RNA–Protein interactions for RNA: ENST00000427710.5

RTN4-210, Transcript of reticulon 4, humanhuman

TSL 4

Gene RTN4, Length 589 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-210ENST00000427710 ZNF780BQ9Y6R6 833 aa13.74□□□□□ -0.21
RTN4-210ENST00000427710 GOLGA6L10A6NI86 522 aa13.73□□□□□ -0.21
RTN4-210ENST00000427710 CYSRT1A8MQ03 144 aa13.73□□□□□ -0.21
RTN4-210ENST00000427710 KLRC4-KLRK1H3BQV0 150 aa13.73□□□□□ -0.21
RTN4-210ENST00000427710 HS6ST1O60243 411 aa13.73□□□□□ -0.21
RTN4-210ENST00000427710 NPHS1O60500 1241 aa13.73□□□□□ -0.21
RTN4-210ENST00000427710 BPGMP07738 259 aa13.73□□□□□ -0.21
RTN4-210ENST00000427710 LINC00032P0C843 101 aa13.73□□□□□ -0.21
RTN4-210ENST00000427710 PCSK2P16519 638 aa13.73□□□□□ -0.21
RTN4-210ENST00000427710 ZNF24P17028 368 aa13.73□□□□□ -0.21
RTN4-210ENST00000427710 CSNK2A2P19784 350 aaPredicted RBP13.73□□□□□ -0.21
RTN4-210ENST00000427710 MRPS35P82673 323 aaKnown RBP13.73□□□□□ -0.21
RTN4-210ENST00000427710 FUT7Q11130 342 aa13.73□□□□□ -0.21
RTN4-210ENST00000427710 NNATQ16517 81 aa13.73□□□□□ -0.21
RTN4-210ENST00000427710 TRMT12Q53H54 448 aaKnown RBP13.73□□□□□ -0.21
RTN4-210ENST00000427710 ARL13AQ5H913 290 aaPredicted RBP13.73□□□□□ -0.21
RTN4-210ENST00000427710 CES4AQ5XG92 561 aa13.73□□□□□ -0.21
RTN4-210ENST00000427710 OPN5Q6U736 354 aa13.73□□□□□ -0.21
RTN4-210ENST00000427710 RTL4Q6ZR62 310 aa13.73□□□□□ -0.21
RTN4-210ENST00000427710 TRIM46Q7Z4K8 759 aa13.73□□□□□ -0.21
RTN4-210ENST00000427710 GPALPP1Q8IXQ4 340 aa13.73□□□□□ -0.21
RTN4-210ENST00000427710 SLC22A8Q8TCC7 542 aa13.73□□□□□ -0.21
RTN4-210ENST00000427710 KAT2AQ92830 837 aa13.73□□□□□ -0.21
RTN4-210ENST00000427710 RRAGDQ9NQL2 400 aaPredicted RBP13.73□□□□□ -0.21
RTN4-210ENST00000427710 SDAD1Q9NVU7 687 aaKnown RBP eCLIP13.73□□□□□ -0.212e-17■■□□□ 11.9
RTN4-210ENST00000427710 GIMAP2Q9UG22 337 aa13.73□□□□□ -0.21
RTN4-210ENST00000427710 PSME2Q9UL46 239 aa13.73□□□□□ -0.21
RTN4-210ENST00000427710 NCOA6Q14686 2063 aaPredicted RBP13.73□□□□□ -0.21
RTN4-210ENST00000427710 TRGV8A0A0C4DH27 118 aa13.72□□□□□ -0.21
RTN4-210ENST00000427710 C2orf92A0A1B0GVN3 265 aa13.72□□□□□ -0.21
RTN4-210ENST00000427710 OR6C76A6NM76 312 aa13.72□□□□□ -0.21
RTN4-210ENST00000427710 FAM166BA8MTA8 275 aa13.72□□□□□ -0.21
RTN4-210ENST00000427710 H3BQF6 201 aa13.72□□□□□ -0.21
RTN4-210ENST00000427710 TFECO14948 347 aaPredicted RBP13.72□□□□□ -0.21
RTN4-210ENST00000427710 CTIFO43310 598 aaKnown RBP13.72□□□□□ -0.21
RTN4-210ENST00000427710 CDC40O60508 579 aaKnown RBP eCLIP13.72□□□□□ -0.21
RTN4-210ENST00000427710 SEC22BO75396 215 aa13.72□□□□□ -0.21
RTN4-210ENST00000427710 LYPLA1O75608 230 aaPredicted RBP13.72□□□□□ -0.21
RTN4-210ENST00000427710 RSL1D1O76021 490 aaKnown RBP13.72□□□□□ -0.21
RTN4-210ENST00000427710 PDE9AO76083 593 aa13.72□□□□□ -0.21
RTN4-210ENST00000427710 CBX7O95931 251 aa13.72□□□□□ -0.21
RTN4-210ENST00000427710 LDLRP01130 860 aa13.72□□□□□ -0.21
RTN4-210ENST00000427710 TACR1P25103 407 aa13.72□□□□□ -0.21
RTN4-210ENST00000427710 PIGAP37287 484 aa13.72□□□□□ -0.21
RTN4-210ENST00000427710 ETV4P43268 484 aa13.72□□□□□ -0.21
RTN4-210ENST00000427710 DNASE1L1P49184 302 aa13.72□□□□□ -0.21
RTN4-210ENST00000427710 PLGLB1Q02325 96 aa13.72□□□□□ -0.21
RTN4-210ENST00000427710 ZNF791Q3KP31 576 aaPredicted RBP13.72□□□□□ -0.21
RTN4-210ENST00000427710 C4orf17Q53FE4 359 aa13.72□□□□□ -0.21
RTN4-210ENST00000427710 SH2D4BQ5SQS7 431 aa13.72□□□□□ -0.21
RTN4-210ENST00000427710 PRAMEF20Q5VT98 475 aa13.72□□□□□ -0.21
RTN4-210ENST00000427710 KANK2Q63ZY3 851 aa13.72□□□□□ -0.21
RTN4-210ENST00000427710 NOXRED1Q6NXP6 359 aa13.72□□□□□ -0.21
RTN4-210ENST00000427710 GALNT18Q6P9A2 607 aa13.72□□□□□ -0.21
RTN4-210ENST00000427710 Q6ZSR9 355 aa13.72□□□□□ -0.21
RTN4-210ENST00000427710 DDIASQ8IXT1 998 aa13.72□□□□□ -0.21
RTN4-210ENST00000427710 LRRC25Q8N386 305 aaPredicted RBP13.72□□□□□ -0.21
RTN4-210ENST00000427710 VWA5B2Q8N398 1253 aa13.72□□□□□ -0.21
RTN4-210ENST00000427710 ZNF441Q8N8Z8 693 aa13.72□□□□□ -0.21
RTN4-210ENST00000427710 FAM13CQ8NE31 585 aa13.72□□□□□ -0.21
RTN4-210ENST00000427710 OR2M7Q8NG81 312 aa13.72□□□□□ -0.21
RTN4-210ENST00000427710 OR10G3Q8NGC4 313 aa13.72□□□□□ -0.21
RTN4-210ENST00000427710 OR52R1Q8NGF1 315 aa13.72□□□□□ -0.21
RTN4-210ENST00000427710 OR52N2Q8NGI0 321 aa13.72□□□□□ -0.21
RTN4-210ENST00000427710 OR9A2Q8NGT5 310 aa13.72□□□□□ -0.21
RTN4-210ENST00000427710 C16orf52Q8NHV5 167 aa13.72□□□□□ -0.21
RTN4-210ENST00000427710 GFM2Q969S9 779 aaKnown RBP13.72□□□□□ -0.21
RTN4-210ENST00000427710 ADIPOR1Q96A54 375 aa13.72□□□□□ -0.21
RTN4-210ENST00000427710 EGLN2Q96KS0 407 aa13.72□□□□□ -0.21
RTN4-210ENST00000427710 PSMG3-AS1Q96PY0 264 aa13.72□□□□□ -0.21
RTN4-210ENST00000427710 DEFB127Q9H1M4 99 aa13.72□□□□□ -0.21
RTN4-210ENST00000427710 ZNF395Q9H8N7 513 aaPredicted RBP13.72□□□□□ -0.21
RTN4-210ENST00000427710 LRTM1Q9HBL6 345 aa13.72□□□□□ -0.21
RTN4-210ENST00000427710 SIRT5Q9NXA8 310 aa13.72□□□□□ -0.21
RTN4-210ENST00000427710 TRAF6Q9Y4K3 522 aa13.72□□□□□ -0.21
RTN4-210ENST00000427710 DNAJC15Q9Y5T4 150 aa13.72□□□□□ -0.21
RTN4-210ENST00000427710 PHF3Q92576 2039 aaKnown RBP13.71□□□□□ -0.21
RTN4-210ENST00000427710 SLC28A1O00337 649 aa13.71□□□□□ -0.21
RTN4-210ENST00000427710 PIP5K1BO14986 540 aa13.71□□□□□ -0.21
RTN4-210ENST00000427710 ASNA1O43681 348 aa13.71□□□□□ -0.21
RTN4-210ENST00000427710 ITM2AO43736 263 aa13.71□□□□□ -0.21
RTN4-210ENST00000427710 ATP1B1P05026 303 aa13.71□□□□□ -0.21
RTN4-210ENST00000427710 STSP08842 583 aa13.71□□□□□ -0.21
RTN4-210ENST00000427710 DRD2P14416 443 aa13.71□□□□□ -0.21
RTN4-210ENST00000427710 CNR1P21554 472 aa13.71□□□□□ -0.21
RTN4-210ENST00000427710 GPX3P22352 226 aa13.71□□□□□ -0.21
RTN4-210ENST00000427710 SERPINB4P48594 390 aa13.71□□□□□ -0.21
RTN4-210ENST00000427710 FBXW4P57775 412 aa13.71□□□□□ -0.21
RTN4-210ENST00000427710 ZNF763Q0D2J5 394 aa13.71□□□□□ -0.21
RTN4-210ENST00000427710 MAP4K2Q12851 820 aa13.71□□□□□ -0.21
RTN4-210ENST00000427710 MPP2Q14168 576 aa13.71□□□□□ -0.21
RTN4-210ENST00000427710 KIAA0040Q15053 153 aa13.71□□□□□ -0.21
RTN4-210ENST00000427710 C3AR1Q16581 482 aa13.71□□□□□ -0.21
RTN4-210ENST00000427710 GALNTL6Q49A17 601 aa13.71□□□□□ -0.21
RTN4-210ENST00000427710 HLA-DQA1Q5Y7H0 255 aa13.71□□□□□ -0.21
RTN4-210ENST00000427710 DESI1Q6ICB0 168 aa13.71□□□□□ -0.21
RTN4-210ENST00000427710 FAM71E1Q6IPT2 247 aa13.71□□□□□ -0.21
RTN4-210ENST00000427710 ANKRD26P1Q6NSI1 321 aa13.71□□□□□ -0.21
RTN4-210ENST00000427710 FGD2Q7Z6J4 655 aa13.71□□□□□ -0.21
RTN4-210ENST00000427710 TICAM1Q8IUC6 712 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms