0.25
SGCE-204ENST00000428696 OR7G1Q8NGA0 311 aa13.51□□□□□ -0.25
SGCE-204ENST00000428696 ASB15Q8WXK1 588 aa13.51□□□□□ -0.25
SGCE-204ENST00000428696 NPAS2Q99743 824 aa13.51□□□□□ -0.25
SGCE-204ENST00000428696 DUSP26Q9BV47 211 aa13.51□□□□□ -0.25
SGCE-204ENST00000428696 WWTR1Q9GZV5 400 aa13.51□□□□□ -0.25
SGCE-204ENST00000428696 SLAMF7Q9NQ25 335 aa13.51□□□□□ -0.25
SGCE-204ENST00000428696 AIG1Q9NVV5 245 aa13.51□□□□□ -0.25
SGCE-204ENST00000428696 MYOTQ9UBF9 498 aa13.51□□□□□ -0.25
SGCE-204ENST00000428696 ERVK-11Q9UQG0 969 aa13.51□□□□□ -0.25
SGCE-204ENST00000428696 YARS2Q9Y2Z4 477 aaKnown RBP13.51□□□□□ -0.25
SGCE-204ENST00000428696 CSAG2Q9Y5P2 127 aa13.51□□□□□ -0.25
SGCE-204ENST00000428696 ATRXP46100 2492 aa13.51□□□□□ -0.25
SGCE-204ENST00000428696 OR6C76A6NM76 312 aa13.5□□□□□ -0.25
SGCE-204ENST00000428696 SLC22A3O75751 556 aa13.5□□□□□ -0.25
SGCE-204ENST00000428696 S100A3P33764 101 aa13.5□□□□□ -0.25
SGCE-204ENST00000428696 DGKQP52824 942 aa13.5□□□□□ -0.25
SGCE-204ENST00000428696 FUT7Q11130 342 aa13.5□□□□□ -0.25
SGCE-204ENST00000428696 KLRB1Q12918 225 aa13.5□□□□□ -0.25
SGCE-204ENST00000428696 PDE7AQ13946 482 aa13.5□□□□□ -0.25
SGCE-204ENST00000428696 MPEG1Q2M385 716 aa13.5□□□□□ -0.25
SGCE-204ENST00000428696 PLEKHN1Q494U1 663 aaPredicted RBP13.5□□□□□ -0.25
SGCE-204ENST00000428696 ZNF628Q5EBL2 1059 aa13.5□□□□□ -0.25
SGCE-204ENST00000428696 LCE2DQ5TA82 110 aaPredicted RBP13.5□□□□□ -0.25
SGCE-204ENST00000428696 SPINK14Q6IE38 97 aa13.5□□□□□ -0.25
SGCE-204ENST00000428696 OR4F3Q6IEY1 312 aa13.5□□□□□ -0.25
SGCE-204ENST00000428696 ANKRD46Q86W74 232 aa13.5□□□□□ -0.25
SGCE-204ENST00000428696 MIER2Q8N344 545 aa13.5□□□□□ -0.25
SGCE-204ENST00000428696 RBMXL3Q8N7X1 1067 aaKnown RBP13.5□□□□□ -0.25
SGCE-204ENST00000428696 ZNF615Q8N8J6 731 aa13.5□□□□□ -0.25
SGCE-204ENST00000428696 OR7G2Q8NG99 324 aa13.5□□□□□ -0.25
SGCE-204ENST00000428696 OR5M3Q8NGP4 307 aa13.5□□□□□ -0.25
SGCE-204ENST00000428696 MAELQ96JY0 434 aaKnown RBP13.5□□□□□ -0.25
SGCE-204ENST00000428696 FAM107BQ9H098 131 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms