RNA–Protein interactions for RNA: ENST00000428014.1

SMC1A-203, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 3

Gene SMC1A, Length 868 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-203ENST00000428014 ZNF780BQ9Y6R6 833 aa8.46□□□□□ -1.06
SMC1A-203ENST00000428014 ICE1Q9Y2F5 2266 aa8.46□□□□□ -1.06
SMC1A-203ENST00000428014 HECTD1Q9ULT8 2610 aa8.46□□□□□ -1.06
SMC1A-203ENST00000428014 GTF3C1Q12789 2109 aa8.45□□□□□ -1.06
SMC1A-203ENST00000428014 A0A1B0GVC2 190 aa8.45□□□□□ -1.06
SMC1A-203ENST00000428014 TLDC2A0PJX2 215 aa8.45□□□□□ -1.06
SMC1A-203ENST00000428014 WASHC1A8K0Z3 465 aa8.45□□□□□ -1.06
SMC1A-203ENST00000428014 TMEM114B3SHH9 223 aa8.45□□□□□ -1.06
SMC1A-203ENST00000428014 ACOT7O00154 380 aa8.45□□□□□ -1.06
SMC1A-203ENST00000428014 TP53I11O14683 189 aa8.45□□□□□ -1.06
SMC1A-203ENST00000428014 PGRMC2O15173 223 aa8.45□□□□□ -1.06
SMC1A-203ENST00000428014 RGS16O15492 202 aaPredicted RBP8.45□□□□□ -1.06
SMC1A-203ENST00000428014 CTIFO43310 598 aaKnown RBP8.45□□□□□ -1.06
SMC1A-203ENST00000428014 LYPLA1O75608 230 aaPredicted RBP8.45□□□□□ -1.06
SMC1A-203ENST00000428014 OR2J2O76002 312 aa8.45□□□□□ -1.06
SMC1A-203ENST00000428014 GLSO94925 669 aaPredicted RBP8.45□□□□□ -1.06
SMC1A-203ENST00000428014 SNX4O95219 450 aa8.45□□□□□ -1.06
SMC1A-203ENST00000428014 NADKO95544 446 aaPredicted RBP8.45□□□□□ -1.06
SMC1A-203ENST00000428014 LDLRP01130 860 aa8.45□□□□□ -1.06
SMC1A-203ENST00000428014 IGHG3P01860 377 aa8.45□□□□□ -1.06
SMC1A-203ENST00000428014 BPGMP07738 259 aa8.45□□□□□ -1.06
SMC1A-203ENST00000428014 HOXD4P09016 255 aaPredicted RBP8.45□□□□□ -1.06
SMC1A-203ENST00000428014 ZNF24P17028 368 aa8.45□□□□□ -1.06
SMC1A-203ENST00000428014 CNR1P21554 472 aa8.45□□□□□ -1.06
SMC1A-203ENST00000428014 DRD5P21918 477 aa8.45□□□□□ -1.06
SMC1A-203ENST00000428014 GNLYP22749 145 aa8.45□□□□□ -1.06
SMC1A-203ENST00000428014 MAPK1P28482 360 aa8.45□□□□□ -1.06
SMC1A-203ENST00000428014 FRKP42685 505 aaPredicted RBP8.45□□□□□ -1.06
SMC1A-203ENST00000428014 NRG3P56975 720 aa8.45□□□□□ -1.06
SMC1A-203ENST00000428014 RAE1P78406 368 aaKnown RBP8.45□□□□□ -1.06
SMC1A-203ENST00000428014 ALDH6A1Q02252 535 aaKnown RBP8.45□□□□□ -1.06
SMC1A-203ENST00000428014 SRSF1Q07955 248 aaKnown RBP eCLIP8.45□□□□□ -1.064e-6■□□□□ 10.9
SMC1A-203ENST00000428014 MGAT2Q10469 447 aa8.45□□□□□ -1.06
SMC1A-203ENST00000428014 MLC1Q15049 377 aa8.45□□□□□ -1.06
SMC1A-203ENST00000428014 UGT3A2Q3SY77 523 aa8.45□□□□□ -1.06
SMC1A-203ENST00000428014 KRT71Q3SY84 523 aa8.45□□□□□ -1.06
SMC1A-203ENST00000428014 PRR30Q53SZ7 412 aaPredicted RBP8.45□□□□□ -1.06
SMC1A-203ENST00000428014 XKR7Q5GH72 579 aa8.45□□□□□ -1.06
SMC1A-203ENST00000428014 SPINK14Q6IE38 97 aa8.45□□□□□ -1.06
SMC1A-203ENST00000428014 FAM71E1Q6IPT2 247 aa8.45□□□□□ -1.06
SMC1A-203ENST00000428014 RPTNQ6XPR3 784 aa8.45□□□□□ -1.06
SMC1A-203ENST00000428014 GALNTL5Q7Z4T8 443 aa8.45□□□□□ -1.06
SMC1A-203ENST00000428014 CLNKQ7Z7G1 428 aa8.45□□□□□ -1.06
SMC1A-203ENST00000428014 C10orf107Q8IVU9 208 aa8.45□□□□□ -1.06
SMC1A-203ENST00000428014 C9orf40Q8IXQ3 194 aa8.45□□□□□ -1.06
SMC1A-203ENST00000428014 C4orf33Q8N1A6 199 aa8.45□□□□□ -1.06
SMC1A-203ENST00000428014 FBXW8Q8N3Y1 598 aa8.45□□□□□ -1.06
SMC1A-203ENST00000428014 RNF175Q8N4F7 328 aa8.45□□□□□ -1.06
SMC1A-203ENST00000428014 CCNYL1Q8N7R7 359 aa8.45□□□□□ -1.06
SMC1A-203ENST00000428014 CCDC63Q8NA47 563 aa8.45□□□□□ -1.06
SMC1A-203ENST00000428014 HOXB13Q92826 284 aaPredicted RBP8.45□□□□□ -1.06
SMC1A-203ENST00000428014 ADIPOR1Q96A54 375 aa8.45□□□□□ -1.06
SMC1A-203ENST00000428014 C19orf60Q96EN9 201 aa8.45□□□□□ -1.06
SMC1A-203ENST00000428014 CNRIP1Q96F85 164 aaPredicted RBP8.45□□□□□ -1.06
SMC1A-203ENST00000428014 PPP3R2Q96LZ3 170 aa8.45□□□□□ -1.06
SMC1A-203ENST00000428014 SORBS1Q9BX66 1292 aaKnown RBP8.45□□□□□ -1.06
SMC1A-203ENST00000428014 WWTR1Q9GZV5 400 aa8.45□□□□□ -1.06
SMC1A-203ENST00000428014 OR10A5Q9H207 317 aa8.45□□□□□ -1.06
SMC1A-203ENST00000428014 SLC35C2Q9NQQ7 365 aa8.45□□□□□ -1.06
SMC1A-203ENST00000428014 SACM1LQ9NTJ5 587 aa8.45□□□□□ -1.06
SMC1A-203ENST00000428014 ACSS1Q9NUB1 689 aaPredicted RBP8.45□□□□□ -1.06
SMC1A-203ENST00000428014 ASIC5Q9NY37 505 aa8.45□□□□□ -1.06
SMC1A-203ENST00000428014 MAT2BQ9NZL9 334 aa8.45□□□□□ -1.06
SMC1A-203ENST00000428014 NTMQ9P121 344 aa8.45□□□□□ -1.06
SMC1A-203ENST00000428014 DLGAP4Q9Y2H0 992 aa8.45□□□□□ -1.06
SMC1A-203ENST00000428014 DNAJC15Q9Y5T4 150 aa8.45□□□□□ -1.06
SMC1A-203ENST00000428014 DNAJC13O75165 2243 aa8.44□□□□□ -1.06
SMC1A-203ENST00000428014 C2orf92A0A1B0GVN3 265 aa8.44□□□□□ -1.06
SMC1A-203ENST00000428014 GNG14A0A1W2PPG7 69 aa8.44□□□□□ -1.06
SMC1A-203ENST00000428014 MYO1GB0I1T2 1018 aa8.44□□□□□ -1.06
SMC1A-203ENST00000428014 ASNA1O43681 348 aa8.44□□□□□ -1.06
SMC1A-203ENST00000428014 SUSD5O60279 629 aa8.44□□□□□ -1.06
SMC1A-203ENST00000428014 HCN1O60741 890 aa8.44□□□□□ -1.06
SMC1A-203ENST00000428014 CRCPO75575 148 aa8.44□□□□□ -1.06
SMC1A-203ENST00000428014 PSMG1O95456 288 aa8.44□□□□□ -1.06
SMC1A-203ENST00000428014 CLPSP04118 112 aa8.44□□□□□ -1.06
SMC1A-203ENST00000428014 ANXA4P09525 319 aaPredicted RBP8.44□□□□□ -1.06
SMC1A-203ENST00000428014 ELAVL4P26378 380 aaKnown RBP8.44□□□□□ -1.06
SMC1A-203ENST00000428014 ALDH3A1P30838 453 aa8.44□□□□□ -1.06
SMC1A-203ENST00000428014 LCN1P31025 176 aa8.44□□□□□ -1.06
SMC1A-203ENST00000428014 CA7P43166 264 aa8.44□□□□□ -1.06
SMC1A-203ENST00000428014 PPICP45877 212 aa8.44□□□□□ -1.06
SMC1A-203ENST00000428014 CASP6P55212 293 aa8.44□□□□□ -1.06
SMC1A-203ENST00000428014 ERVK-8P63133 956 aa8.44□□□□□ -1.06
SMC1A-203ENST00000428014 MRPS22P82650 360 aaKnown RBP8.44□□□□□ -1.06
SMC1A-203ENST00000428014 MAD2L1Q13257 205 aaPredicted RBP8.44□□□□□ -1.06
SMC1A-203ENST00000428014 PDE7AQ13946 482 aa8.44□□□□□ -1.06
SMC1A-203ENST00000428014 ZNF267Q14586 743 aaPredicted RBP8.44□□□□□ -1.06
SMC1A-203ENST00000428014 RPS6KA2Q15349 733 aa8.44□□□□□ -1.06
SMC1A-203ENST00000428014 IMPG1Q17R60 797 aa8.44□□□□□ -1.06
SMC1A-203ENST00000428014 ZNF628Q5EBL2 1059 aa8.44□□□□□ -1.06
SMC1A-203ENST00000428014 COLEC12Q5KU26 742 aa8.44□□□□□ -1.06
SMC1A-203ENST00000428014 ZNF468Q5VIY5 522 aaPredicted RBP8.44□□□□□ -1.06
SMC1A-203ENST00000428014 SLC22A10Q63ZE4 541 aa8.44□□□□□ -1.06
SMC1A-203ENST00000428014 NOXRED1Q6NXP6 359 aa8.44□□□□□ -1.06
SMC1A-203ENST00000428014 ARHGAP11AQ6P4F7 1023 aa8.44□□□□□ -1.06
SMC1A-203ENST00000428014 ZCCHC12Q6PEW1 402 aa8.44□□□□□ -1.06
SMC1A-203ENST00000428014 Q6ZSR9 355 aa8.44□□□□□ -1.06
SMC1A-203ENST00000428014 R3HCC1LQ7Z5L2 792 aaKnown RBP8.44□□□□□ -1.06
SMC1A-203ENST00000428014 SLC22A16Q86VW1 577 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms